Trematomus bernacchii (emerald rockcod): 117492240
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Entry
117492240 CDS
T09643
Symbol
grin2aa
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04020
Calcium signaling pathway
tben04080
Neuroactive ligand-receptor interaction
tben04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117492240 (grin2aa)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117492240 (grin2aa)
04082 Neuroactive ligand signaling
117492240 (grin2aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117492240 (grin2aa)
Ion channels [BR:
tben04040
]
Ligand-gated channels
Glutamate (ionotropic)
117492240 (grin2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
117492240
NCBI-ProteinID:
XP_033998274
LinkDB
All DBs
Position
Unknown
AA seq
1547 aa
AA seq
DB search
MKWFDRMSLSSKWSKRRSRRSSGPSSSDGSNIALLSFALLVVVTLIADPVAAQKQRGSAA
SEKVPVLNIAVILGRTRYISDRDIRALWSKEDPIDVNVVTLLVNETDPKSIINHMCDLMS
GTKIHGVVFGDGTDQEAIAQILDFISSQTLIPILGIHGGSSMIMADKDDKSTFFQFGASI
QQEALLMLNIMEEYDWHIFSIVTSKFPGYQEFINILKTTVDNSFVGWDLQNVIILDAVEE
DSRSQIMLKKVQSPVVLLYCSKDEAVYVLEEARSLGLTGFGYIWIVPSLTTGNPDLTPEA
FPPGIISVSYDDWDYPLEARVRDGLGIITSAAAAMLEEYGDIPEAKTSCYGPMEKTSKLP
PSALHKFMMNVTWDGRDLSFTEDGYQEFPKLVVIVLNKDREWEKMGKLENRSLTLKYPVW
PRFNSIGDAEMDDNHLSIVTLEEKPFVIVEDVERLTGTCMRNSVPCRKHIKDNSTEAGGT
YVKKCCKGFCIDILKKIATYVKFTYDLYLVTNGKHGKKINNVWNGMVGEVVYKKAVMAVG
SLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLLVTA
MAVFMFEYISPLGFNRNLAQGRDPHGPSFTMGKAVWLLWGLVFNNSVPVQNPKGTTSKFI
VSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDNKFQNPYAYSPPFRFGTVPNGST
ERNIRKNYPAMHQYMTKYHQTGVVDALVTLKTGKLDAFIYDAAVLNYAAGRDEGCKLVTI
GSGYIFATTGYGIALQKGSYWKRQVDLAILAIIGDGEMEELEAQWLTGICHNEKNEVMSS
QLDVDNMAGVFYMLATAMGLSIITFVSEHLFYWRLRYCFTGVCTSTPGLLFAISRGIWSC
IHGVHIDMKKKSDLDFSPQDKMLKLIKSAKQMTNMSNLAGSHMNSPKREFMHSAGPMIMD
MMAEKGNFIYADNRSYAPKDMIYGDTGDLQSYLANRHKDHLNNYIFQGGQHPLTLNDANP
NSVEVAVNADSVQTNAKPPRTLWKKSVDTLRSAPPGPPPMPDMLMPDPRMSMKTQRYLPE
EAAHSDISDCSSRAASYKDPENNKHLKPKDNLKKRSVPSKYPRDCSEVELSYLKTKPVTA
GPNQPGRVVGGEKVYTIDSEREMSLHTDPMHYRESRGLAADDLDYPEIYSDHSDNYRKCE
QPIIHLNSSPLHHGDSDLLPDPTYSKHYNLKEKNMSPHESIERYKQTHCRSCLSKVSSSY
PPTGSYTPAIPAATSATRSPYNRCEACLHTANLYDISEDQLLADPLVSPTMHHQQQQEPD
EMFGLYWPQTDGPHVQKRNRLRLSRQHSFDNIMLEKPKDVDLGRPARSVSLKEKDRFLES
ASDSHYANLFGMRPYSGRLFGTGSKSMMFNHNLEEGKRSQSLYPAHGSDNPFLSHSLRDD
TSSRLVHGRSSSDIYKQLAVASPAAVLGAPPIKTRNDANNLRSSVKSTTSYCSRDGRIAN
DMYNKEHVMPYSASKTSAYPAPRGVLNSAQFSNRRVYKKIPSLESDV
