Trematomus bernacchii (emerald rockcod): 117491901
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Entry
117491901 CDS
T09643
Symbol
ap4e1
Name
(RefSeq) AP-4 complex subunit epsilon-1
KO
K12400
AP-4 complex subunit epsilon-1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117491901 (ap4e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117491901 (ap4e1)
Membrane trafficking [BR:
tben04131
]
Endosome - Golgi transport
Others
AP-4 complex
117491901 (ap4e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
AP4E_app_platf
Cnd1
INTS1_R4
HEAT_EZ
MG491_central
Motif
Other DBs
NCBI-GeneID:
117491901
NCBI-ProteinID:
XP_033997913
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MSDVVEKTLTALPGLLSLDSLPGSNKLSSSSKLGNLIRGITELTSKHEEEKLIQRELTSI
KEQVSSPNTSMRQMKELMVRAIYCEMLGYEASFSYIHAIKLAQQGTALEKRVGYLAVSLF
LNESHELLLLLVNTVLKDLQSTNLIEVCMALTVVSQMFPKDMIPAILPLVEEKLNHPKEI
IRRKAVLALYKFYLIAPNQVQHIHNKFRKALCDKDPGVMTASLHIYLQLIEENPEGYKDL
TTSFVTILKQVVGGKLPMDFNYHSVPAPWLQIQLLRILCLLGKNDQSTSEIMYEVLDESL
RRAEINHNITYAILFECVKCIYTIHPKSELLEKAAKCIGNFVLSPKINLKYLGLKALTYV
VQQDPKLALQHQMTIIECLDHPDLIIKRETLELLFRITNAQNVTVIVDKMLEFLRINKDD
YTTIDLVGKVAELAEKYAPDNEWFIETMSTVFSVGGDTMQPDIPNSFLKLLSEGFDSVEE
DRKLRLFAVDSYVSLLQGEPGKLPQRFLQVISWVLGEYSCLRADLEMDTVLRLLAKLLDM
KTTSSETKSWVLMAMTKLCEGGAGVSVARGVSETYSSSLDTVLRQRAQELQHLSQDPELR
AQVLPRHTGLEPLEVDSSLSFLDGFVSEALAAGAAPYKPPHQRQEELAQAKALSLEPYGL
SLPLSMSSCSITDRQSPTLLSISSGLSGNSNDLSHKGGSSSLKLDGVKRVWGREGYLAQR
EPAEVSAHVEVPSTLRSPSQQGGADGSHSQTPTHTPTPEPELEKQQLASSLFVGLGSHSS
VCLMGKSEPTPQRFRRKARSPASSSGASENISNSLVSPPITVDTLMCNNLLDSHITSEPD
VSPLEQTPPLSQGLAAANGSCDEELPDSDVKGSSPSLIGDDALVAADPAPHEEPPKDLLL
SSYLPAELSGLSHSEITPLSSDQSLDLSACHVQKEGDLVLVVFIYNSSDSDIQQILLELD
SDELEVSCECDGAVGGARGHSVAVCQYSLSVKRPSVHVELVGTVSYQFPVGTPQSVQFSY
KLPLSSFIRPLTLSTEEYGTMWLDFSHDTKQNLTLISDDPEPLAASLSVLKKKLQLHVVE
IIGMEGIVACRLLQDQPCLMHCRLHAGTLAVWLRSPVPDLPDCLMYFCQRALQEH
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgttgtggagaaaaccctgacagctctgccgggtctgctgtctctagactcc
ctgcctggatccaataaactgtcctccagctcgaagctaggaaacctcatcagagggatc
accgagctgacctccaaacatgaggaggaaaaactgattcaacgtgagctaacatccatc
aaagaacaagtttcctcccccaacacatccatgaggcagatgaaggagctcatggtgaga
gcgatctactgtgaaatgctcggctatgaggcttcgttcagctatattcatgccatcaaa
ctggctcaacaaggcactgctctggagaaaagagtcggttatctcgctgtgtctttgttt
ctgaatgaaagccatgagctgcttcttcttcttgtgaacactgtattaaaggatcttcag
agcacaaacctcattgaagtgtgcatggctctaactgttgtcagccagatgtttcccaaa
gatatgattcctgcaatccttcctctggtggaggagaaactaaatcacccaaaggaaatc
attcgaagaaaagcagtcctggcactgtataaattctacttaatagcaccgaatcaagtt
caacacatccacaacaagtttcgcaaagctctgtgtgacaaggatcccggcgtcatgacg
gcttcactacacatctacttacagctgatcgaggagaatccagaaggttataaggacctg
acgacaagttttgtcaccatactgaagcaagtggtgggaggaaaactgcccatggatttt
