Trematomus bernacchii (emerald rockcod): 117492026
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Entry
117492026 CDS
T09643
Symbol
gbf1
Name
(RefSeq) LOW QUALITY PROTEIN: Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117492026 (gbf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117492026 (gbf1)
Membrane trafficking [BR:
tben04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
117492026 (gbf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF758
Motif
Other DBs
NCBI-GeneID:
117492026
NCBI-ProteinID:
XP_033998052
LinkDB
All DBs
Position
Unknown
AA seq
1847 aa
AA seq
DB search
MVDKNIYIVQGEISTVVGAIKRNSRWNTHTPLDEEQDPLLNSFAHLKETLNYIKELSDVE
PNVFLRPFLEVVRSEDTTGPITGLALTSVNKFLSYGLIDANHEAAAEAIENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKS
AEHTLVDMVQLLFSRLPQFKEEAKSYVGANMKKLKMRAGGMSESSKWKKQKRSPRPPHHM
VRSPSGQMDPTQPSTLSNNNLSGGVPFIECSDSAASSVSSPTTTDSGLDTCSKATSREDL
SDLEPCSSSATMLPDSEPGSPDAQSEGSQVGPAQSASVESIPEVLGDKDNATDQSDSASI
HDMDYVNPRGVRFTQSTQRDGASIIPYGLPCLRELFRFLISLTNPHDRHNTDAMMHMGLQ
LLTVALESAHFTNYQSLLGLVKDELCRHLFQLLSVDRMNLYASSIRVCFLLFESMRVHLK
FQLEMYLKKLMDIITSENMKMPYELKEMALEALVQLWRIPSFVTELYINYDCDFYFSNLF
EDLTKLLSKNAFPVSGQLYTTHLLSLEALLTVIDSTEAHCQAKVLNSSAQQDHTDTLQAE
GENSRNGTDTTTDLNRQGSTNGLSLPQAEDAPVCPPTSGHLMAEKMTLGREDQGDNDPAE
KSASKKPQRFSSCLPDSQELMDIRTKKKLLITGTEQFNQKPKKGIQFLQEKGLLSNPIDN
NQVAQWLRENPRLDKKMIGEFVSDRKHMELLDSFVNTFGFQGLRIDEALRLYLEAFRLPG
EAPVIQRLLETFTDNWHKVNGSPFMTNDAGFALAYAVIMLNTDQHNHNVRKQNIPMTIEQ
FRKNLKGVNGNKDFDQDMLEDIYNAIKNEEIVMPDEQSGLVKDNYVWSVLLHRGATPEGI
FLHLPAGSYDHDLFTMTWGPTIAALSYVFDKSLDENIIQKAITGFRKCAMIAAHYGFSDV
FDNLIISLCKFTTLSSESVENLPTVFGSNNKAQTAAKTVFDLAHRHGNILREGWKNIMDS
MLQLFRAELLPKAMVEVEDFVEPNGKISLQREETPSNRGESAVLSFVNWLTLSGAEQSGL
RGPSTENQEAKQAALLCIKQCDPEKLITESKFLQLESLQELMKALISVTPDEETYDEEDA
AFCLEMLLRIILENRDRVSCVWQTVRDHLCHLCVHPNESCFLVERAVVGLLRLAIRLLRR
EDISSQVLHSLRLLLMMKPHVLSRVSREVAYGLHELLKTNAANIHCTNDWFTLFSLLECI
GAGVKPPASFQLSSTHSDHDAGAQSDSELASHHVSEVDSERGYTSDSGVYTEHSKTRVPR
SATDLDVASSGWLLVGKDDTAVNSKAQLNNPLVNQYSLTLGQDLGQHDTKSLIKCVETLS
FIVRDAAHVTPDNFELCVRAIRVFVEASLNGGYRNHDKKKSHKYDSSKSRMRKKAGGRDK
EGGGGTRRGGSRVSSQRPSRSHSDEEEDEGVPASYHTVSLQVSQDLLDLMHTLHTRAASI
YSSWAEEQRHLEAAGRRIEADSQTLWSSCWCPLLQGIAWLCCDARRQVRMQALTYLQRAL
LVHDLQTLDATEWESCFNKVLFPLLTKLLDNISPADVGGMEETRMRACTLLSKVFLQHLS
PLLSLPTFAALWLTILDFMDKYMHAGSSDLLLEAIPESLKNMLLVMDTAGIFHSADSRTG
YSDLWEITWERIDCFLPLLREELFKQTVIADPGPSPPAESVQPTPSAGQPSSPRVSQPPS
PVPVSPAETRTPSRPASPLEPPAASANGSDRSSPPPASTPPMPVPLTTSPPQASSPRSQP
PFILQPLASPLQVGVPPMSLPIILNPALIEASSPVPLLPPPRPDEVK
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaagaacatctacatcgtccagggtgagattagtaccgttgttggagctatc
aagaggaactccaggtggaatacccacactccactggatgaagagcaggaccctctactt
aacagctttgcccacctgaaagaaaccctcaactacattaaagagctctcagatgtggaa
cccaacgtttttctcaggcccttcctcgaggtggtccgctctgaggacaccactggacca