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggtttgacagaatgtccctcagcagcaaatggagtaagaggaggagtagaagg
agcagcggtcccagcagtagcgatggtagtaatattgcgctgctatcttttgccctcctg
gttgtggtgaccctgattgcggaccctgtggcggctcaaaagcagcgaggtagcgccgcc
tcggaaaaagtgccggtcctgaacattgcggttatcctgggacgcacacgctacatctca
gaccgggacatccgggcgctgtggagcaaggaggaccccatcgacgtcaatgtggtcaca
ctactggtcaatgagaccgacccgaaaagcatcatcaaccatatgtgcgacctgatgtcc
gggacaaagatccacggcgtggtgtttggggatggcaccgaccaggaggccatcgcccag
attttggattttatttcctcgcagacacttattcccatcctgggcatccacggagggtcg
tccatgatcatggctgataaggatgataagtcgaccttcttccagttcggtgcctccatc
cagcaggaggctctgctgatgctgaacatcatggaggagtacgactggcacatcttctcc
attgtgacctcaaagttccccggctaccaggagttcatcaacatccttaaaacgactgtg
gacaacagcttcgtgggctgggacctgcagaatgtcatcatcctggacgcggtggaggag
gacagccgctctcagatcatgctgaagaaggtccagtcccccgtggtgctgctctactgc
tccaaggacgaggcggtgtacgtcctggaggaggcgcgctccctgggcctcaccggattc
ggatacatctggattgttccgtcgctcaccaccggcaacccggatctaacgcccgaagcg
tttcccccggggataatctctgtgtcctacgacgactgggactacccgttggaggcgaga
gttcgggacggtctgggcatcatcacgtcggcagcggcggccatgttggaggagtatggc
gacatcccagaagcgaagacgtcctgctacgggccgatggagaagacttctaaactgcca
cccagtgcgctacataagttcatgatgaatgtgacatgggatggcagggacttgtcattc
acagaagatggctaccaggaattcccaaagctggtggtcattgttctcaacaaggacaga
gagtgggagaagatggggaaactggagaaccgcagcctgacactgaagtacccggtgtgg
ccgcgcttcaactccatcggtgacgccgagatggacgacaaccacctgtccatcgtcacg
ttggaggagaagcctttcgttattgtggaggacgtagaaaggctcactggtacctgcatg
aggaactctgtgccctgcaggaaacacataaaagacaactcaactgaggctggggggaca
tatgttaagaagtgctgcaaaggcttctgcatcgacattctgaaaaagattgccacgtat
gtaaagttcacctatgacctttacctggtaaccaatggcaagcatggcaagaaaatcaac
aacgtctggaatgggatggtgggagaggtggtctataagaaagccgtcatggccgtcgga
tctctgacgatcaatgaggagcgttctgaggtcatcgatttctccgtcccgttcgtggaa
acggggatcagcgtcatggtctcccgtagcaacggaacggtctccccgtcagcctttctc
gagccattcagtgcatcagtgtgggtcatgatgtttgtgatgctactactggtgactgca
atggctgtctttatgtttgagtacatcagtcctcttggattcaaccgaaacctggcgcag
ggcagagacccccatggcccttccttcactatgggcaaggcagtgtggctgctgtggggt
ctggtcttcaacaactctgtgcctgttcagaacccgaaaggaactaccagtaagttcata
gtgtcagtgtgggccttcttcgctgtcatcttcctggcctcctacactgccaacctggcc
gccttcatgatccaggaggagtttgtggatcaagtcaccgggctctccgacaacaagttt
cagaacccgtatgcatactcgcctccgttccgcttcgggacggttccaaacggatcaaca
gagagaaacatcaggaaaaactaccccgctatgcaccagtacatgacaaaatatcatcaa
actggagtcgtggacgcacttgtcaccctcaaaacggggaaactggacgccttcatctac
gatgctgcggtgttgaactacgcggccggcagagatgagggatgtaagctggtgaccatt
