Trematomus bernacchii (emerald rockcod): 117492605
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Entry
117492605 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: ADP-ribosylation factor-binding protein GGA1-like
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117492605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117492605
Membrane trafficking [BR:
tben04131
]
Endosome - Golgi transport
Others
GGA
117492605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
GAT
Alpha_adaptinC2
GGA_N-GAT
Cytochrom_C_2
ImmE5
Mac
PCRF
Hrs_helical
Ferritin
Motif
Other DBs
NCBI-GeneID:
117492605
NCBI-ProteinID:
XP_033998846
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MAAPPDTESLESRINRATNPLNRDTDWSSIHAFCDQLNNDLEGPQLATRLLAHKIQSPQE
WEAMQALLVLENCMKSCGKRFHSEVGKFRFLNELIKVVSPKYLGSRSPEPVKNKVLELIF
SWTLGLPDEAKITDAYQMLKKQGIIKQDPELPPDKLLTLPPPRPKNAIFEDEEKSKMLSR
LLNSSHPDDLKAANKLIKEMVQEDQKRAEKVSKRVNAIQEVNESVSLLTQLLQDHEPTAD
NQSNAELLQDLYQRCEKMRPTLFRLASDTEDNDEALAEILQANDTLTQVINQYKQQVKGE
IVNGNNTLNTHKQTGGTALLDLSGLDTSPQSPPSFPEFPTPTDNAPSQEMGISLLDDELM
SLGLSEGTHTSNPPSQPEDSTAWDSFQSSDSIDADIPAAPSLLLTPDPPLPLLPLSSLSL
PLSPVSTPGNSALDELDLLGKTLMQQSLPPEDQQVKWDKQLCKPTLRDLQSKSGCTITPI
PIPTFVSDPPAPLLSSQPSLAASLLEMSPTHTEAAEVSLTDVFVPLESIKPSSLLPVTVF
DGHSLRVLFHFARDSPPSRPDVLVVIISMLSSAPLPVSNINFQTAAPKCMAVKLQPPSGT
ELPAFNPVLPPAAVTQILLLANPNKDKVQLQYTLTFTMGGQQQHSEAGAVEQFPPAETWG
SL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgccgcccgacacggagagtttggagtctcgtatcaacagagccacaaaccct
ctgaacagagacaccgactggagcagcatccatgccttctgtgaccagctcaacaatgac
ctggagggaccccagctggccaccagactgctggctcataagatccagtctcctcaggag
tgggaggccatgcaggcgctgctggttctggagaactgtatgaagagctgtgggaaaagg
tttcacagtgaagtgggcaaattccggtttctcaatgaactcatcaaagtagtttctcca
aagtacctgggctcacggtcacctgagccggtaaaaaataaggttctggagttgatcttc
agctggactctgggtttacctgatgaggccaagatcacagacgcttatcagatgctgaag
aaacaaggtattattaaacaagaccccgagctgccgcctgacaaactcctgacccttcct
cctcccagacccaagaatgcgatttttgaggacgaggagaagtcaaaaatgctgtctcgc
ctgttgaacagctcgcaccccgatgacctaaaagctgccaacaaactcatcaaggagatg
gtccaagaggatcagaagcgagcggagaaggtttcgaagcgagtgaacgccatccaggag
gtgaacgagagcgtctctctgctgactcagctcctgcaggaccacgagcccaccgccgac
aatcagagcaacgccgagctgctgcaggacctgtaccagcgctgtgagaaaatgagacct
acactgttcagactggcgagcgacacggaggacaacgacgaggctctggctgagatcctg
caggccaacgacaccctgactcaggtcatcaaccagtacaagcagcaggtgaagggggag
atcgtcaacggcaacaacacgttaaacacacacaagcaaacaggagggacggccctgctg
gatctgtcggggttggacacatcgcctcagtcgccgccatctttcccagagttccccact
cccacagacaacgccccctcgcaggagatggggatcagtctcctggacgacgagctcatg
tcactcggtttaagtgaaggaacacacacctccaaccccccctcacaacctgaagactcc
acagcctgggactccttccagtcctctgacagtatagacgcagacatcccagcagccccg
agcctcctcctgactccggacccccccctccctctcctccccctctcctccctctctctc
cccctctcccccgtctcaacccccggtaactccgccctggacgagttggacctgctgggg
aagacgctgatgcagcagtccctgcctccagaggaccagcaggtcaaatgggacaagcag
ctgtgcaaacccactctgagagatctgcagagcaagtctgggtgcaccatcacccccatc
cccatccccaccttcgtatccgacccccccgctcctctgctcagctctcagcccagcctc
gcagcctcgttgctggaaatgtccccgactcacaccgaggctgcagaagtctcactgacg
gatgtttttgtaccgctagaatccattaagcccagcagtctgttaccggtgacggtgttt
gacggacacagtctgcgggttctcttccacttcgctcgggactcgcccccctcccgcccc
gacgtgctggtggtgatcatctccatgctgtcctccgccccgctccccgtctccaacatt
aacttccagactgcggctccaaagtgtatggcggtgaagctgcagcctccgtcaggaaca
gagctcccggcgttcaaccccgtcctccctcctgctgccgtcacacagatcctgctgctg
gccaacccaaacaaggacaaagtgcagctgcagtacaccctgaccttcaccatggggggg
cagcagcagcacagtgaggccggcgctgtagaacagtttcctcctgcagagacatggggg
agcctatag
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