atcacaggcctcgcccttacttctgtcaacaaattcctctcctacggccttatagatgct
aaccatgaagcagcagcagaggccatagagaacatggccgacgcagtcacacacgctcgc
tttgtgggaaccgaccctgccagcgatgaagtggtccttatgaaaattctgcaggtcctc
aggactctgctgctcacaccggtcggagcccatctgaccaacgagtcggtctgtgagatc
atgcagtcctgcttcaggatctgctttgagatgcgtctgagtgagctcctcaggaaatca
gctgaacacacactggttgacatggtgcagctactgttctctagactaccacagttcaaa
gaggaggccaagagttacgttggtgccaacatgaagaagttgaagatgcgcgccggtggg
atgagtgagtcatccaaatggaagaagcaaaagcgttcaccgaggccgcctcaccacatg
gtccgaagtccctccggtcagatggaccccacccagcccagcaccctcagcaacaacaac
ctctcaggcggcgtcccgttcatcgagtgctcagacagtgctgcttcgtcagtctccagc
cctacaaccacagacagtggcctggacacctgctccaaagccacctccagggaggacctc
tccgacctggagccctgcagctcctctgccaccatgcttcctgactctgagcctggctct
ccagatgcacagtctgagggcagtcaagttggaccagctcagtcggcctcagtggagtcc
atccctgaggttctgggggacaaagacaacgctacggatcagtcagacagcgcctctata
catgacatggactatgtcaacccacgaggagtgcgctttactcagtccactcaaagagac
ggagcgtccatcatcccttatggcttgccatgtctaagggagctctttcgcttcctgatc
tccctgaccaacccccacgaccgccacaacactgacgccatgatgcacatgggcctgcag
ctgctgactgttgcactcgagtcagcacacttcactaactaccagtctttactgggactg
gtcaaagatgagctctgcagacaccttttccagctgctgagtgtggaccgtatgaatctg
tatgcttcctccatacgagtttgcttcttgctttttgaaagcatgagagtacatctgaag
tttcagcttgagatgtacttgaagaagctgatggacatcatcacttcagagaacatgaag
atgccctacgagctgaaggagatggctctggaggctctggtccagctgtggaggattcct
agctttgtcactgagctgtacatcaactatgactgtgacttctacttctccaatctgttc
gaagacctcaccaagctgctgtccaagaatgcgttcccggtgtcggggcagctgtacacc
acccacctgctgtctctggaggctctgctcaccgtgatcgacagcactgaagcccactgc
caggccaaggtgctgaacagcagcgctcagcaggaccacacagacaccctgcaggcagag
ggagagaacagcaggaacgggaccgatactacaaccgatttgaacagacagggcagtacc
aacggtctgagtcttccacaggctgaggacgccccggtgtgtccaccaaccagtggacat
ctgatggcagagaagatgacactgggccgagaggaccaaggggacaatgaccctgctgag
aagagtgcctcgaaaaagcctcaacgcttctcttcatgtttacctgattcccaagagttg
atggacattagaacaaagaaaaagctactgatcacaggcacagagcagttcaaccagaag
cccaagaaagggatccagttcctccaggagaaaggtcttctcagtaaccccatagacaac
aaccaggtggcccagtggctcagagaaaaccctcgactggacaaaaagatgatcggcgag
tttgtcagcgatcgcaagcacatggagctcctggacagctttgtaaacacattcggcttc
caggggctccgtatcgatgaggccctgcggctctacctggaggccttcagactcccagga
gaggctcctgtcatccagagactcctcgaaacctttaccgacaactggcataaagtgaac
ggctctcctttcatgaccaacgatgcgggcttcgccttggcctacgctgtcatcatgctg
aacactgaccagcacaaccacaacgtccgcaagcagaacatccccatgaccatagagcaa
tttaggaaaaatctgaagggagttaatggaaacaaagactttgaccaggacatgttggag
gatatctacaatgctatcaagaatgaggagattgtgatgcctgatgagcagtcggggtta
gtgaaggataactatgtatggagtgtgttgctacaccgaggcgccacacctgagggtatt
ttcctccacctgcctgctggcagctacgaccatgacttgtttaccatgacctggggtcct
accatcgctgccctctcctacgtcttcgacaagagcctggacgagaacatcatccagaag
gccatcactggcttcaggaaatgtgcaatgatagcggctcactatggcttcagtgatgtt
