Trematomus bernacchii (emerald rockcod): 117491898
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Entry
117491898 CDS
T09643
Name
(RefSeq) DNA-binding protein RFX7 isoform X1
KO
K09175
DNA-binding protein RFX7
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117491898
Transcription factors [BR:
tben03000
]
Eukaryotic type
Other basic domains
RF-X
117491898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
117491898
NCBI-ProteinID:
XP_033997910
LinkDB
All DBs
Position
Unknown
AA seq
1479 aa
AA seq
DB search
MADDQQQPGLKPASGLGSLPALVPGLQGPEANALQFKIKNSICKSVQSKVDSILQDVEKF
TDIEKLYLYLKLPSGPSSGNDKSFPISIHHPNPQILPIWTENERGSSTPGLCDQSSMSSS
RTQQMYAFNWIRNHLEEHPETSLPKQEVYDEYKSYCDNLGYNPLSAADFGKIMKNVFPNM
KARRLGMRGKSKYCYSGLRKKAFVHMPSLPNLDLQKSGDGCELMEPSGQSPSAEDDMRSA
ACGLVCEWAQKVLSRQFDHVEDLARFLLNSHYIGTKSMAALTVMTGTPTGMKTPTPSSAF
VPTAETNSFQPQMKTLPSPSIDAKQQLQRKIQKKQQEQKLHSPLPSEAQMKRTEASTPGP
IMPCGSPALLSPQPTIGIVVAAVPSPVTVQRGRQLMTSPSPIGTAEGKVLPVNFQVVTQS
LKQSPKHPQNISASPVGDRMARHGTRYAQILPKPSATGAITLRSPPTLLITNSPIKTVMP
TPHVSSVNVVKMTAIALAPSSSSTTGRPASAGVNTIAALDESMQFHGAFSTASQSSAIRP
NAVVATAILSTDTKVTYAAGNDNNHGHGTEKMASGERMAKFRAASEPSFLIKCSPGPDRG
ARGKSDHMSTFISVSAAGTRDSNNSNCHDSTLYLTVDNQNSIGSSAVTPMTKDPCLDAKS
PRKRTGGESHVIPVKRVFISQQPLTIIDNPKPASLKRIPRPGTPARPESAPCKVTVKHSS
IRPTQILALSDSPITHTQGSQTVVKPQALVLKREERSLSADTSTSDQALLRQITGGPHAL
AANSGAHEASVMSHLKSTIWEEGQLDELRKQAFAQQIPAEHKQAPTDQLSLIAQPSEASG
QLTLTQEMVDFAGSQPNMDYFPFNDDDMTQDSIVEELVQMEEQMKLKGLFNSCVDVSLQS
QSASSQGSMLNAHQAGSNFFHSVHSSTTPVQTPTPTPTPTPTPTSEMTLGHSMTRESPCS
RMAPITPVDGAMGRHTPISTPLSNCSSSVPPSPVECRNPFAFTPINSSITGYHDASIVSS
SPVKPMQRPMATHPDKAKLEWINNRYNSNSTGPLPNHSIGILPSYQDLVDDQFRKPHAFA
IPGQSFQAQTRQDASHFGRLTPISPVQQQQQQQQLIGVTTPTKQESFAVPAPLDNKASTS
SASSTFRCRSVSPAVRQRNSSGNTGPQTCTTNTTTTTPTVVSPFNSPITAEVLNILSNSQ
RVSSVHSMVQRSQSVPLNIMMQSEMMPVQGQSNTAKITNVLLSKMEADGDDSVRGLGINN
LPSNYTARMNLTQILETTPGFSGGTAHQNLLPVSSSPAAFEMQQHGYLNSGSGEQVSFST
GDSQAQAGPGKQDQQQQLQENPVQTQSQLLLQSTQQQEVEDEQQQLDFNNTVKDLLGHDG
LNPSSQLVGQVASELNAVASDFSNDMRLTSDLSSSITDLNTLDTNLLFDPNQQQEQYEDS
TLEELKNDPLFQQICSDTVNSGFDWLESKDQPTTVEMLG
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatcaacaacaacctggtctgaagcctgcctcgggattaggctctcttcca
gcgctggtgccaggactccaggggcccgaggctaacgcgttacagttcaaaataaagaat
tccatttgcaaatctgtacaatcaaaagtggacagcatattgcaagatgttgagaagttt
acagacatcgaaaaactctacctctacctgaagttgccttctggtcccagcagtggcaat
gataaaagtttccccatatctattcatcaccccaacccccaaattctgcccatttggact
gagaatgagagggggtcctccactcctggattatgtgatcagagttccatgtcgtcaagc
cgtactcaacagatgtatgcattcaactggatacggaatcacctagaagagcacccggag
acttccctccctaagcaagaggtgtacgatgaatacaagagctattgtgacaatctgggc
tacaacccactgagtgcagcagactttgggaagatcatgaagaatgtctttcctaacatg
aaggcacgccgactgggcatgaggggcaaatccaaatactgttatagcgggttaaggaag
aaagcttttgttcacatgccctccttacccaacctggatctgcagaaatctggtgatggg
tgtgagctgatggagccttcgggacagtccccgagcgctgaggatgacatgagatctgca
gcctgcggactggtgtgtgagtgggcccaaaaggtcctgagtcgtcagtttgaccacgtg
gaggacctggcccgcttcctgctcaatagccactacattggtactaagtccatggctgca
ctcactgttatgaccggaactcccacaggaatgaagacgccaactccatcctctgcgttt
gtgccgacagctgagacgaactctttccagccccagatgaagaccctgccctctccctct
attgatgcaaagcagcaactgcagcgcaaaatccagaagaagcagcaggagcagaagctc
cactcacctctgcccagcgaggcccagatgaagaggacggaggccagcacccccggcccc
ataatgccttgtggcagccccgctctgctgtcccctcagcccaccatcggcatcgtggta
gcagctgtccccagcccagtcacggtacagagaggcaggcagttgatgacctcacccagc
