Trematomus bernacchii (emerald rockcod): 117492593
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Entry
117492593 CDS
T09643
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04137
Mitophagy - animal
tben04144
Endocytosis
tben04145
Phagosome
tben04148
Efferocytosis
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117492593 (rab5c)
04145 Phagosome
117492593 (rab5c)
04137 Mitophagy - animal
117492593 (rab5c)
04148 Efferocytosis
117492593 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117492593 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117492593 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117492593 (rab5c)
04031 GTP-binding proteins [BR:
tben04031
]
117492593 (rab5c)
Membrane trafficking [BR:
tben04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
117492593 (rab5c)
Endosome - Lysosome transport
117492593 (rab5c)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117492593 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
117492593 (rab5c)
Exosomal proteins of colorectal cancer cells
117492593 (rab5c)
Exosomal proteins of bladder cancer cells
117492593 (rab5c)
GTP-binding proteins [BR:
tben04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
117492593 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
117492593
NCBI-ProteinID:
XP_033998822
LinkDB
All DBs
Position
Unknown
AA seq
220 aa
AA seq
DB search
MAGRGGPARTNGTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAIDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGAAGAGGRARGGVDLQEAAPQGRSGQCCGGGN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcagggcgaggcggaccagcacggaccaacggcaccgcagcgagcaacaagatctgc
cagtttaagctggtgctgctgggggagtccgcggtggggaagtccagcttggtgctgcgc
tttgtcaagggccagttccacgagtaccaggagagcaccatcggagctgccttcctcaca
cagacggtatgtttggatgacacaacagtgaagtttgagatctgggacactgccggacag
gagcgatatcacagcttggcgcccatgtactacaggggagcccaggccgccatcgtggtc
tacgacatcaccaacacagatacattcacacgtgcaaagaactgggtgaaggagctccag
cgacaagccagcccgaacattgttatcgcactggcaggaaacaaagccgacctggccaac
aagagagccatagatttccaggaagcacaagcctatgcagatgacaacagtttgctcttc
atggaaacttccgccaagactgctatgaatgtcaatgagatttttatggctatagccaag
aagctccctaagaacgagcctcagggtgcagcgggggccggcgggcgggcccgaggcggc
gtggacctgcaggaagctgcaccgcagggcaggagtggccagtgctgtgggggcgggaac
taa
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