Trematomus bernacchii (emerald rockcod): 117491894
Help
Entry
117491894 CDS
T09643
Symbol
si:ch211-1e14.1
Name
(RefSeq) UPF0606 protein KIAA1549 isoform X1
KO
K28284
UPF0606 protein KIAA1549
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tben03037
]
117491894 (si:ch211-1e14.1)
Cilium and associated proteins [BR:
tben03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117491894 (si:ch211-1e14.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1549
Motif
Other DBs
NCBI-GeneID:
117491894
NCBI-ProteinID:
XP_033997900
LinkDB
All DBs
Position
Unknown
AA seq
1754 aa
AA seq
DB search
MAGLVSSVGLVVMLKALMHAHGQRAVFLGMMVLVTVIAADSPVADESLLDSTQHPVGFRG
HVPSSTGFQPLALPASHHTAFESPDSPGTLPSISEPNHEVRTGGVSRFQWGRVASEKSFT
ASDLIAEEPHPLSSPSLSPSEPISGSSSQFESPAKLSSDWKLASTKSAKQSSSLAQPQSN
ISTASLSPSALTRSPPPQLGLNSKQKETFSKQQDGPSEQTLEIMTSFPAQPLEPLKLAFP
DFVADDSKILDVNQLSPSSSPLEESGPTRDINTLPNPDEVLAPGYNVPFIAPHLASPSSE
PTEISPEEFYPTNTMDFDWGSGDYLETMSYLNADGEDYALVTKVPADSYDLEDYTESYDT
SFPSRVGIFPSSLNPLHVSPSSSFTTAYHTIVPFQSIHPSSSSSTIQDTLDPTPSANSDI
PDASDVDWGDTFTIQPTDVLLPDMNSLEYYTTQLTKENSSDAGAEHKGNVTVVSISPTEL
TPTNSITNDTKLTEDESSGDLSGFEPQNDSTPAPTTEQSPQLVNASEPFLDPSITPSHYF
DPSSVWGGESTTVWPAQSPTVGLTESMLPSTTPLLPDDVMSPSSLTDVHWFVTEPYPSET
INTSFVLTATIAFSPVPTDPAANTTEGSTELTPQDSPFTTEQTLNITLESTEPTPNVTLV
PPVLLGDQGVTENGVDITATMTLIPTSSEANTVSTAPTTPTATITSHQASTGDPATTEAS
TSVNIPSVTTKAPTTTPTSRQYLCNLERPAYLVKIGFPFGATVGYAKSQVRDILKGEFNK
SVELQVVDPPPKFVFRVVSGPVVYTAISVINALRRSGRRFLSVSPNWATPDSKYQVHTVL
QFVPAPIDVRYCNFSESIEKGLTMAFAEMRRRSKESTNFTVHIINITMAAPKNQEQRLVR
QPVDITFTVRVSRGYLMGSEVSNALMKLTMVEFSYYMGFPVLQIAEPFHYPELNTSHLLR
STWVRTVLIGVLDQKVSERTFQANMERRVAMLLGEATGLIRRVKRATLIGNSSVQVVSAS
RLVGADHPLEIVYFVEGPSGERMPADQTAALLNSLDVQRAAIVLGYRVQGILAQPMEKVA
SSPSDAENTNTWIVIGVVIPLLVVIVIISILYWKLCRTDKLEFQPDAMTSIQQRQKLQAP
SVKGFDFAKLHLGQQSKDDVMVIQEAVQPGPGPGPLPLCFKDGFSPSENGEIPTPLSKAS
TKASRSSRRRDRISPSDGDSVVSDHSSERESTEENLRAHATHSDRKQTHKLPINVLNGPP
PMNGTNEQLSSAAIFEHVDRMSRAADASRRLPNKIQLIAMQPMALPPLHSPPINGKLSDP
NQINKEIQVALRHKSEIEHHRNKIRLRAKRKGHYDFPTMDESTNGHGDAKDQDRIYQKAQ
TQIDKILDPDAQTPSFFMDSKRSGRGRRSPKQRMKEQLIGGMMEADKDHLISEDNDAVYR
KCPGVNNVAYISDPDQGPGSPHSSSSPTDDVFLGPACSPPGHAPPPPPYMPPQPSIEEAR
QQMHSLLDDAFALVSPTSQGSTAGITLPGVNSNPPLSSPPGRGPRPWGPSYQAHGPFPGR
FTDLSPPPIQGLISRQGLGSSYLPPGDTAGQCEPLPPDSLYSSRGLYAAELPSSARPRPV
GGGSTGAQLHHLTQVGLSSRMNGYPAGVRPAPGQNGGLGWNHYHGDNYSRAEPEKDSFLD
CPDYTSCSIFQTPRGGIREPSAPPVHLDISGMDYLSAPLDTSPPNHSSASLIKAIREELL
RLSQKQAAAPSYHS
NT seq
5265 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtttagtctcctctgtgggtttggtggtgatgctcaaggctctcatgcatgcc
catggccagcgtgcagtgttcctggggatgatggtgttggtaacagtaatcgcagctgac
tcacctgttgcagatgagtctctcttggactccacacaacaccctgtgggatttcgtgga
