Trematomus bernacchii (emerald rockcod): 117492042 Help Entry 117492042         CDS       T09643                                  Symbol col13a1 Name (RefSeq) collagen alpha-1(XIII) chain   KO K16617   collagen type XIII alpha Organism tben  Trematomus bernacchii (emerald rockcod) Brite KEGG Orthology (KO) [BR:tben00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:tben00536]     117492042 (col13a1) Glycosaminoglycan binding proteins [BR:tben00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    117492042 (col13a1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  117492042 NCBI-ProteinID:  XP_033998071 LinkDB All DBs Position Unknown AA seq 689 aa AA seqDB search MCEDQKWGVAGKQGEERTRSAQSKQPRWRNWKDLSGVSICIAVSLLCLGVCIVVFVRSSE LQSRILSLEQRDAQLSAWVGSLEQVEPVIMGRLDRILEEKLAARLPKTREVREAPYSCLC PPGPPGPPGRAGFPGAPGEPGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGQNGPKGD MGQRGVKGLQGEPGLKGQKGVCGDYTHRMLPISVRNMPSISPLILKRLKGGPGAQGPPGP PGPPGTPGTPGLNGASGPAGKPGEPGKPGKDPRVSFASLLPGLKGEPGVPGQKGDRGDAG PAGSDGSKGTKGDLGTKGGSGLPGAPGFKGQAGVPGSPGIPGKRGYRGDKGEPSIAATGI KGEPGSPGLPGQLGPKGDTGNKGDKGEAGPEGSVGPRGLPGPTGEPGKAEIHNNENDIRN IPLMGPPGLPGPSGPSGNKGEVGLPGAPGVDGDKGPRGKPGDTGPAGPAGHEGPRGESGV MGFPGPKADKGDMGLSGSPGLDGPTGEKGARGALGPIGLPGSMGPKGEPGEGARSEMMYC PPGPAGPPGPVGPAGTQGFSGPKGELGIGIRGEKGATGLKGDKGDRGHLGLPGLIGPAGV SGPAGPKGERAEKGDAGLPGPIGPQGIPGLVGPQGLKGNRGFRGFKGEKGEPGSPGLDGL DAPCPVGDDGLPVPGCWNKGQHPFQLAKK NT seq 2070 nt NT seq  +upstreamnt  +downstreamnt atgtgtgaggatcagaagtggggggtcgcgggtaaacagggtgaggagaggacccgcagc gcgcagtccaagcagccccgctggaggaactggaaggatttgtcaggcgtttcaatttgc attgcagtgtctctgctgtgccttggagtttgcattgtggtttttgtgaggagctcggag ctgcagtccaggatattaagtctggagcagcgggacgcgcagctctccgcctgggttggg tctctggagcaggtggagcccgttatcatgggccggctggaccgcatcctggaggagaag cttgcagcgcgactaccgaagacccgggaggtgagagaggccccctacagctgcctgtgc cccccaggacctccaggtcctcctggacgggcaggctttccgggagcaccgggggagcca ggtctttccatcattggaccgagaggacctcctggacaacctggaacaagaggatttcca ggatttccaggtccaattgggttggatggcaagcctggacagaacggaccgaagggagac atgggtcagcgtggcgttaaaggactccaaggggaaccaggactcaaggggcaaaagggt gtatgtggagactacacacaccggatgttgcccatcagcgtgcgcaacatgccctcaata agccctctaatcctaaaacgcctcaagggcgggcctggagcgcagggacccccaggacct ccaggaccccccggaactccagggacaccgggccttaatggagcctctggcccagcaggt aagcctggtgagccaggcaaacctggaaaagacccgagggtcagcttcgcttcactttta ccaggactgaagggtgaaccaggtgtgccaggacaaaagggggatcgaggggacgctggc ccagcgggttctgacggctcaaagggaacaaagggagacctcgggacaaagggaggatca ggactcccgggcgctcctgggttcaagggccaggctggcgtccctgggtcccctggcatc cccgggaagaggggctacaggggggacaagggagagccaagcattgctgccacgggaatt aaaggagaaccgggttccccaggactaccaggccagctgggacccaagggtgacacaggc aacaagggagacaagggggaagcaggacctgaaggctcagttggaccaagaggtcttcca ggtccaactggggagccaggaaaggctgaaatccacaacaatgaaaatgatattcgcaac atacctctgatgggcccccctggattacctggaccttcaggcccctctggaaacaagggg gaagttggtctgccgggtgctccaggtgtggacggagataagggacccagagggaagcct ggagatactggtcctgcaggcccagccggtcatgaagggcccagaggggagagcggtgtc atgggcttcccgggacccaaagcagacaagggagacatgggtctatctggatcacctggt ttagatggccctacgggtgaaaagggggccagaggggcccttggccccattggattacct ggctcaatgggtcctaaaggagagcctggagaaggagccaggtcagagatgatgtattgt cctccagggcccgccggacccccaggaccagtggggccagccggaactcaaggattctca gggcctaagggggagctaggcataggcatcagaggagaaaagggagcgacgggtctcaag ggcgacaagggggacagaggccatctcggacttcctggtctaataggaccagcaggtgtt tcaggacccgcaggaccaaagggagagagagctgaaaagggagatgcaggattgccagga ccaatcgggcctcaaggcatccctggtttagtaggaccacaaggactcaaagggaaccgg ggtttccgtggctttaaaggggagaaaggtgaaccgggctcccctggcctggacgggctg gatgccccgtgccctgtgggagacgatggcttacctgtaccaggatgttggaataaaggt caacatcctttccaactggctaagaagtag

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