Trematomus bernacchii (emerald rockcod): 117492515
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Entry
117492515 CDS
T09643
Symbol
esr1
Name
(RefSeq) estrogen receptor
KO
K08550
estrogen receptor alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
117492515 (esr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117492515 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tben03310
]
117492515 (esr1)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
117492515 (esr1)
Nuclear receptors [BR:
tben03310
]
3. Estrogen like
3A. Estrogen receptor
117492515 (esr1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
zf-C17orf113
Motif
Other DBs
NCBI-GeneID:
117492515
NCBI-ProteinID:
XP_033998695
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MLLRQSPAQSRQPCGPALRPRISPAFPELETLSPQRPSPPPRAPFSDMYPEESRGSGATV
DFLEGTYDYAAPTPAPTPLYSHSTVGFYSPPLDAHGQPSDGSLQSLGSGPASPLVFVPCS
PRLSPFMHPPNHHYLETTSTVYRSSLQSVSREDLCGTSDESFSVGESGAGAGAGAGGFEM
VKETRFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDRNRRKSCQ
ACRLRKCYEVGMMKGGVRKDRGRVLRRDKGRTDTTGKDKASKDLEQRTVPPVDRRRRSSA
CGGGVRSTLNGMPPDQVLLLLQGAEPPTLCSRQKLSRPYSEVTVMTLLTSMADKELVHMI
AWAKKLPGFLQLGLHDQVHLLESSWLEILMIGLVWRSIHCPGKLIFAQDLILDRNEGNCV
EGMAEIFDMLLATASRFRLLKLKPEEFVCLKAIILLNSGAFSFCTGSMEALHDMAAVQIM
LDTITDALIHHISQSGGSVQQQSRRQAQLLLLLSHIRHMSNKGMEHLYSMRCKNKVPLYD
LLLEMLDAHRLDRPGQPWTQADGESPPSGSGGGPRICNESASRAPTVLQYGGSRSDCTPI
L
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgttgctcaggcagagcccggcacagagcaggcagccgtgtggaccagcactcagaccc
aggatcagcccagccttcccagagctggagaccctctccccgcagcgaccctcgcctcca
ccgcgggcccccttcagtgacatgtaccctgaagagagccgggggtctggagccactgtg
gacttccttgaagggacctacgactatgcggcccccacccctgccccgacccctctctac
agccactccacggtgggcttctactctcctcctctggacgcccacggacagccctcggat
ggcagccttcagtccctggggagtgggccagctagtcctctagtgttcgtgccctgcagc
ccccgactcagcccctttatgcacccccccaaccatcactatttggaaaccacctcaact
gtgtacaggtccagtctgcagtcagtttccagagaggacctgtgcggcaccagcgacgag
tcgttcagcgtgggggagtcgggggccggggccggggccggggccggggggtttgagatg
gtcaaagaaacgcggttctgtgccgtgtgcagcgactatgcttctgggtatcactacggg
gtgtggtcctgtgagggctgcaaggccttcttcaagaggagcatccagggtcacaatgac
tatatgtgcccagcaaccaatcagtgtactatcgacaggaatcggaggaagagctgccag
gcttgccgtcttaggaagtgctacgaagtgggcatgatgaagggaggtgttcgtaaggac
cgcggtcgtgttttgcggcgtgacaaagggcggacggacaccactggtaaagacaaggcc
tctaaggacctggagcagaggacagtgccccctgttgacaggaggaggcgcagcagtgct
tgtggtggaggagtacgatcaacactgaatggcatgcctcctgaccaggtgctcctcctg
ctccagggtgccgagcccccaacactgtgctcccgtcagaagctgagcagaccctactcc
gaggtcaccgtgatgacgctgctcaccagcatggccgataaggagctggtccacatgatt
gcctgggccaagaagcttccaggcttcctgcagctggggctccatgaccaggtgcatctg
ctggagagctcctggctggagattctgatgatcgggctcgtctggaggtccatccactgc
cccgggaagctcatctttgctcaggacctcatactggacaggaacgaaggaaactgtgtt
gaaggcatggcggagatcttcgacatgctgctggcgacggcttcacgcttccgcttgctc
aaactcaaacccgaggagtttgtctgtctcaaagccatcatcttgctcaactctggggcc
ttctctttctgcaccggctccatggaggccctccacgacatggcggcggtgcagatcatg
ctcgacaccatcacagatgctctcatacatcacatcagccaatcaggaggctcggtgcaa
cagcagtccaggcgacaggcccagctgctcctcctgctctcacacatcaggcacatgagc
aacaaagggatggagcacctctacagcatgaggtgcaagaacaaggtgccgctgtatgac
ctgctgctggagatgctggacgctcaccgcctggaccgcccaggccagccctggacccag
gctgacggagagtccccccccagcggcagtggaggaggaccacgaatctgcaatgagagc
gccagcagagccccgacagtcctgcagtacgggggctcccgctcggactgcacccccatc
ctatga
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