Trematomus bernacchii (emerald rockcod): 117492575
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Entry
117492575 CDS
T09643
Symbol
chrna2b
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117492575 (chrna2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117492575 (chrna2b)
Ion channels [BR:
tben04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117492575 (chrna2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
117492575
NCBI-ProteinID:
XP_033998794
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MGHNHLFSVGTAFLCSLLFCESVLCFEKTHSHAEDELFKTLFAGYNKWSRPVPNISDVVI
VKFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWKPSDYDNVTSIRVPSELLWVPDI
VLYNNADGEFAVTHMTKAHLFHNGKVRWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWT
YDKAKIDLEKTEAVDLNNYWESGEWAIINAVGTYNTKKYDCCHEIYPDITYFFIIRRLPL
FYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIP
LIGEYLLFTMIFVTLSIVITVFVLNVHHRSPSTHKMPRWVHSVFLDMIPRWLFMRRPAPD
VRRRRLLLLQQEAAADRRQARLAGFKHGNCLSTSANWLRDGTSSEDPERSSYEDLELGTL
TSYFSFRPPSPRPPGSTPPTQQKNQQNSQNQQEGATGANRQRLNTIQRAIKGDNTVSDSS
FLLSPSVIRALEGVHYIADHLRAEDADFSVKEDWKYVAMVIDRIFLWMFIIVCLLGTIGL
FLPPWLAGMI
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgggacacaaccacctgttctctgtggggacggcttttctctgctccctactgttttgt
gagtcagttctttgttttgagaagacccactcgcacgctgaggatgagctcttcaagacg
ctgttcgccgggtacaacaagtggtcgagacccgtgcccaacatctctgacgtggtcatc
gtcaagttcggactgtccatcgcacagctcatagatgtggatgagaagaaccaaatgatg
acaaccaacgtgtggcttaaacaggagtggaatgactacaaacttcgctggaaaccgtcc
gattacgacaatgtgacgtccatcagagtgccgtcagagctcttatgggtgccagacatc
gtcctctacaacaacgctgatggcgagtttgctgtgacccacatgaccaaagctcaccta
ttccacaacggtaaagtccgctgggtgcctcctgccatctacaaaagctcctgcagcatc
gacgtcaccttcttccccttcgaccaacagaactgcaaaatgaaatttggctcgtggacg
tacgacaaggccaagattgacctggagaaaacggaagcagtggacctgaacaactactgg
gagagcggcgaatgggccatcatcaacgcagtggggacgtacaacaccaagaaatacgac
tgctgccacgagatctacccagacatcacctactttttcatcattcggaggctgcccctg
ttttacaccatcaacctcatcatcccctgcctgctcatctcctgcctcactgttctggtg
ttctatctgccctcagactgcggggagaagatcaccctgtgcatctccgtgctgctgtcc
ctcactgttttcctcctcctcatcaccgagatcatcccctccacctccctcgtcatccct
ctgatcggagagtacctcctcttcactatgattttcgtcaccctctccatcgtcatcact
gtgttcgtgctcaacgtgcaccatcgctctcccagcactcacaagatgccccgctgggtc
cactccgtgttcctggacatgatcccgcgctggcttttcatgcggcggcccgcgccagat
gtccgccgtcgcaggctgttgctgctgcagcaggaggcggcggccgaccggaggcaggcc
cgattggccgggttcaaacatggcaactgcctcagcacctcggccaactggctaagagac
gggacatcctcagaggaccccgagagaagctcttatgaggacttagagctggggaccctg
acgtcatatttctcctttcgccctccttcgcccagacctccggggtccactcccccgacc
caacagaaaaaccaacagaacagccagaaccagcaggagggggcgacgggggcaaacaga
cagagactcaataccattcagagggccattaaaggagataacacagtatcagactcatct
ttcctgctctcaccaagtgttatacgtgctctggaaggtgtgcactacatcgcagaccac
ctgagggccgaggatgctgacttcagcgtgaaagaggattggaagtatgtcgccatggtg
attgaccgcatcttcctgtggatgttcattattgtgtgcctgcttgggaccatcggcctc
ttcctacccccttggctagctggcatgatctag
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