Trematomus bernacchii (emerald rockcod): 117492360
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Entry
117492360 CDS
T09643
Symbol
ap5z1
Name
(RefSeq) AP-5 complex subunit zeta-1 isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tben03400
]
117492360 (ap5z1)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
117492360 (ap5z1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_AP5Z1_C
TPR_AP5Z1
SPG48
Phage_TAC_14
Motif
Other DBs
NCBI-GeneID:
117492360
NCBI-ProteinID:
XP_033998475
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MYSHGSESLIKQAREIQDSELQKFYSRLVKLLQGKELGYETVDSLQRLHLILSANKYIRT
LPPELQKRLQSLLSSPAEQFQVLSSAVLRETLPPAAHSGNYSQENIVQLNSHAAALLLSQ
AGSRADVSSLCSQLLRGLESRQSEGPTNSLTHTLPILNTILTHNLECLTEDHVTLLSKKL
VDWLRYASILQGGGASSGGFFTGPRSRQPVPIAELDGTVSGDFFTVLCVGQSFTEDQWMN
VFSFSALRHWLLTYHSVSNGNGTADTAHRLQLSLSLSHSHSFSNDDRSEVDGSVVSMVSV
TSSSSRLLPPKERLREKSFQYCQRLIEQSDRKAHKKSDADLQKACLVEAVCILDCVCEED
ASLVFRAFPCIKALFGRLSSDLSFARVLLPIAQFYLNHGEMAAVDCGSVWALVFARFPAE
LFNDPFLAHELLRFLRLNLESLQLRVPQYTHSFPNLLKFLAWDSPAVVDDFVDLLPSLVT
AGTAVELLHTLLDLPCLSATLVLQVRSTCLPISEQSGRGLLSLDAFRSPSFRGLFLFLLR
GEAGSGDTIDRLSTLHELLVETADWPRVVQCAQTVPVLLHIFFNTVITVADEKLLAHLIL
VMLERSSLLLNIPKYNKEIHRVFSSHLLRLCKLHPSLVMDQSHELLEFSGATANVYSKEE
LYTHVVWVLGEYLSVSCDSRCSVTLITSCFEALEAVLFEITSSAPPPGTDCPAPRVVTTL
MSALAKLASRSHDLIPRVSLFLSKLRTVTRGGSVAWCSDEEDLVAIVTRGEELWSLLKAP
GVAQSVLTPPAHVTTPQWHRDTNVALPLRLRTLTNLTHSH
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgtactctcacggctcagagagtttaattaaacaagcaagggagatccaggactctgag
ctgcagaagttctacagccggctggtgaagctgctccaggggaaggagctgggttacgag
acggtggactcgctgcagaggctgcacctcatcctctccgccaacaagtacatccggacg
ttgcctccagagcttcagaagaggcttcagtcgctcctctcctcccctgccgagcagttt
caggtgctgagctcagcggtgctcagagagacgctgccacctgctgctcactcggggaac
tacagccaggagaacatcgtccagctgaacagccatgctgccgccctgctgctctcacag
gcaggatctagggcagacgtgtcgtctctctgcagtcagctccttcggggtctggagagc
cgtcaatcagaggggccgaccaactcgctcacacacactctgcccatcctcaacaccatc
ctcacacacaacctcgagtgcctcactgaagatcacgtgaccctcctgagtaaaaagctt
gttgattggctgcgttatgcgagcatccttcagggaggcggggcttcctctggaggattc
ttcacagggccgaggtcacgtcagccggtgccgatagcggagctggatggcacggtgtcg
ggggacttcttcacggtgctgtgtgtggggcagagcttcacggaggaccagtggatgaac
gtcttctccttctccgcgctgcgccactggctgctcacctaccactcggtttctaacggc
aacggcacagcggacactgctcacaggctgcagctcagcctctccctctcccactcccac
tccttctctaatgatgaccgttcggaggtggatggatcggtggtttccatggtttctgtg
acttcctcctccagccgcctgctgcctccgaaggagcgtctgagagagaaatccttccag
tactgccagcgcctcatcgagcagagcgaccgcaaggcgcacaaaaagtcagatgcagac
ctgcagaaagcgtgcctggtggaggcggtgtgtatcctggactgtgtgtgtgaggaagac
gcctcgctggtcttccgggcgtttccgtgcatcaaggcgctcttcggtcggctgagctca
gatctgtcgttcgctcgggtgctgctgcccatcgcccagttctacctcaaccacggcgag
atggctgcagtggattgtgggtcggtgtgggcgctggtgttcgctcgttttcccgccgaa
ctcttcaacgacccgttcctcgctcacgagctcctgcgcttcctccgactgaacctcgag
agtctgcagctccgagtgccgcagtacacgcactccttccctaacctgctgaagttcttg
gcgtgggacagcccggcggtggtggatgattttgtggacctgctgccctctctggtgacg
gctggtactgcagtggagctgctgcacactctgctggacctgccctgtctgtccgccacg
ctggtgctgcaagtcaggtcaacttgtttgcccatctctgagcagagtggccgtggcctc
ctgtcactcgatgcctttcgaagcccgtctttcagagggcttttcctcttcctgctgaga
ggggaagcgggctcaggagacacaatcgaccgactgagcacgctccatgagctgctggtg
gagactgctgattggccgagagttgttcagtgtgcccagactgtccctgtgctgttgcac
atttttttcaacactgttattacggtagcagatgagaagctcttagctcacctgatcctg
gtgatgctggagagaagcagcctcctcctcaacatccccaaatacaacaaagagatacac
agggtgttcagctcccacctgctgaggctgtgtaagctgcacccctctctggtcatggat
cagtcccacgagctgctggagttctctggagccacggccaacgtctacagcaaggaggaa
ctctacactcatgtggtgtgggtgctgggagaatacctctcggtgtcatgtgactcccgc
tgctccgtgacgctcatcacttcctgtttcgaggcgttggaggcggtgctgtttgagatc
acgtcctccgcccccccgcccggcacagactgccccgcccccagagtcgtcaccactctg
atgagcgctctggccaagctggcgtcacgatcacatgacctcatacccagggtgtctctg
ttcctctccaagctgagaacggtcaccagaggcgggtcggtcgcctggtgctccgatgaa
gaagaccttgttgccatagtaacgcgaggcgaggagttgtggtcgctgctaaaagccccc
ggtgtggctcagagcgtcctgaccccccctgcacacgtcaccaccccccagtggcacaga
gacaccaacgtggccttacccctccgactgaggaccctcacaaacctcacacactcacat
taa
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