Trematomus bernacchii (emerald rockcod): 117492375
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Entry
117492375 CDS
T09643
Name
(RefSeq) F-box only protein 30-like
KO
K10307
F-box protein 30
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117492375
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117492375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
117492375
NCBI-ProteinID:
XP_033998506
LinkDB
All DBs
Position
Unknown
AA seq
755 aa
AA seq
DB search
MEEDHVHCMSCFNQRCNFRTQPDISCDIMTCPLVCGAVFHSCKVDEHHLMCPLMRVPCLN
RDYGCPANLVRNQMYAHLDVCPAGVVCCTMEWNRWPVSCLDYTSYESLSRGVEEVEQLDM
ALALQDQRTLLESLKVIAMSPTAEGEPCLPVSKENRETGSSSPTSAPEASTVIDTASHSS
SSHQPQPPPSVLAKERIASGINGLNEEHFGKLYEATVETARSLAAALDFVSNANSVDSST
ECVNSGAATPMSTLSDNGDPKNELEIKIPVAADGLNKKDMEVQSVCSSCLIGNGALKGTD
PKILKPANGPLSGAMEAFPVEVQDDMNAGVSEEPVTPQMASPVHVRQGVAPSAGHVLLED
RGLALLENHGHDRKFHNYNFFRGQGQCSLPNGRKGYFKDRSLYRLRPKMEDKAVDTSDLE
QDEDPMGLGEIDLITAALFFCLEESRECRRISDKVYVDGYRVDFGTQTFTFPAAILVTNT
RVGDIASASACDHAAPQLSYPSPFRTLRLCLVLEALEVEAVPHNRYLPPNPRYQHMFPFV
CGQSLRRDQFSSHFINVHGDIHAGLNGWMEHRCPLAYYGCTFSQRRFYPSTQGAKVVHDR
HLRSFGVQPCPGAQLPVDFQSDQLSGLPIEILWHIAGFLDSFSLCQLSLVSRTMREVCAS
LLQIRGIVELQWERRRCPGNPGTVSWQIKNRVWRFSTAFSPVSSWGFNDLPSMSNHLKKC
HFNTAEHKTEPVPLPAMCTARDGQSLRRVLRHINS
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagatcatgttcactgtatgtcctgcttcaatcagagatgcaacttcagaact
caaccagacatttcttgtgatattatgacctgtcctttagtgtgtggggctgtatttcac
tcctgcaaagttgatgagcaccaccttatgtgcccactgatgagggtcccctgcctaaac
agagactatggctgccccgccaacctggtgcgtaaccaaatgtatgctcacctcgatgtg
tgtccagctggagtggtgtgctgcactatggagtggaacagatggcccgttagctgcctg
gactacacttcctatgaaagcctgagccgtggagtggaggaggtggagcagctagacatg
gcacttgctcttcaggaccagcgtacactactcgagtccctcaaagtgattgccatgtca
cccactgcagaaggagagccgtgtctccctgttagtaaggaaaacagggaaacgggctca
tcttcgcctacatccgcccctgaggcctccaccgttattgatacagcttcacactcatca
tcctcacaccagccacaacctcccccgtcagttttggcaaaggagagaattgccagtgga
attaatggcttgaatgaggagcacttcggtaaactctacgaggccacagtggagacagca
agaagcttagctgctgctttggactttgttagcaatgccaactctgttgacagcagcaca
gagtgtgtgaacagtggagctgctactccgatgagtacattgagcgacaatggagaccct
aagaatgaactagaaatcaaaataccagtagccgctgatggtttaaataaaaaagacatg
gaggtgcaaagtgtctgttctagctgtttgataggaaatggggctctcaaaggaacagat
ccaaagattttaaaacctgcaaatggaccactgtcgggagcaatggaggcctttcctgtt
gaggttcaagatgacatgaacgctggggtttctgaggagcccgtcacccctcagatggca
tctccggtgcatgtcagacagggagtggcaccgagcgctggtcatgtgttgcttgaagac
agggggctagctcttttagaaaaccatgggcatgatcgtaaatttcacaactacaatttt
tttaggggccaaggccaatgttcattacctaatggacggaaaggttacttcaaagacagg
tcactgtatagattgcgaccgaaaatggaggacaaggcagtagatacctcagatttggag
caggatgaagaccccatgggtctgggagaaatcgatctgatcacagcagcgctgttcttt
tgtttagaggagtccagagagtgtagaaggatctctgacaaagtctatgttgatggctac
cgtgttgactttggcacacagactttcactttccctgcagccatcttggttaccaacact
agagtcggggacatagcttctgcatctgcctgtgaccatgcggccccccagctttcctac
cccagccctttccgcactctccgcctctgccttgtcttggaggctctggaggtcgaggca
gttccacataaccgctacctccctcctaaccctcgctaccagcatatgttccctttcgtc
tgtggtcagtcattgcgcagggaccagttttcttcccatttcataaatgtccatggtgac
attcacgctggtctcaatggttggatggagcaccgctgcccgctggcatactatggctgc
acattctctcagcgaaggttttacccatccacccagggggccaaagtggttcatgacagg
cacctcaggtcctttggggttcagccttgcccaggggctcaacttcctgttgatttccag
tcggaccaacttagtgggcttcccattgagatattgtggcatatagctgggttcctggac
agtttcagcctgtgccagctgtctctggtgtcacggactatgagggaggtgtgtgccagc
ctcctccagataagaggcatagtggagctgcagtgggagcgaagacgttgccctggtaac
cctggcactgtatcatggcaaatcaaaaatagagtgtggagattcagcactgccttcagc
ccggtgtcatcatggggtttcaatgatctccccagcatgtcgaaccatctcaagaagtgt
cacttcaacacagcagagcacaagacggagcccgttccccttcctgccatgtgcactgca
cgagatggacagtcgctgcgccgcgtcctgcgtcacattaactcctga
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