KEGG   Trematomus bernacchii (emerald rockcod): 117492593
Entry
117492593         CDS       T09643                                 
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04137  Mitophagy - animal
tben04144  Endocytosis
tben04145  Phagosome
tben04148  Efferocytosis
tben05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:tben00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117492593 (rab5c)
   04145 Phagosome
    117492593 (rab5c)
   04137 Mitophagy - animal
    117492593 (rab5c)
   04148 Efferocytosis
    117492593 (rab5c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117492593 (rab5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tben04131]
    117492593 (rab5c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tben04147]
    117492593 (rab5c)
   04031 GTP-binding proteins [BR:tben04031]
    117492593 (rab5c)
Membrane trafficking [BR:tben04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    117492593 (rab5c)
 Endosome - Lysosome transport
    117492593 (rab5c)
Exosome [BR:tben04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117492593 (rab5c)
  Exosomal proteins of other body fluids (saliva and urine)
   117492593 (rab5c)
  Exosomal proteins of colorectal cancer cells
   117492593 (rab5c)
  Exosomal proteins of bladder cancer cells
   117492593 (rab5c)
GTP-binding proteins [BR:tben04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    117492593 (rab5c)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 117492593
NCBI-ProteinID: XP_033998822
LinkDB
Position
Unknown
AA seq 220 aa
MAGRGGPARTNGTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAIDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGAAGAGGRARGGVDLQEAAPQGRSGQCCGGGN
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcagggcgaggcggaccagcacggaccaacggcaccgcagcgagcaacaagatctgc
cagtttaagctggtgctgctgggggagtccgcggtggggaagtccagcttggtgctgcgc
tttgtcaagggccagttccacgagtaccaggagagcaccatcggagctgccttcctcaca
cagacggtatgtttggatgacacaacagtgaagtttgagatctgggacactgccggacag
gagcgatatcacagcttggcgcccatgtactacaggggagcccaggccgccatcgtggtc
tacgacatcaccaacacagatacattcacacgtgcaaagaactgggtgaaggagctccag
cgacaagccagcccgaacattgttatcgcactggcaggaaacaaagccgacctggccaac
aagagagccatagatttccaggaagcacaagcctatgcagatgacaacagtttgctcttc
atggaaacttccgccaagactgctatgaatgtcaatgagatttttatggctatagccaag
aagctccctaagaacgagcctcagggtgcagcgggggccggcgggcgggcccgaggcggc
gtggacctgcaggaagctgcaccgcagggcaggagtggccagtgctgtgggggcgggaac
taa

DBGET integrated database retrieval system