Trematomus bernacchii (emerald rockcod): 117492415
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Entry
117492415 CDS
T09643
Symbol
cdk12
Name
(RefSeq) cyclin-dependent kinase 12 isoform X1
KO
K08819
cyclin-dependent kinase 12/13 [EC:
2.7.11.22
2.7.11.23
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tben01001
]
117492415 (cdk12)
Enzymes [BR:
tben01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
117492415 (cdk12)
2.7.11.23 [RNA-polymerase]-subunit kinase
117492415 (cdk12)
Protein kinases [BR:
tben01001
]
Serine/threonine kinases: CMGC group
CDK family
117492415 (cdk12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Kinase-like
Pkinase_fungal
Kdo
Motif
Other DBs
NCBI-GeneID:
117492415
NCBI-ProteinID:
XP_033998570
LinkDB
All DBs
Position
Unknown
AA seq
1355 aa
AA seq
DB search
MPGSDRHHGTKRKPESSSLSGVPQQTQASTRTSAGDKTSKEGKVHGKSSMSSSNTKRKRH
KSTKHNRESSASGAEYVTLGDAAPPGVNTVKPLVEYDDISSDSDTFSDPPSSRPSERGGG
DLLEPSPDYDRQEAGAEAGGRENKGHKHSRKKPKDPNKVRDPGNGERGIKKKNSKDHEKG
VAVKNKEKAASSGTSSKRHVQPEGDSKRAELMLTTQPAASVGSATSSTSSSRSKESSRSG
KTRKEKEKQQRKEGRAAEGSQSSSQRNRADRTHRKASKSLKSSPKGKSSNRGSPRRKGAN
AAHSPSPRRAAGSESPQASGYGQQVDDTYSRRRVAQQSPTPYGDTSRRSRQRSDSPYGSR
HRSSSYERDSSPYSRRRSISPYGTRRSSSNSPMSRRSGRSRSRSPMHYSTSRRSTSRPRS
KRHTSSVAAGASSHSSRPTSRSPPSRLPLNSSLGAELSRRKKERQAAEAAARASGGAATP
PPAVRKSAGTSALRPSKPAPPQPEKDSATPAEPLPAPPAPLSQDAPSAEDQFSAPLPSSS
TSSPAPPPPSPPAPPAPAIQIPPPQPQAEASIQPPTPSTISQAKSPAPAPPCSPVRQMPL
HKTSTLPLLPLPPALLGNTQGSPKKSTPPQRPSRKEKEVRSRTSLIDLPLPPCLPGGDSS
PPQCPIRQATPLPPAVLKKRPKICCARYGERKHTQSDWGKRCVDKFNIIGIIGEGTYGQV
YKAKDKETGELVALKKVRLDNEKEGFPITAIREIKILRQLKHRSVVNMKEIVTDKQDALD
FKKDKGAFYLVFEYMDHDLMGLLESGLVQFSHEHVRSFMRQLMEGLDYCHKNNFLHRDIK
CSNILLNNRGQIKLADFGLARLYSSEESRPYTNKVITLWYRPPELLLGEERYSPAIDVWS
CGCILGELFTKKPIFQANQELLQLEHISRLCGSPCPAVWPDVIKLPLFNTMKPKKQYRRR
LREEFAFLPSAALDLLDRMLTLDPGRRCSAEQALVSDFLSNVEPNKMPPPDLPHHQDCHE
LWSKKRRRARQSGVPEDVPKVPRKETTGTSSGENSRPQSSPAVPPPPPPGKPPPPVTLES
ELSGLGVAADQLNPTELAVLMNLLQGQTDLSLPQVAQLLNLSTPETLSQSLSALSEASDQ
QGAPEDQAPTAARSQPPEPPPEPREPSPTSGDPALSQEDQANLLALLLGHIIKPQREEQG
DESNGVQSEALMRGSSASTTERKDGAVSKRKPQGANQVPPPGEQRPPSPPGPPPSALLPG
NAQQAGSETQPSQDISPAVAAALLQLISQQDSDAVAPPHSKDPSPAAEARGPPPPPWMAD
SSPKPSAAAEATAGPNTAAQFPKDQDLRFSHGAAR
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtcggaccgacaccatgggaccaagaggaagccggaatccagcagtcttagc
ggcgtgccacagcagacccaggcctcgactcgtacctccgctggagacaagacgagcaag
gaaggcaaggtgcatggcaaatcttcaatgtcctcttctaatacaaaacgcaaacggcat
aaatcaaccaaacataatcgggaatcctctgcatctggagccgaatatgttaccctcggc
gatgcggcgccacctggtgtcaacacggtgaagcctctcgtggagtacgacgatatcagc
tcggactcggacactttttcagacccaccgtcctccaggccctcagagagggggggcggg
gacttactggagccgtcaccagactacgataggcaggaggccggggcagaagcaggtggc
agggagaacaagggacacaaacactcccgaaaaaagcccaaggaccccaacaaagttaga
gaccctgggaatggcgaacgtggcatcaagaaaaagaacagcaaagaccacgagaaaggg
gttgctgtaaagaacaaggagaaggctgcctcctcaggtacctcctccaaacgccatgtc
cagccagagggtgactctaaacgtgcggagctgatgctcaccacacagcctgcagccagt
gtaggtagtgctacttcctccacatcctcatctcgcagcaaggaaagcagccgctcagga
aagactcgcaaagagaaagagaagcagcagcggaaagagggccgagcagcggagggcagc
caaagctcctcccagaggaaccgagcagacaggacccaccgcaaggcctccaagagcctg
aagtccagccctaagggcaagtcttcgaataggggtagcccccgcaggaagggcgcaaat
gctgctcattcacccagtcccagaagagcggctggcagcgagagtccacaggccagtggg