catgttccaagttcaacagggttccaaccattggccttaccagcctcacatcacactgcc
tttgagagcccagactcacctggtaccctgccatccatttctgaaccaaaccatgaagtt
agaactggtggagtgtcacgttttcagtggggacgtgttgcttctgagaaatccttcaca
gcaagtgacctcattgcagaagaaccacaccctctttccagtccctcattaagcccctcc
gaacccatatcggggtctagttcgcaatttgaatcaccagctaaactctcttcggactgg
aagctggccagcacaaagtcggccaaacaatcctcctctctcgctcagcctcagtcgaat
atatccacagcgtcattaagcccctctgctctcacaaggtcgccaccacctcagcttggt
cttaattctaagcagaaagaaaccttcagcaagcagcaggatggtccatcagagcaaaca
ctggaaatcatgacctcatttcctgctcagcctctcgagccccttaaactggccttccct
gactttgtggcagacgatagtaaaatactggatgtgaaccagctgagccccagtagttcc
cccttagaggagagcggaccgacacgtgacattaacacgctacccaacccagatgaggtt
ctggcccccggctacaatgtgcctttcatcgccccacaccttgcgtctccttcatctgaa
cccactgagatctctccggaggaattctaccccaccaacaccatggacttcgactggggg
tctggggactacttggagacgatgtcatacctaaacgcagatggggaggactacgctctg
gtcaccaaggtgcccgctgactcgtatgatctagaggactacacagaaagctatgacaca
tcgtttccttcaagagtgggcatatttccttcgtccttgaatcctcttcacgtctcacca
tcttcgagcttcacgacagcgtaccataccattgtcccatttcaatccatacatccttct
tcttcgtcctctacaattcaagacacactggaccctactccttccgcaaacagcgatata
cccgacgcatcggacgtagattggggcgatactttcacgattcaaccgacagatgtcctg
ttgcccgacatgaacagcttggagtattacaccactcagttgaccaaggagaacagttca
gacgcgggagctgaacacaaagggaacgttaccgtggtttccatcagccctacagaactc
acacccacaaacagcatcaccaatgataccaaattaactgaggatgagtcctctggtgat
ctgtcaggatttgagcctcaaaatgactcaaccccagcaccaaccacagagcagagtcct
cagctggtcaatgcctcggagccgtttctagatccttccataaccccaagccactacttt
gatccctcttcggtctggggtggcgagtctaccaccgtttggcctgcacaatctccaact
gttggcctaacagaatccatgttacccagtacaacgcctctgctgccagatgatgtaatg
tctccctcctctctgacagatgtccattggtttgttacagagccgtacccatcagaaacc
attaacaccagttttgtcttaactgcaactatagccttctcccctgttcccactgaccct
gctgccaacactacagagggttcaacagaattaactccccaagactctccttttacaacc
gaacaaactctcaacatcacgttagagtcaactgaacccacacccaatgtcactttggtc
cctccagtcctgttgggggatcagggggtgactgaaaatggagttgacatcacagccaca
atgaccttgatcccaactagcagtgaagctaatacagtctctactgcacccacgacccca
actgccaccattacttcccatcaagcctcgactggagatcctgccaccacagaagcctca
accagtgtcaacatcccttctgtcaccacaaaggccccaactacaacaccaacatctcga
cagtatctctgcaacctcgagaggcctgcttatttagttaaaattggtttccctttcggg
gccacagttggatatgccaaatctcaagtgagagacatactgaaaggggaattcaacaag
tctgtagagctgcaggttgtggaccccccaccaaagtttgtgtttcgggtggtgtctggt
ccagttgtgtacacagccatatcagtcatcaacgctctgcgaaggtctgggcgccgcttc
ctgtctgtgtctcccaactgggcgacaccagacagtaaataccaagtccacacagtgctg
cagtttgttcctgctcccatagatgtgcgctactgcaacttcagcgaaagcattgagaaa
ggcttgaccatggcctttgcagaaatgcggcggcgctcaaaggagtcaaccaacttcaca
gtgcacatcataaacatcaccatggcagctccgaaaaatcaggaacagcggctagtgagg
cagccggtggacataacgttcactgtgcgcgtctccaggggttacctgatggggtcagag
