Trematomus bernacchii (emerald rockcod): 117491897
Help
Entry
117491897 CDS
T09643
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117491897 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117491897 (myo5c)
04131 Membrane trafficking [BR:
tben04131
]
117491897 (myo5c)
03029 Mitochondrial biogenesis [BR:
tben03029
]
117491897 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117491897 (myo5c)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117491897 (myo5c)
mRNA cycle factors
P-body specific factors
117491897 (myo5c)
Membrane trafficking [BR:
tben04131
]
Others
Actin-binding proteins
Myosins
117491897 (myo5c)
Mitochondrial biogenesis [BR:
tben03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117491897 (myo5c)
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117491897 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
117491897
NCBI-ProteinID:
XP_033997906
LinkDB
All DBs
Position
Unknown
AA seq
1744 aa
AA seq
DB search
MALLELYTEYNRVWIPDAGHVWRSAEILRDFHLGDNVLDLLLEDGTENHYPVDPAKPQLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKIIYTYCGIILVAVNPYKQLHIYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEIGFDRRYRIIGANMR
TYLLEKSRVVFQADNERNYHIFYQMCSCAHLPEFKNLKLLSADEFAYTCMGGEITIEGVD
DEKDMEETRRTFSLLGLMEDFQSDVFKVLAAVLHLGNLEIKNSGDGKSSVPPSDPHLAVF
CELLGVSAEGLARWLCHRRIVLVAETVVKPVPKERAVNARDALAKQIYAHLFDCIINKIN
TALQVPGKQHAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDRSWLQKLFKYLDANPLFEKP
RLSNEAFVIQHFADKVEYQCRGFLEKNRDTLYEELVDILRVSEFPFVANFFQEEKQKPVT
TKVVKVRPARPVVKPANKQQRASVGDKFCSSLSLLMETLNATTPHYVRCIKPNDEKLPFE
YDSRRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSHQEGDLSDKKQTCKNV
LQRLIQDSNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTLQKHVRGWSKRRKFLRMR
EAAIILQQYIRGTKTIRKTVTAAALKQGWAALVIQRCWRGYRMRQIFHLVRVATVTIQSF
TRGWIARKRYKKMVEEQKALILQKYARAWLARRRFQTMRRLVINVQLSFRVQQLRKKIEE
QNKENRGLMERLSSLANSHSHTVDRLHGLEAQLEKSTNQKVSLEAREKKVKEDARQQITT
QLQKEIDALKLEKQNLEKKFDASSKEAKESFDHMKTNLQEEKEHEARFRNRVAENNIEIQ
RIDHEKEVETLKEGIKRLKEERVSLQRKIEEGDQVNADLQEQVIQLTKHVKIIPELRKDL
NNLQNQRNNMDRKMKEQSEQARAKMNDITRQLLGGIVEENVLLGLTPDDSEKICEVEDLL
AAFDGLQKATRILENHQREQKEGCETQVEGFKLKVDHLENENSKLQNLFQEKSNVNENIR
QELSRLSSENSVIPELKVQALELQRQKQDLEARVEEQSRELTDKTEEITNVLQKKIQEES
SQRRHFEEKSEELEELKRELKGRVEELGEENDHLKRQLQMESEAKSKLRQETSQLTADNM
DFEEQLDQKDRLIKKLQKQMKSLETSQRAKQTSAPAIPKDFLGMLEYKREDESRLIQNII
LDLKPKGVVVNMIPGLPAYILFMCVRHADYLNDEVKLKTLMNGVIGAVKKVIMSHHKDFE
LLSFWLSNMYQLLNCLKQYSGEEEFLKENTPCQNKHCLQNFDLSEHRQILSDLAIQIYHQ
FISIMEKTLSPAIVPGMLEHESLQGISSMKPTGFRKRSNSIYEDSETHTISSIVQQLSVF
QSTMSQHGMEQRLIKQAVKQMFYQVGATTLNNIMLRKDMCSCRKGMQIRCNISYLEEWLK
EKELQSSNAMDTLKPLSQAAWLLQVNKSTDEDAKEITGTCTELNPVQIVKILNSYTPIDD
FEKRVTSSFVRKVQSLLQDRDGSTQLMLDSDYRFQVTFPFCPSAQALELLQVPSSLHLGF
LSRI
