Trematomus bernacchii (emerald rockcod): 117492022
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Entry
117492022 CDS
T09643
Symbol
polr1c
Name
(RefSeq) DNA-directed RNA polymerases I and III subunit RPAC1
KO
K03027
DNA-directed RNA polymerases I and III subunit RPAC1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03020
RNA polymerase
tben04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117492022 (polr1c)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
117492022 (polr1c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117492022 (polr1c)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
117492022 (polr1c)
RNA polymerase I system
RNA polymerase I
117492022 (polr1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
117492022
NCBI-ProteinID:
XP_033998042
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MAATMSNVEEIRTRAVLGEFGVKNVHSSDFPGNYPGYDDTWNMQTFQKNFRIDIVNLEEN
SMEFDMVGIDASIANAFRRILLAEVPTMAIEKVFIYNNTSIVQDEVLAHRLGLVPIKADP
RLFEYRNAGEESAEEQGSEIDTIQLQLKIKCSRNPRATKDSSDPRELYLNHMVYSSDITW
VPIGNQADVFADSVIRPVHDDILIAQLRPGQELDIIMHCVKGIGQDHAKFSPVATASYRL
LPEITLLEPVEGEKAERLKRCFSRGVIDIEDVNGTNVAKVVNSRLDTCSREVIRHDDLKN
VVKLARLRDHFIFTVESTGILPPDVLVTEAIKVLMTKCQRFLSELDTPSVE
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaccatgagcaacgtggaagaaatacggactcgagctgtactgggggaattc
ggtgtgaaaaatgtccattcgtcagatttccctggcaactaccctggctatgatgacact
tggaatatgcagacatttcaaaagaacttcaggattgacatagtgaatctggaggagaac
agcatggagtttgatatggtggggatagatgcatccatcgccaacgccttcagaaggatc
ttactggcagaggtgcctaccatggccatagagaaggtgtttatctataacaacacatcc
atcgtccaggatgaagtcctggcccacagattaggcctcgtccccatcaaagcggatccc
cgcctgtttgagtacaggaacgctggtgaagagtctgcagaggaacaaggttcagaaata
gacacaattcagctgcagctaaagatcaaatgcagtaggaacccccgagccaccaaagac
tcctctgacccccgagagctgtatctgaaccacatggtttactccagcgacatcacgtgg
gtccccattgggaaccaggcggacgtgtttgcagactctgtcatcagaccggtgcacgac
gacatcctgatcgctcagctgcggcccggccaggagctggacatcatcatgcactgcgtt
aagggcatcggtcaggaccatgctaagttctctccggtggccacagccagttaccggctg
ctgccagagatcaccctgctggagccggtggagggggagaaggccgagcgcctcaaacgc
tgcttctcacgaggagtcatagacatagaagatgtgaacgggacaaatgttgcaaaggta
gtgaacagtcgcttggacacatgcagcagggaagtgatccgtcatgatgacctgaagaat
gtggtgaagctggccagactgagagaccatttcatcttcacagtggagtccaccggcatc
ctgccccccgacgtgctggtcacagaggccatcaaagtcctcatgaccaagtgtcagagg
ttcctcagtgagctggacactccgagtgtggaatga
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