aactatcacagtgttcctgctccatggctgcaaattcagctcctcagaatactgtgctta
cttgggaagaatgaccagagtacaagtgagatcatgtatgaagtcctcgacgagtctttg
cgaagagcagagattaatcataacatcacctatgcaatattatttgagtgtgtaaaatgt
atttacacaattcatcccaaatcggaacttttggaaaaagctgcaaagtgcattggcaac
tttgttctgtcaccgaagattaatctcaaatatctcggcttgaaggccctcacctacgtg
gtccagcaggatcccaaactggccctgcagcatcagatgaccatcatcgagtgtctcgat
caccccgacctcatcatcaagcgtgagactctggagttactctttcggatcaccaacgcc
cagaatgtcacagtcatcgtggataagatgctggagtttctgcgcatcaacaaagacgac
tacaccaccattgacctggtggggaaggtggcagaactggcggaaaaatatgcaccggac
aatgagtggttcattgagaccatgagcacggtgttttcagtgggaggagacacgatgcag
ccggacatccccaacagtttcctgaaactgctgtctgaggggtttgacagcgtggaggaa
gacaggaagttgaggctgtttgctgtggattcgtatgtttctctgctgcaaggagagcct
ggcaaactgcctcagcgcttcctccaagtcatcagctgggtccttggggaatactcctgt
ttgagagcggaccttgaaatggacacagtcctgaggctgctggccaagctgttggacatg
aagaccaccagcagtgagactaagagctgggtcctcatggccatgactaagctctgtgag
gggggggccggtgtctctgtggcccggggggtctctgagacatacagcagctctctggac
acggtgctgaggcagagggcccaggagctgcagcacctcagccaggacccggagctacga
gcccaggtgttaccccgacacaccggcctggagcccctggaggtggattcctctctttca
tttctggatgggtttgtgtcagaggcgttggctgctggcgctgctccatacaagcctccg
caccaacggcaggaggaactagctcaggccaaagcgctgagcctggagccatacggcctg
tccctgcccctcagcatgtcctcctgcagcatcacagacagacagtctcccacgctgctg
tccatcagctccgggctgtcgggcaatagcaatgacctctctcacaaaggaggctcctct
agtctgaagctggatggtgtgaagcgggtgtgggggagggagggctacctggcgcagagg
gaacctgcggaggtgtcagcccacgtggaggtccccagtaccctccggtcccccagccag
cagggaggggctgacgggtcacacagccagacccccactcacacccccacccccgagccc
gagctagagaaacagcagctggcctcgtcgctgtttgtgggcctcggctcccacagctct
gtgtgtttgatggggaaatctgagccgacaccccagcgcttcagaagaaaagccagaagt
cccgcctcatcctctggtgccagcgagaacatatccaactccctggtctctcctccgatc
acagtggataccctgatgtgtaacaacctcctggactcccacatcacctccgagccggac
gtttctcctctggaacagacgccccccctctctcagggcctcgctgctgctaacggctcc
tgtgatgaagagctgcctgacagtgacgtgaagggaagcagcccctctctcattggggat
gacgctctggttgcagctgatccggctccacatgaagagccacctaaagacttgttgctc
agttcttatcttcctgcagaactctctggactctctcactcagaaatcactcctctgagc
tccgaccaaagcctggatctctccgcctgtcacgtgcagaaagagggtgatttagtgctg
gtggtttttatctacaactcctctgactctgacatccaacagattctactggagctggac
tcggatgaacttgaggtgtcctgtgagtgtgacggtgcagtggggggggcgaggggccac
agtgtagcagtgtgtcagtactccctgtctgtgaagagaccttcagtccacgttgaactg
gtcgggacggtttcttaccagtttcctgtcgggacgcctcagtcggtgcagttctcgtac
aaactgcctctctccagcttcatcagaccattgaccctgtccacagaggagtacgggacg
atgtggctagacttctctcacgacacaaagcagaacctgacgctgatcagtgacgaccct
gaacctctcgcagcttctctgagtgtgctgaagaagaaactccagcttcatgtcgtggaa
atcataggcatggagggcattgtagcttgccgtctcctgcaggatcagccgtgtttgatg
cactgtcgcctgcacgccgggactctggccgtgtggctgcgctctccggtccccgacctg
cccgactgcctgatgtacttctgtcagagagccttacaggagcactga
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