Trematomus bernacchii (emerald rockcod): 117492254
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Entry
117492254 CDS
T09643
Symbol
gga3b
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA3 isoform X1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117492254 (gga3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117492254 (gga3b)
Membrane trafficking [BR:
tben04131
]
Endosome - Golgi transport
Others
GGA
117492254 (gga3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
DUF6675
DASH_Dad4
Motif
Other DBs
NCBI-GeneID:
117492254
NCBI-ProteinID:
XP_033998295
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MAYQEGESLESWLNKATHPSNRQEDWEYIIGFCDQINKELEGPQIAVPLLVHKIHSPQEW
EALQALTVLEACMKNCGRRFHNEVGKYRFLNELIKVVSPKYMGDSASEKVKLKIVEMLYS
WTVAFPNETKISEAYQTLRRQGLVTNDPELPLDRTLIPSPPTRPKHPVFDNEDMGKLLAE
LLRSKNPEDLQEANRLIKNMVKEDEARVHKVTKRIHTLDEVNINVKLLTEMLSHYNKENS
TDSDKDIIKELYQRCDKLRRAAFKMATESEDNDTNLGDILQASDDLSRVINSYKKIVEGL
PVNGDSEEPRPTAGHSESAETTETLIDLDGLDTPSPPQPGPPHFQSSDLVSISPIISSIP
ILPPPPKRLAGSQSSSPSHPPLDMASTSLSLLDDELLSLGLNDPPTSLSSQSKPKLNDLS
NHWTTLQASASGLDMFGGAACSGPVVPPSEPAAATNSLQNLQDLAMMGFPDHKSSSLMAA
RGSSFGMSAAAPPLIAGHGSPSSPSFLQCTVPGSPALSHAKVQSLGSAPGSPLFRSLSPC
HPPLHGSPARATDVSLSNVHIPLETIRPSKVLPVTAYDKDGVRMLLNFAANCPPGRTDVL
VMVVSTLNTAPLPVQNVVLQAAVPKSMKVKLQPPSGTDLAPFNPILPPASITQIMLLANP
TKDKVRLRFKLAFTLGDRLCNEVGEVNQFPPQESWGHL
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccaggaaggggagtcgcttgaatcttggctcaataaagccacccatccttca
aacagacaggaggactgggagtacataataggcttctgtgatcagatcaacaaggaactg
gaaggtcctcagatagcggtacctctgcttgttcacaaaatccactcaccgcaagaatgg
gaggctcttcaggctcttacagtattggaggcatgtatgaagaactgcgggagaaggttt
cataatgaagtcggaaaatacagatttttgaatgagctgattaaagttgtgtccccaaag
tacatgggcgacagtgcatcagagaaagtgaagttgaagatagtagagatgctgtacagc
tggaccgtggcgttccctaatgaaactaagatcagtgaagcctaccagacgctgagaaga
cagggcctcgtcactaacgacccggagttacccctcgacaggactctgattccctctcct
ccgacacgacccaaacatcctgtgttcgacaacgaggacatgggcaagctgcttgctgag
cttctgcgaagtaaaaacccagaggacctccaggaagcaaacagactgatcaaaaacatg
gtgaaagaggatgaggctcgagtacacaaggtaacaaagcgcatacacactctggacgag
gtgaacattaacgtgaagctgctgacggagatgctgtcccactacaacaaagagaactcc
actgactcagacaaggacatcataaaggaactctaccagcggtgtgacaagctgaggcgc
gctgctttcaaaatggccaccgagtcagaggacaatgacaccaatttaggtgacatcctg
caggccagcgatgacctctccagggtcataaactcctacaagaagattgttgaggggctg
cccgtcaacggagacagcgaggagccccgacccacagctggtcacagtgagagtgcagag
accacagagactctgatcgacctggacggcctcgacactcccagccctcctcaaccgggc
ccccctcacttccagtcctcagatctggtctccatcagtcccattatctcctccatcccc
atcctgcctcctcctcccaaacgtcttgccggctcccagagcagcagccccagccacccc
cccctcgacatggcctccacgtcactctctctcctcgacgatgagctgctgtctctagga
ctgaacgacccccctacctctctgagcagccaatcgaaacccaagttgaacgatttgtcc
aatcactggactaccttgcaggcttcagcttcaggtctggatatgtttggcggtgcagct
tgttcaggtcccgtggtaccaccgtctgagcccgctgcagccacaaacagtctgcagaac
ctgcaggacctggccatgatggggtttccagatcataagagttcctcgctgatggcagca
agaggaagcagcttcgggatgtctgcagcagcgcctcccctcatagctggacatggctct
ccctcctcaccctcttttctccagtgtacggtgccgggctctcccgctctgtcccatgct
aaggtccagagcctgggctcggccccgggcagccccctgttccgctctctgtccccctgc
caccctcccctccacggcagcccggccagagccacagacgtctccctgagcaacgtgcac
atccctctggagacaatcagaccgagtaaagtgctgccagtgacggcctacgataaggac
ggtgttcgcatgctcctcaactttgcagctaactgcccccccggcaggactgacgtgtta
gtgatggtggtctcaacgctcaatactgcccccctgcctgttcaaaatgtggtactgcag
gctgctgtgcccaagtcaatgaaggtgaagctgcagcctccatcaggaacagacctggct
ccatttaacccgatcctaccaccggcctccattacccagatcatgttgctggccaaccca
acaaaagataaggtgcgtctgcgcttcaaactggcgttcacactcggagaccgtctgtgc
aacgaggtcggagaggtcaaccagttccccccacaggagagttggggtcatctatag
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