Trematomus bernacchii (emerald rockcod): 117492066
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Entry
117492066 CDS
T09643
Symbol
xylt2
Name
(RefSeq) xylosyltransferase 2
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
tben00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
tben01100
Metabolic pathways
Module
tben_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
117492066 (xylt2)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
117492066 (xylt2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tben01003
]
117492066 (xylt2)
Enzymes [BR:
tben01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
117492066 (xylt2)
Glycosyltransferases [BR:
tben01003
]
O-Glycan biosynthesis
Glycosaminoglycan
117492066 (xylt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
117492066
NCBI-ProteinID:
XP_033998101
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MVASARVQKLLRRYKLAIAAALTILLVQGLVVWSLRSLEEGEAEKKTRRSKLPDHNSQDP
KRDPALWEKQNSLSGRDRGRWSGRSERTGGTAASALRRGTNRRGEKPSVRVKAHQNRGVT
GAGLERAVIHEPSSSRNFSETRGGADGMAKAPAAAMLGEPGSVDGVHQPSSDFVPKCHIT
GKDALSALHRAGSQQCRQEIANIVCQHQAGKLMPGALPQFCPQLGISNQVQSVGELDNSL
LKVENPVRVAFVLMVHGRAVRQLKRLIKAIYHQDHFYYIHVDKRSGYLHREVLQIAQQYP
NIRATPWRMVTIWGGASLLKAYLRSMQDLLNMLDWKWDFFINLSATDFPTRTNDELVSFL
SQQRDKNFLKSHGRENARFIKKQGLDRLFHECDNHMWRLGERSIPEGLEVSGGSDWFALT
RRFVDYVINSQDTLVSGLKQFYTYALLPAESFFHTVLGNSHMCDTLVDNNLRVTNWNRKL
GCKCQYKHIVDWCGCSPNDFKPQDLIRIQQLTRPTFFARKFESSVNQEAIDILDTHLYGQ
YAPGTTALKAYWESLFEKEDGLAALSDTALTAQMAFFRLGLRNLLTPQSTVDACRFEPVG
YPLSVHVYFYDDRFQGYLIRQEVQATGSKVRETLEMWAVPQATLVLQSNLKEFERLKNLE
IGTEWDPKERIFRNFGGLIGPLSEPLAVQKWARGPNLTATIVWIDPARVVAASYDITVDV
DAEYTQYKPPLQRPLRPGTWSVRVLKQWELVAEVSFLVMPLTFKDKEPLRKEEDSWLHAG
PPGDLYLEQSYQQLSSVLKLLPREAVAQEAQRKAQLVGRPLQAWVDSSIKDFWVTGGLCA
PQTSSCPAVGLCSKTSWSSMSPDPKSELCPVKSDGRIR
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggtggccagcgctcgagttcagaagctgctccgacgatacaaactagcgatagccgcc
gcgttaactatcctcctggtccaggggcttgtggtatggagtctgagaagtctggaagag
ggcgaggcagagaaaaaaacacggcggtctaagctgcctgaccacaacagccaggacccc
aagagagacccggctctttgggagaagcagaactctttgtcggggagggaccgaggccga
tggagcggccggtcggagaggacggggggcacggccgccagcgcactgaggaggggaacc
aaccgcagaggagagaagcccagtgtcagggtgaaggctcatcagaaccggggggtaaca
ggagccgggttagaacgcgcagtcatccatgagccgtccagcagccgtaacttcagcgag
accagaggaggcgcagacgggatggcgaaggctccggccgccgccatgctcggggagccg
ggcagcgtggacggggtgcaccagcccagcagcgactttgtgcccaaatgtcacatcacg
ggcaaggacgcgctgtccgccctgcatcgcgccgggtcgcagcagtgccggcaggagatc
gccaacatcgtgtgtcagcatcaggccgggaagctcatgccaggcgcactccctcagttc
tgccctcagctcggtatatctaatcaggtgcagtccgttggcgagctggacaacagcctg
ctcaaagtggagaacccggtcagagtggcgttcgttctgatggtccacggccgcgctgta
cggcagctcaagcgcctcatcaaagccatatatcaccaagaccacttctactacatccat
gtggacaagcgctcgggctacctgcatcgggaggtgctgcagatcgcccagcagtacccc
aacatccgcgccacgccctggaggatggtcaccatctgggggggggccagcctcctgaag
gcctacctgcgcagcatgcaggacctgctcaacatgctggactggaagtgggacttcttc
atcaatctgagcgctacagatttccccaccaggacgaatgatgagctggtgtcgttcctc
tcgcagcaaagagacaagaacttcctcaagtcccacgggagagaaaacgcccggtttatt
aagaagcagggcctggaccgcctcttccacgagtgtgacaaccacatgtggcgtctgggc
gagcgcagcatcccagaaggcctggaggtctccggcggatctgattggttcgcgctcacc
cgccgcttcgtggattacgtcatcaactcccaggataccttggtgtcagggctgaagcag
ttctatacctacgctctgcttcccgctgagtccttcttccacacggtgctggggaacagc
cacatgtgcgacaccctggtggacaacaacctgcgcgtcaccaactggaaccgcaagctg
ggctgcaaatgtcagtacaaacacatcgtggactggtgcggctgctcgcccaacgacttc
aagcctcaagacctcatcaggatccagcaactgacccgtccgacgttcttcgcccgcaag
tttgagtcctcggtgaaccaggaggccatcgacatcctggacacgcacctgtacggccag
tacgctccgggcaccacggcgctgaaggcatactgggagagtctgtttgagaaggaggac
ggcctggccgcgctcagcgacacagcgctcaccgctcaaatggctttctttcgtctcggc
ctgaggaacctgctgacccctcagagcaccgtggacgcctgcaggtttgaaccagtcggc
taccctctgtcagtacacgtgtacttctatgacgaccgtttccaaggatacctgattcgt
caggaggtccaggccacggggtcaaaggtcagagagacgctggagatgtgggcggtgcct
caagcaacgctcgtcctgcagtcaaacctgaaggagtttgaaaggctcaagaatctggag
atcggcacagagtgggatcctaaagagagaatcttccgtaactttggcggcctcatcggg
cctctgagcgagccgctggcggtgcagaagtgggcgcggggtcccaacctcacggccacc
atcgtgtggatcgacccggctcgggtggtggcggcgtcctatgacatcacggtggatgtg
gatgcagaatacacgcagtacaagcccccgctgcagcgccccctgcggcccggtacctgg
tctgtgcgcgtgttgaagcagtgggagctcgtggccgaggtcagcttcctcgtcatgccg
ctgaccttcaaagacaaggagccgctacgcaaagaagaggacagctggctccacgcaggg
cccccaggcgacctgtacctggagcagagctaccagcagctgagctccgtgctgaagctg
ctcccccgagaggcggtggcccaggaggcgcagcggaaagcccagctggtggggcggccc
ctccaagcctgggtggacagcagcatcaaagacttctgggtcacgggcggtctctgcgcc
ccacagacttcctcctgccccgcggtgggactctgctccaaaacctcctggagctccatg
tctccggaccccaagtctgaactgtgcccggtgaaaagtgacgggaggatcaggtag
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