ggcagcgggtacatctttgctaccactggttacggcattgctctacagaaaggttcctac
tggaaacgacaggtggatctggctatcctggccatcatcggagacggtgaaatggaggag
ctggaagcccagtggctgacaggaatttgccacaatgagaagaacgaggtgatgtccagt
cagctagatgtggacaacatggccggggtcttctacatgctggccaccgccatgggactc
tccatcatcaccttcgtctctgagcacctcttctactggaggctgagatactgcttcact
ggagtctgcaccagcacgcccggccttcttttcgccatcagtaggggaatctggagttgc
atccatggcgtccacattgacatgaagaaaaagtcagatttggactttagcccccaggac
aaaatgctaaagctaataaaatcagccaaacagatgaccaacatgtctaacctggccggc
tcccacatgaactcacccaaacgtgagttcatgcactcagccggcccgatgatcatggac
atgatggcggagaagggcaacttcatctacgccgacaaccgtagctatgctcccaaagat
atgatctacggggacaccggtgacctgcagtcttaccttgctaaccggcacaaagaccac
cttaacaactacatcttccagggaggccagcatcctttgaccctgaatgatgctaacccc
aactcagtagaggtggcggtcaacgctgactcagtccagaccaacgccaagcctccccga
acactgtggaagaaatcggtggacacgcttcgttcggcgccacctggaccccctccgatg
cccgacatgctgatgccagacccacgaatgtcaatgaagacacagcgctacctccctgag
gaggcagcccactctgacatctccgactgttccagcagggcggcctcgtacaaggaccca
gaaaacaacaagcacctgaagcccaaggacaacttaaaaaaaagatcggtgccatcgaaa
tacccaagggactgcagtgaggtagagctgtcctacttaaaaactaagccagtcaccgct
ggacccaaccaacccggcagagtagtaggaggagagaaagtttataccatcgactcagag
cgagagatgagcctgcatacagaccccatgcactaccgtgagagccgcggcctcgctgcc
gacgatttggattaccccgagatttactccgaccacagcgacaactataggaagtgtgag
cagcccatcattcatctaaactcctcccctttgcatcacggcgactcagatcttctccca
gatccaacttactctaaacactacaacctgaaagagaaaaacatgtccccacatgaatcc
attgagcgctacaaacagacacactgccggtcttgcttgtccaaagtgtcctctagctac
cccccaacagggtcatacacccctgctattcctgctgcaacttctgccacacgctcacca
tacaatcggtgtgaagcatgcctccacacagcaaacctgtatgacattagcgaggaccag
ctccttgccgaccccttggtcagtcccaccatgcaccaccaacagcagcaggagccggac
gaaatgtttggtctgtattggccgcagacggatgggccacatgttcaaaagagaaaccgc
ttgaggctgagtcgtcagcactccttcgacaacatcatgctagaaaagcccaaggatgtg
gacctgggtcgaccggcgcgcagcgtcagcctgaaggagaaggatcgcttcctggagtct
gcatctgactcgcactatgccaacctcttcggcatgcgtccctactccggcagattgttt
ggcaccgggtccaaatcgatgatgtttaaccacaacctcgaggagggcaagaggagccag
tccctgtacccggcccatggctcggacaaccctttcctcagccactcgctgagggacgac
accagcagcagactggtccatgggcgtagctcctcagatatttacaaacagctggcagtg
gcctcacctgcagcggtcctcggagcgccccccatcaaaacacgcaacgatgcgaacaat
ctccgctcttctgttaaatctaccacttcatactgctcacgggacgggcggatagccaat
gacatgtacaataaagagcatgtgatgccttactcagcctctaagactagtgcatacccg
gccccacgtggtgtcctaaactcagcccagttcagcaataggcgggtgtataaaaaaatc
cccagtctggagtcagatgtttag
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integrated database retrieval system
