Trematomus bernacchii (emerald rockcod): 117492535
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Entry
117492535 CDS
T09643
Symbol
rtel1
Name
(RefSeq) regulator of telomere elongation helicase 1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tben03032
]
117492535 (rtel1)
Enzymes [BR:
tben01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
117492535 (rtel1)
DNA replication proteins [BR:
tben03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
117492535 (rtel1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ARCH_RTEL1
HHD_RTEL1
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
117492535
NCBI-ProteinID:
XP_033998745
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MTSLTLKGVTVNFPFVPYDCQKDYMSKVIECLQEKANGVLESPTGTGKTLCLLCATLAWR
ERFKDTISARKITEKLKGEEMFSNTPLSSWGTAATDGDTPTYYTDVPKIIYASRTHSQLA
QVIKELKNTSYKPKVCVLGSREQLCINPEVMKQQSNHVKVHSCRAKVSTRSCVYYNNVEE
KSTDKELVNSVLDVEDLVKFGNKQRVCPYYLSRSLKQQADIVFTPYNYLLDPKSRRAHNI
ELNGAVVIFDEAHNVEKTCEESTSFDLTPYDVASAITAVDRLLAEQAKEASHGDTVSDFN
VESLNSGLKLELATIAKIKQILLDLETVIDSYDVPNEVGITKPGIFIYELLERAHLTYSS
KTAVQEALEQITGYLAGQPGVFVNTSGLQQLTNIIQLVFCGEPSEKEKQQQMETNTAHFK
VHIHQDTSHQKKNQSTDVWASSSSSSKKQGNILSYWCFSPGYSMQSLVDQGVRCIILTSG
TLSPLSSFTSEMRIKFPVSLENSHVIERDQIFVSVIERGPDGEQLSSAFARRFIPENMSS
LGKTVANLSRVIPHGLLVFFPSFSVMETTLDFWRANGHADRIETVKPMFVEPRGKGTFNE
VMDGYYNKVNDPSSKGGSFFAVCRGKASEGLDFADTFGRGVVITGLPFPPRMDPRVVLKM
QFLDEMCRKKAPGVKYLSGQEWYSQQAFRAVNQAIGRVIRHKDDYGAILLCDQRFKSSNA
RAQLPSWVRPYVRVYSSFGNVIRDLSQFFRVAQKLRPVAEKKGAAESCEAVCLSAPLSSC
STSCSPSQSSITQKAKVLDAHLPSLKRRRLNDHSGAAGMARICVEYECELQESQRRPANL
LDALERGDHHSGEDEGAAVGEEKANHLSTLSLQCDKRMDDEMRGGKRKIKLVQQQKSQVS
EVVSGEGTSSRVKGFLAEMKKSLSQCNFEQIVQTLQTYKKTDDLDVLLTDTAVLTEDANT
YSLLRGLYQFIRPHHKQRFDERCRELTAGGCGYEPSHSLSVEEKKALLNSAAIRRPAVGV
KPPPSPSTSTCSQLNTEQLNKGGLHLSQRPHTGPALKSEAHASFQADVKKAIGAEKTALL
LQAIQSYKRSDCYEALVGTAVSLFTERDQDFQLLVRFGTFIPPRHKKQYKEMLQALTGQS
SSAEVPAVTEDEQRHASSSPPLKTQSKISSFFSSSQRK
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgacttcactcactctgaaaggagtgacagtgaacttcccatttgttccatatgactgt
cagaaggactacatgagcaaagtgatagagtgtctccaggagaaggccaatggggttctg
gagagtccgacaggtaccggtaaaactctgtgcctgctctgtgccaccctggcctggagg
gagcgcttcaaggacaccatctctgctcgcaagatcacagagaagctgaaaggagaggag
atgttctccaacaccccgctgtcctcctgggggacggctgccacagacggagacacacca
acctactacactgatgttcccaagatcatttacgcatccaggacacactctcagctggct
caggttatcaaggagttaaagaatacttcctacaagccaaaggtgtgtgttctgggatcg
agagagcagctgtgtatcaaccctgaagtcatgaaacagcagagcaaccatgttaaggtc
cattcgtgcagagccaaagtttccacaagatcatgtgtctactacaataacgtggaagag
aagagcactgacaaagagttggtgaattcagtcctcgacgtggaagacttggtcaaattt
ggcaacaaacagagggtctgtccttactacctgtcccggtccctgaagcagcaggcagac
attgttttcacgccgtacaactacctgctggatccaaagagccgcagagcgcacaacatc
gagctgaacggagcggtggtcatcttcgatgaagctcacaatgtggagaagacgtgtgaa
gaatccacatcctttgacctgactccatatgatgtggcctccgccatcactgctgtggac