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atggctctgttggaactctacaccgagtacaacagagtgtggataccagacgcaggtcat
gtgtggagatcagctgagattctgagagactttcatcttggagataatgttcttgacttg
cttcttgaagatggcactgagaaccactaccctgttgacccggcaaaaccacaactccct
cctcttcgcaacccggacatcttggtgggggagaacgacctcacggctctcagctacctg
catgaacctgcagtcctgcacaaccttaaagtgcgctttgtggagtccaaaatcatctac
acctactgtggtattatactggtagctgtaaatccttacaaacagcttcatatctatgga
gatgcaatcattcatgcctactcaggccagaacatgggagacatggaccctcacatattt
gcagtagcagaggaagcatacaaacagatggccagaaaccacaagaaccagtccatcatc
gtcagtggtgaatctggagccgggaaaacagtgtctgctcggtacgctatgaggtacttt
gctgttgtaagcaaatctggaagtaagactcgagttgaagacaaagttctggcatccaat
ccgataacagaggcaataggaaatgcaaagaccaccaggaatgacaacagcagccgtttt
gggaaatacacagagatcggctttgacaggcggtaccggatcattggagcgaacatgagg
acctatctcttagagaaatccagagtcgtttttcaggcagacaacgagcgaaactatcac
atcttctaccagatgtgttcctgtgctcacctgcctgagttcaagaatctaaaactgttg
agtgcagatgagtttgcgtacacctgcatgggcggtgagatcactattgaaggtgtggat
gatgagaaagacatggaggagactcggcggaccttctcactcctgggattgatggaggac
tttcagtcagatgtgttcaaagtgttggcagcagttctgcatttggggaatttggaaatc
aaaaactctggagatggaaaatcatcagttccacccagcgatccacacctggcagtcttc
tgtgagttgctgggtgtgagtgcagagggtttggctcgctggctgtgccaccggaggatt
gttctggtggcggagacggtggtgaagccggtgcccaaggagcgggctgtaaacgccaga
gatgccctagccaagcagatctatgcccacctgtttgactgcatcatcaacaagataaac
acagcactgcaggttccaggaaagcaacacgctttcattggtgttctggacatttatggg
tttgaaacatttgacatcaacagctttgaacagttttgtatcaactatgcaaatgagaag
cttcagcagcagtttaacttgcacgtgttcaagctggagcaagaggagtacatgaaagag
gacatcccatggacgttgatagatttctatgacaaccagccggtcattgacctgattgaa
gcaaagatggggatcctggacttgcttgatgaagaatgtttgtttcctcagggcacagat
cgaagctggctgcaaaagctcttcaaatatctcgatgccaaccctctgtttgagaagccc
aggttatcaaatgaggcgtttgtgattcaacactttgccgacaaggtggaatatcaatgc
agaggctttctagaaaagaacagagacactctctatgaggaactggttgacattttgaga
gtcagtgagtttccttttgtggccaactttttccaagaggagaagcaaaaacctgtgacc
acgaaagttgtcaaagtgaggcccgccagacccgtagtgaaaccagccaataaacagcag
agagcctcagtgggagataagttctgcagctccctctctttactgatggaaacactgaat
gctaccacccctcattatgtgcgctgcattaagcccaatgacgaaaagctcccatttgaa
tatgactccaggagggtggtgcagcagctgcgagcctgtggagtcctggaaactattcgt
attagtgcacagagctatccctccaggtggacatacattgagttttacagccgatacagt
atcctaatgtcacatcaggagggagacctcagtgacaagaaacagacctgcaagaacgtg
ctgcagaggttgattcaggactccaaccagtacaagtttggtcggacaaagatcttcttc
cgggctggtcaggtagcttatctggagaagctgcgtctggaccggctgagaggagcctgt
gtgaccctgcagaaacacgtccgcgggtggagcaagaggaggaagttcctgcgcatgaga
gaggcggccatcatcctgcaacagtacatccggggaacaaagacaatccgtaaaacagtg
actgctgcggctctgaagcagggctgggcagcgctggtgatccagaggtgctggagaggt
taccgcatgagacagatcttccatttagtccgtgtggccaccgtcaccatccagtccttc
acacgaggctggattgcccgtaaacgctacaaaaagatggtggaggagcagaaagccctg
attttacagaagtacgcccgagcatggctggcacggcggcgttttcagaccatgcgtcgg