ttcgacaatttgatcatctccctctgcaagttcaccaccctgagcagtgagtctgtggag
aacctccccacagtgttcggcagtaacaacaaggcccagacggcagccaagacggtgttt
gacctcgcccatcggcacggcaacatcctgagggagggctggaagaacatcatggactcc
atgctccagctgttcagagccgagctgctgcccaaagccatggtggaggtggaggatttt
gtggagcccaatgggaaaatctctcttcaaagagaagaaacgccttcaaatcgtggtgag
tcggcggtgctgagttttgtcaactggttgactctgagtggagccgagcagtcaggactg
agagggccgtccacggagaaccaggaggccaagcaggccgccctgctctgcatcaagcaa
tgtgacccagagaagctgatcacagagagtaaatttctacagctggagtctctacaggag
ctaatgaaggctctgatatcagtcaccccagatgaagagacctatgatgaagaggatgct
gccttctgcttggagatgctgctgcgaatcatcctggagaaccgagaccgtgtgtcatgt
gtgtggcagacagtgcgggaccatctctgccatctctgtgttcaccccaacgagagctgc
ttcctggtggagagggccgtggtgggactcctccgcctcgctatccgcctgctgcggcgt
gaagacattagctctcaggtcctacactcgctgcgcctcctgctgatgatgaagcctcac
gtcctgtcccgggtcagcagggaggtggcctatggcctccatgagctactgaagactaac
gcagccaacatccactgcaccaacgactggttcacactcttctccctgctggagtgcatc
ggagctggagtcaaacctcccgcctccttccagctctcctccacccacagcgaccacgac
gcaggggcgcagtcggacagcgagctggcgtctcatcatgtcagcgaagtggactcagag
cgcggctacacctcagactcaggagtctacacggagcacagcaagaccagggtccctcgc
tctgccacagacctggatgtagcaagcagcggctggctcctggttgggaaagatgacact
gcagtgaactctaaagctcagctcaataaccccctggtcaaccagtacagtctgactctg
ggtcaggacctgggccagcatgacaccaagtctctcatcaagtgtgtggagacgctgtcc
ttcatcgtccgtgacgccgcccatgtcacccctgataactttgagctgtgtgtccgcgct
atacgagtgtttgtggaggccagtctcaacggaggttaccgcaaccacgacaagaagaag
agccacaagtacgactcgtccaaatcccggatgaggaagaaggcaggggggagggacaag
gaggggggaggaggcacgaggcgagggggcagccgggtgtccagccagcgtccatcacgt
tcccatagcgacgaggaggaggacgagggagtgccggccagctaccacacggtgtcatta
caggttagtcaggacctgctggatctgatgcacacactgcacacccgggctgccagcatc
tacagctcctgggcggaggagcagcgccacctggaggcggccggccggaggatcgaggcg
gactctcagactctgtggagcagctgctggtgcccactgctgcaaggcattgcgtggctg
tgctgtgatgccaggcgtcaggtgcgtatgcaggccctcacctacctgcagagggcgctg
ctggtgcatgacctgcagactctggacgccacagagtgggagtcctgcttcaataaggtg
cttttccccctgctgactaagctgctcgacaacatcagcccagcagatgttggggggatg
gaggagaccaggatgagagcatgcaccctcctgtcaaaggtgttcctgcagcacctctct
cctctgctctctctgcccacctttgccgccctctggctcaccatcctggacttcatggac
aaatacatgcacgcaggatccagtgacttactattggaggctatccctgagtctctgaag
aacatgctgctggtgatggacacagcggggatcttccacagcgctgactcccggaccgga
tactctgacctgtgggagatcacctgggagcgcatcgactgcttcctgcctctcctgagg
gaggagcttttcaaacagaccgtcatagcagatccaggacccagtcctccagcagagtct
gtgcagcccacaccctcagcaggtcagccttcctccccccgggtttctcagccgccctcc
ccagtgcccgtgtcccctgcagagaccaggacccccagcaggccagcgtctccccttgaa
cccccagcagccagtgccaacgggtcggaccgctcctctccccccccagcctccaccccc
cccatgccggtgccgttaacaacctcccccccccaggcttcctccccccggagccagccc
cccttcatcctgcagcccctcgcctcccctctgcaggtgggagtcccgcccatgtccctg
ccaatcatcctgaaccccgccctcatcgaggcatcgtcccccgtccccctgctcccaccg
cccagacctgatgaagtcaagtaa
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