gtcagcaatgccctgatgaagctcacaatggtggaattcagctattacatgggctttcct
gtactgcagattgctgagcctttccattatccagagttgaacaccagccacttgcttcgc
tccacctgggttagaacagtgctcattggtgtgctggaccagaaagtgagtgagaggacc
ttccaagccaacatggagcgccgggtggccatgctcctcggagaggcaacgggattaatc
agacgcgttaagagagccacccttataggcaacagcagtgtccaggttgttagtgcgagc
cggctggtgggtgcggaccatcccttggagatagtgtactttgtggagggtcccagtggt
gagaggatgcctgcagatcaaacagcggccctgctcaacagcctggacgttcaaagggcc
gccatcgtcttgggatatcgtgtccagggcattttggcgcagcccatggagaaggtggcg
tcctccccctccgacgctgagaacaccaacacgtggatcgtcattggcgtggtgattccc
ctcctcgtggtcatcgtcatcatttccatcctgtactggaaactgtgtcgcacagacaag
ctggagttccagccagacgccatgacctccatccagcagaggcagaagttgcaggctccc
agtgtgaaaggcttcgactttgccaagctgcaccttggccagcagagtaaggatgatgtc
atggtgatccaggaggcggtccagccagggcccggccccggacccctccccttatgcttt
aaagatggcttcagtccgtctgaaaacggggagatccccacacctttatccaaagcctcc
accaaggcgtcacgcagcagcagaaggcgagataggatctctccgtctgacggggactcg
gtggtaagtgaccactccagcgagcgtgaatcgacagaggagaacctgagagcgcacgcc
acgcacagcgacagaaagcagacgcataagctccccatcaatgttttaaatggtcctcct
cctatgaatggcacaaacgagcagctgtcctcggccgccatctttgaacacgtcgatcgg
atgtctcgcgcagcagatgcaagcagaagactccccaacaaaatccagctcatcgccatg
cagcccatggccctccccccactgcacagcccccccatcaacggcaaactgtccgaccca
aaccaaatcaacaaagagatccaggtggcactgaggcacaagtccgaaattgagcaccat
cgtaacaagatccgtctgcgtgccaagaggaagggccactatgacttccctaccatggat
gaatccacgaatggccacggagatgctaaggaccaggatcgcatctatcagaaagctcag
acccagatcgataagatcctggaccctgatgcccagacgccctccttcttcatggactca
aagagaagtggtcgagggaggcgctcgcccaaacagaggatgaaggagcagctgatcgga
ggcatgatggaggcagacaaagaccacctcatctctgaagacaatgatgctgtgtacagg
aagtgtcctggagtcaacaatgtggcctacatatcggaccctgaccaaggcccaggctcc
cctcacagcagctcctcccccaccgatgacgtgttcctcggccctgcttgctctccaccg
ggccatgcccctcccccgcccccctacatgcctccacagccctccatcgaggaggcgcgg
cagcagatgcactccctgctggacgatgccttcgccctggtgtcgcccacctctcagggc
agcacggcaggcatcactctgcccggagtcaacagcaacccccccctctccagccccccg
ggcaggggccccagaccgtggggtccgtcctaccaagctcatggccctttccctggtagg
ttcactgatctgtcccctcctccaatccaaggcctgatatccaggcagggccttggctcc
agctacctgccaccaggagacacagcagggcagtgtgagccgctcccacccgacagcctg
tactccagcaggggcctctacgccgccgagctgccctcatctgccagaccccgaccagtg
gggggggggtccacaggcgcccagctccatcatctcacacaggtgggattgtccagtcgg
atgaatggttacccagcgggggtcaggcccgctccggggcagaacggaggcctcggctgg
aaccattaccatggcgacaattactccagggcagagcctgagaaagattcattcctggac
tgtcctgactacacgtcctgctctatcttccagacgcccagaggtggtatcagggagccc
tcggcgccccctgtccacctggacatctcggggatggactacctgtcagcgcccctggat
acgtctccacctaaccactcctccgcctccctgatcaaggccatcagggaggagctgctg
cgcctctcccagaagcaggccgccgcgcccagctaccacagctga
DBGET
integrated database retrieval system