ctggtgatcaacgtccagctctccttcagggtgcagcagctcaggaagaagattgaagag
cagaacaaagagaaccgtggactgatggaaagactctcaagcttggccaactcccactct
cacaccgtggacaggctgcacggtctggaggcgcaactggaaaaatcaaccaaccagaaa
gtgtctttggaggccagagagaagaaagtgaaagaagatgctcgccagcagataacaaca
cagcttcagaaggaaatagatgcactcaaacttgagaagcagaacttggagaaaaagttt
gacgcttcttccaaagaagccaaagagagctttgaccatatgaagacgaatcttcaggaa
gagaaagaacatgaagcaaggtttagaaacagagttgcagagaacaacattgagatccag
aggattgaccacgagaaggaggtggaaactctgaaagaggggattaagagattgaaagag
gagagagtcagcctgcagagaaagatcgaggagggggaccaggtgaacgctgacctacag
gagcaggtcatccaactcaccaaacatgtcaaaatcattcccgagctacggaaggatctc
aacaacctgcagaaccagagaaataacatggaccggaagatgaaagagcagtcggaacaa
gccagagctaaaatgaacgatatcacgagacaacttcttggtggtatcgttgaagagaac
gttcttttggggctaactccagacgactctgagaagatctgtgaagttgaagatttgctg
gcagcctttgatggtcttcagaaagctaccagaatcctggaaaaccaccagagggagcag
aaggagggctgtgagacccaagtggaaggctttaaattgaaagtggaccaccttgaaaat
gagaacagcaagttgcaaaacctgttccaggagaaaagtaacgtcaacgagaacattcgc
caagaactgtccaggctcagcagcgagaactcagttatcccggagctgaaagttcaggct
ttagagcttcagagacaaaaacaagatttggaggcccgtgtagaggagcagagcagagaa
ctaacagacaaaactgaagagatcacaaacgtgcttcaaaagaagattcaagaagagagc
tcacaacggaggcactttgaggagaaaagtgaagagctggaggagttgaagagggagctc
aaaggcagagtggaggagctgggagaggagaacgatcacttgaagagacagctgcagatg
gagagcgaggccaagagcaaactgagacaggagacttcacagttaaccgctgacaatatg
gactttgaggagcagctcgaccagaaagaccgattaataaagaagctccagaagcaaatg
aaaagccttgaaacatcacagagagcaaagcaaacgtctgcgcctgcaatccccaaagac
ttcctcggcatgttggagtacaagagagaggatgaatccagactcattcaaaacatcatt
ctggatctgaagcccaaaggtgtggtggtcaacatgatccccgggctgccggcttacatc
ctcttcatgtgcgtgcgccacgccgactacctcaacgatgaagtcaaactcaagactctc
atgaatggagtcatcggtgctgtcaaaaaagtcatcatgagtcaccacaaagactttgag
ttgctgtccttttggctctccaacatgtatcagctgctcaactgtctgaagcagtacagc
ggggaggaggagttcctaaaagaaaatactccctgccagaacaaacactgcctgcagaac
tttgatttgtctgaacacagacagattctcagcgacctggccattcaaatctaccatcag
ttcatctcaatcatggagaagaccctctctcctgcaattgttcctggtatgctggagcac
gagagtctacaagggatttccagcatgaagccgacgggttttagaaagcgttcgaacagc
atctacgaggactcagagacacacaccatctcctccatcgttcagcagctcagtgtcttc
caatccaccatgagccagcatggcatggagcagcgcctcatcaaacaggctgtcaaacaa
atgttctaccaagtgggagcgaccaccctcaacaacatcatgctgcgcaaagacatgtgc
tcctgcaggaaggggatgcaaatcaggtgtaacatcagttacctggaggaatggctgaag
gagaaggagctgcagagctcgaatgcgatggacactctgaagccgttgtctcaggccgcc
tggctgctgcaggtcaacaagtccaccgacgaggacgccaaggagatcaccggcacatgc
actgaactgaaccccgttcagattgtcaagattctgaactcctacacccccattgatgat
tttgagaaaagagtgacgtcgtcatttgtccgaaaagttcagtcgttactacaagatcgt
gacgggtccacgcagctgatgctggactcagattatcgtttccaggtcacgtttcctttc
tgcccgtccgcgcaggccctggagctgctgcaggtccccagcagcctccacctgggcttc
ctctccaggatctga
DBGET
integrated database retrieval system
