Trematomus bernacchii (emerald rockcod): 117492255
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Entry
117492255 CDS
T09643
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117492255 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117492255 (nup85)
03036 Chromosome and associated proteins [BR:
tben03036
]
117492255 (nup85)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117492255 (nup85)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117492255 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
117492255
NCBI-ProteinID:
XP_033998297
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MEELDVEPAITNIPAASDGKHLGFAWGPGDILVYETLYKASPGAKGSGCSFVHEVRKDED
IYSPILRKLFNESHHIFVGLQTIKEDLPSKNKKPQFVSISKNYRSVIRACMEELQQVAVS
TKDAKMAMQYGNQVSILLAIELIWNLAEVLFIDSAPAGSLLLHLLDWVRLHKADVDEKAR
EVLQSESPAEHKDYWDVVLSYVMQGRLEESRQMLVKQATLHPAPRNMYKLMDTLLSKMPF
YNPGGNQTLTEYDVKWRHWHEEVDRCLQDNSFASNKHLEIICKILVGDEDTLLEHKELLG
TWYHFLVTRLLFSHPTVQPTELHYYAQSCMTMFLDSRSVPEPLDNILLAAFEFDIHQVIK
ECSIALNNWWFVAHLTDLLDHCHLLQSHNLHFGSNLREFLLLEYASGLFTHHSLWQLAVD
YFDHCPDLGRVYLELQIERVPLNTERKALKVLRICEQRQMSEQVRSICKIMAMRALKNNR
LGSALSWSIRAKDAAFATLISERFLQDYCARGTFSDLDLIDNLGPAMLLSDRLTFLGKYR
EFHRLYGEKRFGEAAKLLLSLMTAKIAPRSFWMTLLTDALPLLEQKEVIFSAGQTYELMF
CLEELTSSLSSVAPATDGTMQDEDIEQTKVELLRLALARNLAMAIVKEGTVST
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttggacgttgagccggccatcaccaatattcctgcagccagtgatgggaag
cacttgggatttgcctggggtccaggtgatatccttgtgtacgagaccctttacaaagca
tcaccaggtgccaaaggatcaggctgctccttcgtccatgaggtcaggaaagatgaggac
atatattcccccattttacggaaactcttcaatgagtcacatcacatctttgttggcctg
cagacaattaaagaagacctccctagcaagaacaaaaaaccccaatttgtgagcatcagt
aaaaactatagatctgtgatacgagcctgtatggaggagcttcagcaagttgcagtttcc
acaaaagatgcaaaaatggccatgcaatatggaaatcaggtgtccattctgttggccata
gagctgatctggaatctggctgaagtgctgttcattgattctgctccagctggttccctg
ttgctccacctactcgactgggtaaggttacacaaggctgatgtggatgaaaaggccaga
gaagtgctgcagagtgagagccctgctgagcacaaagactactgggatgtggtgctgagt
tacgtgatgcagggcaggttggaagaatccagacagatgttagtgaagcaggccacccta
caccctgcccccaggaacatgtacaagctgatggacactctgctcagcaagatgcccttc
tacaatcctggaggcaaccagacgctgacagagtatgatgtgaagtggaggcactggcat
gaggaggtggaccgctgcctgcaggacaattcattcgccagcaacaaacatctggagatc
atctgcaagatcctagttggggatgaagacacattgctggagcacaaggagctcctgggc
acctggtatcacttcctggtcacgagactactcttcagccaccctacagtccaacccaca
gagttgcactactatgcacagtcctgcatgacgatgtttctggactcgaggagcgtccct
gaacccctggacaacattttactggctgcgtttgagtttgacatccaccaagtcatcaag
gagtgcagcattgctctcaacaactggtggtttgtggcccatttgacagatctgttggat
cattgccatctcctccagtctcacaatctgcattttggatccaacttgcgagagtttctc
ctgctagaatatgcttctggtctcttcactcatcacagtctttggcagttggccgtggat
tactttgaccactgcccagatttaggccgggtgtacctggagctgcagattgagcgtgtt
cctttaaacacggagcgcaaagccctcaaggtgctcaggatctgcgagcagaggcaaatg
tcagagcaagtgcggagcatctgtaagatcatggctatgcgagccctgaagaacaacagg
ctgggctcagctctctcctggagcatcagggccaaagatgctgccttcgccaccctcatc
tcagagaggtttctacaggattattgcgccagagggacattctctgatctggatctgatc
gacaacttgggtccagcaatgctgctcagcgaccggctcactttccttgggaagtaccgt
gagttccaccggctgtacggagagaagcgcttcggcgaggcggccaagctgctcctctcc
ctgatgacggccaagatcgccccccgcagcttctggatgaccctgctgaccgacgccctg
ccgctgctggagcagaaagaggtgatcttctcggccggccagacctacgagctgatgttc
tgtctggaggagctcacctcctctctgagctccgtggctcccgccacagacgggactatg
caggatgaagacatcgagcagaccaaggtggagctcctgagactcgctctggccaggaac
ctggccatggctatagtcaaagagggaactgtgtcaacatga
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