tatggacagcaggtggatgacacctactccaggcggagggtggcccagcagagcccaact
ccttatggggacacttcccgccgcagcagacagagatcagacagcccctatggcagcaga
caccggtcttccagctatgagagggacagcagcccatactcaaggagacgctccatcagc
ccctatggtacccgcaggtcctccagcaacagccccatgtctcgccgctctggccgctcc
aggagtcgctccccgatgcactactcaacttctcgtcgctccacctctcgtccccgtagc
aagagacatacttcctctgttgcagcgggggccagctcccacagcagtcggccaacgagc
cgctcccccccctcccgcctgccactcaactccagcctgggagcagaactaagtcgcagg
aagaaggaacggcaggcggctgaggcagctgctcgtgctagtggtggtgctgccacccct
cctccggcagtacgtaaatctgcaggcacctccgccctaaggccctctaaacctgcaccc
ccccaaccagaaaaagactctgcaacaccagctgaacctctgcctgcaccacctgcgccc
ttatcccaggatgctcccagcgctgaagatcagttctctgcacctctaccttcctcttcc
acctcatctcctgcacctcctcctccctctcctcctgcgccacccgccccagccatccag
attcctccaccgcaacctcaggccgaagcaagtattcagcctcctacaccctcaaccata
tcccaggccaaatctccagctccggctcctccatgcagccctgtccgccagatgcccctt
cacaagacgtcgactctgcctctcctgcctttaccacctgcactgctgggaaacactcag
gggagtccaaagaagtccacccctcctcagaggccatccaggaaggagaaggaagttcgc
agccggacatcactgatcgaccttcctttaccaccctgcctgcctggaggtgactcctca
cccccacagtgccccatccgccaggccacaccgctacccccggcagtccttaagaagaga
ccaaagatttgctgcgcgcgatatggtgagcgcaaacacacccagagtgactggggcaaa
cgctgtgtagataaattcaatattattggcatcataggggaaggcacctacggccaagtg
tacaaggccaaggacaaagaaactggtgaactggtcgctctgaagaaagtacgtttggac
aatgaaaaggagggcttccccatcacagccatcagagagatcaagatcttgcggcagctc
aaacaccgaagtgtggtcaacatgaaggagattgtcactgacaagcaggatgcacttgac
ttcaagaaggacaaaggtgctttttacctggtgtttgagtacatggaccatgacctgatg
ggcctgctggagtcgggcctggtccagttctcccatgagcacgtccgcagcttcatgcgc
cagctgatggaggggctggactactgccacaagaacaactttctgcacagagacatcaag
tgctccaacatactgctcaacaacagaggtcagatcaaacttgcagactttggtttggct
cggctttacagttcagaggaaagtcggccgtacactaataaagtaatcacactatggtac
cgcccccctgaactcctgctgggagaggagaggtactctccagccatcgatgtatggagc
tgtgggtgtattctgggagagctctttaccaagaagcccatcttccaggctaaccaggag
cttctacagctggagcatatcagccgtctgtgtggtagtccctgtcctgcagtctggccg
gacgtcattaaacttcccctcttcaacaccatgaaacccaagaagcagtacagacggcgc
ctgcgggaggagtttgcctttttaccttctgctgccctggacctgctggaccgaatgctg
acccttgaccccgggcggcgctgctcagcagagcaagctcttgtcagtgacttcctgagt
aatgttgagcccaacaagatgccaccgccagatcttcctcaccatcaggactgccacgag
ctgtggagtaagaagagacgacgtgcacgtcagagcggggtgcccgaggatgtgcccaaa
gtgccccgtaaggaaacgacagggacctcgagcggggagaacagccggccccaaagcagc
ccggctgtacccccaccgcctcccccaggaaaaccgccccccccagtcaccttagagagt
gagttgtcaggcctgggagtagcagcagaccagttgaacccgacagagctggccgtgctg
atgaacctcctccaggggcagacggacctcagcctgccccaggtggcccagctcctcaac
ctctccaccccagagactctcagccagtcgctgtcagccctcagtgaggcctctgaccag
cagggggctccagaagaccaggcccccactgctgccaggtcccagcccccggagccgccg
cctgaaccccgggaaccctcgccgacatccggagaccccgcgctcagccaggaggaccag
gccaacctgctcgctctccttttgggccacatcattaagccccaaagggaggagcaaggc
gatgagagcaatggtgtccaatcagaggcactaatgcgcggctcgtccgcctctactact
gaacgcaaggatggtgcagtatcaaaaaggaaaccgcagggtgccaaccaggtgcctcca
cctggggagcagcgtcccccctctccacccggtcctcctccatcggctctcctccctgga
aatgcccagcaggccgggtctgaaacccagcccagccaggacatcagccctgctgtggca
gctgctttgctccagctcatctcccagcaggactcggatgctgtggcccccccgcacagc
aaggacccctctcctgctgcagaggcccggggaccgcctcctccaccctggatggctgac
tcctcacctaaaccttcggctgcagctgaggccacagcaggaccgaacacagcagcacag
ttccccaaggaccaggacctccgcttctcccatggagctgcccgctga
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