Trematomus bernacchii (emerald rockcod): 117492238
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Entry
117492238 CDS
T09643
Name
(RefSeq) alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B
KO
K09661
mannosyl alpha-1,6-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B [EC:2.4.1.-]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00510
N-Glycan biosynthesis
tben00515
Mannose type O-glycan biosynthesis
tben01100
Metabolic pathways
Module
tben_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
117492238
00515 Mannose type O-glycan biosynthesis
117492238
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tben01003
]
117492238
Glycosyltransferases [BR:
tben01003
]
Glycan extension
Wide specificity
117492238
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_18
SKA2
Acyl-CoA_dh_1
Motif
Other DBs
NCBI-GeneID:
117492238
NCBI-ProteinID:
XP_033998271
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MIAASSDLCIMVRRCLLTFKPFRIFVVGIGFFSLCFLMTSLGGQLSAKRPGDSPFTVRSE
VLGGQESRGVLRKISDMLEVIMKRMDALSKVGNSTDAHRLDELSSALDRIQPVGLVERIQ
AIAQNMSDMAGRVEQILQRSMAGNKVRDGTLAQCGTPKDPRYPDCLSKMDWMRARWTSDP
CYAFYGVDGSDCSFLVYLSEVEWFCPPLIWRNQTATPTLKPLPKKQAVFQSDIGALLEQV
GTGKESLSFMKRRMRRMAAQWASAARRLDDRLRSHWREQNRILVHVGFLTEESGDVFSPK
VLKGGPLGEMVQWADILTALHVLGHNLKISFSLKELHGFLGVPPGRGSCPLTGPLPFDLI
YTDYHGLQQMKQHMGLSLRKHKCHIRVIDTFGTEPAYNHEEYAILHGYRTNWGYWNLHGR
QYMTMFPHTPDNSFMGFVAEELNETEKQNIQRNKVNNMAVVYGKEASMWKLQGKEKFLTI
LHRYMEIHGTVYYETQRPPEVPAFVKNHGLLPQQELQQLLRKAKLFIGLGFPYEGPAPLE
AIANGCIFLQPKFNPPHSSLNHDFFRGKPTSRKVSSQHPYAEQYIGRPHVITIDFNNSEE
FEATIREIMRINVEPFLPYEYTCEGMLERVHAYIQNQDFCSPEAPFPPVNSSWLSSPFVL
LPNSSILTWASNASSYTSWPPLSALRLLASLEGESCVEACQGAELICEPALYRFINIKEA
FSALELQCDGVESQVNHLLPAFSAEHAECGLQQDPLLFSCAGSSAKYQRLCPCRDYRVGQ
VALCRDCL
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagccagcagcgacctgtgcattatggtgaggagatgtcttctcactttcaaa
ccattcaggatctttgtggtggggattggcttcttcagcctgtgctttctaatgacctct
ctcgggggccagctctcggccaagagacccggagactctcccttcacggtgcggagcgaa
gtgctcggtgggcaggagtctcgcggtgtgctgaggaagatcagtgacatgctggaggtc
attatgaagaggatggatgctctgtctaaagtgggcaactccacagacgcccaccggctg
gatgagctcagctcggccctggacaggattcagcctgtagggcttgtggagcggatccag
gctatagcccagaacatgtccgacatggcagggagagtggagcagatcctacagcgcagc
atggccggaaacaaagtcagggatggaacattagcacaatgtgggactcctaaagacccc
cgttatccagactgtctcagcaagatggattggatgcgcgcccgttggacgtcggaccct
tgctatgccttttatggtgtagacggctccgattgctccttcctcgtctacctgagcgag
gtggagtggttctgccctccactaatctggaggaaccagactgctacacccaccttgaag
cctctgcccaaaaaacaggctgttttccagtctgacatcggggctctgctggagcaggtg
ggcacggggaaggagtccctgagcttcatgaagaggcgcatgcgcaggatggcggcgcag
tgggcctccgctgctcgacggctggatgacaggctgcgcagccactggagggagcagaac
aggattctcgttcatgtgggtttcctgacagaggagtctggggatgtcttcagccccaaa
gtgctgaaggggggtcctctgggtgagatggtgcaatgggccgacatcctcacagccctc
catgtgcttgggcacaacctcaagatctcgttttccctcaaggagcttcacgggtttttg
ggcgtccctcctggaagaggaagctgccctctcacaggacctctgccctttgacctcatc
tacaccgactaccacggcttgcagcagatgaagcagcacatgggtctgtcgctgaggaag
cacaagtgccacatccgtgtgattgacaccttcggcacggagcctgcttataaccacgag
gagtacgccatcctgcacggctaccggacaaactggggctactggaacctccacggccgg
cagtacatgaccatgttcccccacactcctgataactctttcatgggttttgtggcggag
gagctgaatgagacggagaagcagaacattcagcggaacaaggttaacaatatggctgtt
gtgtacggcaaggaagccagcatgtggaagcttcaaggaaaggaaaagttcctgaccatt
ctgcaccgctacatggagatccatgggacggtgtactatgagacgcagcgtcccccagag
gtgcccgccttcgtcaagaaccacggcctgctgccccagcaggagctgcagcagctgctc
aggaaggccaagctgttcattgggttaggattcccctacgaaggtcccgcccctttggag
gccatagccaatggctgcatcttcctacaacccaagtttaacccccctcacagctctctc
aatcacgacttcttcagagggaagcccacctccaggaaggtgtcctctcagcatccgtat
gcagagcagtatattggcaggccgcatgtcatcactatcgacttcaataactctgaggag
tttgaggccaccatccgtgagatcatgaggatcaatgtggagccattcctgccgtatgag
tacacctgtgaggggatgctggaaagagttcatgcctacattcagaaccaggacttttgt
tcccccgaagctccctttcctcctgtaaactcgtcttggctgagcagtcctttcgtcctg
ctgcctaactccagcatcctaacctgggcctccaacgccagctcctacacatcctggccg
ccccttagtgcgctgcgcctgctggcttctctggaaggagagtcctgtgtggaggcgtgc
cagggcgcagagctcatctgtgaacctgccttgtatcgcttcatcaacattaaggaggcc
ttcagcgcgctggagctccagtgtgacggagtggagtcccaggtgaaccacctcctccct
gccttctcagcggagcatgctgaatgtggcctgcagcaggatccgctgctgtttagctgc
gccggctccagtgccaaataccagcgcctctgcccctgcagggactatcgggtcggccag
gtggctctgtgcagagactgcctatga
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