cctatcgggacagcagaggggaaagtgttgcctgtgaacttccaagttgtcactcagtct
cttaaacaatcccccaaacatccccagaacatctccgctagtcctgtgggtgaccggatg
gcacgacacggcacacggtacgcacaaatcctgcccaagccctctgccaccggtgccatc
acgctgcgctccccccccaccctgctcatcaccaacagccccataaaaactgtgatgcca
acacctcacgtcagctcggtgaacgtggtgaagatgacggccatcgctctggctcccagc
agcagcagcacaacagggcgtcctgcctcggcgggtgtgaatacaatcgctgctttggac
gagtccatgcagttccacggtgcgttctcaactgcctctcagtctagtgcaatcagaccc
aatgccgtagtcgccaccgcaatcctctccactgataccaaagtgacgtatgcagctgga
aatgacaataaccacggccatggcacagagaaaatggcttctggggagagaatggctaag
ttcagggccgccagtgagccgagcttcctgattaagtgttctccgggaccagacagagga
gcaagggggaaaagtgaccacatgtccactttcatctctgtatctgcagctgggactcgg
gacagcaataacagtaactgccatgacagtactttgtacctgactgttgataatcagaac
tccattggctcctccgctgttacccccatgacaaaggacccctgcctagatgctaagagc
cccaggaagcgcacaggcggggagtcccatgtgattcctgtgaagagggtgtttatctcc
cagcagccactcactataattgacaatcccaaacctgcttcattgaagaggatccccaga
ccgggaactcctgccagaccagagagtgccccctgcaaagtgactgtgaaacactcctcc
atcaggcccacacagatcctcgcactctccgactcgcccatcacacacacgcagggctcc
cagactgttgtcaaaccccaggctttggtgttgaaacgcgaagagcgttctctcagcgcc
gacaccagcacgtcggatcaggctttgctacggcagatcactgggggccctcacgcttta
gcagccaactcaggagcacacgaagcctctgtgatgagccacttaaagagcacaatatgg
gaggagggacagcttgacgagctccggaagcaggcgtttgcgcagcagatcccagcagaa
cacaaacaagcccccactgaccaactttccctaatagctcagccctccgaggcctcaggt
cagctcaccctcacgcaggagatggtcgactttgcaggttctcagcccaacatggactac
ttcccgttcaatgacgatgacatgacccaggacagcatcgtggaggagctggtccagatg
gaggagcagatgaagctgaagggtctgtttaacagctgcgttgacgtgtctttacaaagc
cagtcggccagcagtcaaggctccatgcttaatgctcaccaggctggctccaacttcttc
cactcggtccacagcagcaccactccggtccaaactcccacgccaactccgaccccaact
cccactcccacctcggaaatgacgcttgggcacagcatgacgagagagagcccctgctcc
cgcatggctcccatcaccccggtggatggagccatgggtcgccacacccccatcagcaca
ccgctttccaactgcagcagcagcgtccccccgagcccagtggagtgcaggaaccctttt
gcattcacgcctattaactcaagtatcacaggttaccacgacgccagtattgtctccagc
agccctgtaaagcccatgcagaggccgatggctactcaccctgacaaagccaaactggaa
tggatcaacaaccgctacaacagcaactccacaggtcctttgcccaaccatagcattggc
attctgcccagctaccaagaccttgtagatgaccagtttcgtaagccgcatgcctttgca
attcccggtcagtcatttcaggctcagacgagacaggatgcttctcactttggccgtttg
actcctatttccccagtacagcagcagcagcagcagcagcagctaataggtgtcactact
cccaccaaacaggagagttttgctgtgcctgcaccgttagacaacaaagcatcaacctca
tccgcgtctagtactttccgttgccgcagtgtcagccctgcagtgcgccagagaaactct
agtggcaacacgggccctcagacctgcaccacaaatacaaccacaaccaccccaaccgtg
gtgtcaccctttaactcccccatcaccgccgaggtgctcaacatactgtccaacagccag
agggtcagctctgtccacagcatggtccagcgtagccaatctgtgcccctgaacatcatg
atgcagagtgagatgatgcctgttcaggggcagagtaacaccgccaaaatcaccaatgtt
ctcctcagcaagatggaggctgatggggacgattcagtccgtggcctgggtataaacaac
ctcccctctaactacacggcccgtatgaacctcacacagatcctggagaccacccctggc
ttctctggaggaacggctcaccagaatctgctgcctgttagctccagccctgctgccttt
gagatgcagcagcatggctacctcaacagcggcagtggggaacaggtgagtttctccact
ggggacagccaagcacaagcgggtcctggtaagcaagaccagcagcagcagctccaggag
aatcccgtgcagacacaatcacagctcctcctccagagcacacagcagcaggaggtggag
gacgagcaacagcagctggatttcaacaacactgtcaaggacttgttggggcacgatggc
ctcaaccccagttcccagttggtgggtcaggtagcctctgagctcaacgctgtggcgtct
gacttctcaaatgacatgagactgacctcagatctgtccagtagcatcactgaccttaac
acgttggacaccaacctgctgtttgatcccaatcaacagcaggaacaatatgaagactca
acactggaagaactgaagaacgacccgctttttcagcagatatgcagtgatactgtgaac
tctggttttgactggctagaaagcaaagaccagccaactacagtagagatgctgggctaa
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