cggctgctggcggagcaggcgaaagaggccagccatggagacactgtcagtgacttcaac
gtggagtccctcaactctggtttaaaattggaattagctaccattgctaaaattaaacag
atactgctggatctggaaaccgtcatcgattcctatgatgttccaaatgaagtaggcatc
acaaaacctggaatcttcatctatgagctgctggagagagcccatctgacctacagctcc
aagacggctgtgcaggaggctctggagcagatcactggatacctcgcaggacagccgggg
gtgtttgtgaacacaagtggactgcagcagctgactaatatcatacagctggtgttctgt
ggggaaccatcagaaaaggagaaacagcagcagatggagaccaacacggctcattttaag
gttcatatccatcaagacaccagccatcagaagaaaaaccagagcacggatgtctgggct
tcatcatcatcatcatcaaagaaacaaggcaacatcttgagttactggtgcttctctccg
ggctacagcatgcagagcctggtggatcaaggggtccgctgcatcattctgaccagcggg
accctctcccccctctcctccttcacctctgagatgaggataaagttccctgtgagtctg
gagaacagtcatgtgatcgagcgggaccagatctttgtgagcgtcatcgagcgcggcccg
gatggagagcagctcagctcagcgtttgctagaagatttattcctgaaaacatgtcatct
ttaggcaaaacagttgctaacctgagccgagtgattcctcatggcctcctggtgttcttt
ccatccttctctgtgatggaaacaaccctggacttctggagagctaacggacatgcagat
cgcattgagactgtaaagcccatgtttgttgaacctagaggaaagggcacctttaatgag
gttatggacggatattacaacaaagtcaatgatccatcatccaaagggggaagctttttc
gctgtgtgtcgaggaaaggcgagtgagggtctggattttgcagacacctttggtcggggt
gtggtcatcaccggccttcctttccccccgaggatggaccctcgagtcgtcctgaagatg
cagttcctggatgagatgtgtcggaagaaagctcctggggtgaagtacctgtctgggcag
gagtggtacagccagcaggctttcagagctgtgaaccaggccattggcagagtcattcgc
cacaaggacgactacggagccatcctgctgtgtgatcagaggtttaaaagctctaatgca
cgggcccagcttccctcctgggtcaggccttacgtgcgtgtgtacagcagctttgggaat
gtgatccgagacctgtcccagttcttcagggtggcccagaaactgaggcctgtggcagag
aagaagggtgcagcagagagctgtgaggcagtgtgtctatcagcccctctgtcctcctgc
tccacttcctgctcaccatcccaaagctccatcacccagaaggccaaggtgctggacgcc
cacctccccagcctgaagaggaggagactgaatgaccactctggagccgctgggatggcc
aggatctgtgtggagtatgagtgtgagctgcaggagagtcagaggaggcccgccaacctg
ctggatgctctggagcggggggaccaccacagtggggaggacgagggtgctgctgtggga
gaagagaaggcaaaccatttgtccacactgtctctgcagtgtgacaagaggatggacgat
gaaatgcggggaggaaaacgtaaaatcaaacttgtccagcaacagaagtcgcaggtgtcg
gaggtggtctctggggaggggacctccagcagggtgaagggtttcctggcagagatgaag
aagtctctgagccagtgcaactttgagcagatcgttcagactctgcagacctacaagaag
actgacgacctggatgtgctgctgacggacacagcggtgctgacggaggacgccaacacc
tacagcctgctccgcggcctgtaccagttcatccggccccatcacaagcagaggtttgac
gagcggtgcagggaactgacggcggggggctgcggctacgagcccagccactctctgtct
gtggaggagaagaaggccctgctgaacagcgctgcaatcagacggcctgctgtgggtgtg
aaaccccccccctccccctccacctccacctgcagtcagctgaacacagagcagctcaac
aagggaggactccacctgagccagaggcctcacactggtcctgctctgaagagtgaggcc
cacgcttcctttcaggctgatgtgaagaaggccatcggagcagagaagacggcgctgctg
ctgcaggccatccagagctacaagaggagcgactgctacgaggccctggtgggcaccgcc
gtgagcctgttcacagagagggaccaggacttccagctgctagtccgatttggcacgttt
attcccccccgccataagaagcagtacaaagagatgttgcaggctctgacgggccagtcc
tcctctgctgaggttcctgctgtgactgaagacgagcaaagacacgcttcatcttcccca
cctctcaagacccaaagcaagatttccagttttttctccagcagccaaagaaagtag
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integrated database retrieval system
