Trematomus bernacchii (emerald rockcod): 117492759
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Entry
117492759 CDS
T09643
Symbol
ppfia3
Name
(RefSeq) liprin-alpha-3
KO
K26226
liprin-alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117492759 (ppfia3)
Membrane trafficking [BR:
tben04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117492759 (ppfia3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
Tc-38
Motif
Other DBs
NCBI-GeneID:
117492759
NCBI-ProteinID:
XP_033999032
LinkDB
All DBs
Position
Unknown
AA seq
1245 aa
AA seq
DB search
MMCEVMPTISEDGRGGGSGSSSPGGGGGGMGGGVGGIGGYGNRDSRGSGSGVGVSDEGGS
TGNLESLMVNMLTERERLIDSLRETQDSLGTAHLRLRDLGHEKESLQRQLSIALPQEFAV
LTKELNLCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQSQSPA
GVSSEVEVLKALKSLFEHHKALDEKVRERLRVALERVASLEEELQSSSQEVLSLREQIKR
RTQGIENGKERLPNGPSTILDEVDVDRQREGEIERQRSELGQLKERLALMCRQVGEIEEQ
LTSARRELARSEEANQKLQRDVKEALCQREDMEERITTLERRYLSAQREATSLHDTKDKL
ENELASKDSLYRQGEEKNRQLQERLDDAKQKLQQTLQRAETLPEIEAQLAQRVAALNKAE
ERHGNFEERLRQMEAQLEEKNQELQRARQRERMNDEHNKRLSDTVDKLLSESNERLQLHL
KERMAALEEKNALSEELSNMKKLQDDLLANKDQLIAELERLQLELDQLRARPGGSYSSRS
LPGSALELRYSHGSGSLPTGSTSHLDHFGNASTGGVVRRSHRARWSSAREDSTKNYSSTL
CVQYPEWESGALLGTGFEPGLDVGCSDDEDDGDPRFGSELMSPSGQTDVQTLAIMLQEQL
EAINKEIKMIQEEKENTELRAEEIECRVTALDSPPIPPSTLGRDSTGRGFIPTSITSSTL
ASPSPPSSGHSTPRLPHSPARENDRQNSKDDDRSLALLDSTPPSTPRALRLERMTLTHPG
AMLDDPREFRSLSADGSSSNSSQDSLHKSSKKKSIKSSIGRLFGKKEKGRMGQPGREGSS
SLASTPSEDSASGDAMGISKTGTLGPADKDRRSKKKHELLEEACRQGLPFASWDGPTVVS
WLELWVGMPAWYVAACRSNVKSGAIMANLSDTEIQREIGISNPLHRLKLRLAIQEMVSLT
SPSAPASTRSSTSNVWMTHAEMETLNAATKPQELNEFSWDQILAYGDMNHEWVGNDWLPS
LGLPQYRSYFMESLVDARMLDHLTKKELRGQLKMVDSFHRVSLHYGIMCLKRLNYDRKEL
ERRREESVHQNKDVMVWSNERVMCWVQNIGLKEYGDNLRESGIHGALLALDDTFDFTDLA
LLLQIPNQSTQARQLLEQEYNSLLAMGTERRPDEDGVKTFSRSPSWRKMFRETDLRGVTS
DSAETLPANFRASAISTPSVTLRKVQSDASSAARGESASVRTYSC
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatctccgaggacgggcgcggaggaggaagcggctcg
tcttcccctggggggggcggaggaggcatgggcggaggtgttggaggcatagggggctac
ggtaacagggattcccgcggcagtggtagtggggtcggcgtcagtgatgaggggggcagc
accggcaacctggagtctctgatggtgaacatgctgacggagagggagcggctgattgac
agcctgagggagacccaggacagtctggggaccgcccacctccgcctgcgagacctgggc
cacgagaaggagtcgctccaaaggcagctgtccattgccctgccacaggagtttgcagtg
ctgaccaaagagctgaacctctgcagggagcagctgctggagcgagaggaggagatagca
gagctgaaggcggagcggaacaacacacggctgctgctcgaacatctggagtgcctggtg
tcccgtcacgagcgcagcctgaggatgacggtggtgaagaggcagtcccaatctccagcc
ggggtctccagtgaggtggaggtcctcaaagcactcaaatccctgtttgagcaccacaaa
gctctggatgagaaggtgagggagagactacgggtggctctggagcgagtggcatcgctg
gaggaagagctgcagtcctcctctcaagaggttctgtctttaagggaacaaatcaagcgg
cggacgcaaggaatagaaaatggcaaagagcggcttcccaacggaccgtcgaccatcttg
gatgaagtagacgtggacaggcagcgagagggcgagatagagcggcagaggtcagagctg
ggtcagctgaaagagaggctggctctcatgtgcagacaggtcggggagattgaggaacag
ctgacgtccgccaggcgggagctggcccgatcggaggaggccaaccagaaactacagagg
gacgtgaaagaggcactctgtcaaagggaagacatggaagagagaatcaccacattagaa
cgcaggtacctgagcgcccagagggaggcgacgtctctccacgacacaaaagataaactg
gagaatgagttggccagcaaagactctctgtacagacagggcgaggagaagaaccggcag
cttcaggagcgcctggatgatgccaaacagaagctgcagcaaactctgcagagagccgag
acgctgccagaaatcgaggcccagctcgcacagagagtggcagcactcaacaaggcggag
gagcgtcatggtaactttgaggagcgactgcgacagatggaggcgcaactggaggagaag
aaccaggagctacagagggcgaggcagagggagaggatgaacgatgaacacaacaagcgt
ctctccgacacagtggacaagctgctgtctgagtccaacgagaggctgcagctccatctg
aaggagaggatggccgctctggaagaaaagaatgccctgtctgaagaactatccaacatg
aagaaactccaggatgatctcttagcaaacaaggatcagctgatagcggagctggagcgg
ctgcagctggagttagatcagctgagagcgaggcctgggggctcttattccagtcgctcc
ctgccaggtagcgctctggagttgcggtattcccatgggagtgggtcgctcccaacaggc
tccacctctcacctggatcactttggtaacgcctccactgggggggtggtaaggcgaagt
catcgggctcgctggagctcggctagagaggactctaccaagaactacagttcaactctc
tgtgtgcagtacccagaatgggagagcggggctctgctggggaccgggtttgagccaggg
ttagatgtgggctgctcagacgacgaggacgacggggaccctcgctttggctccgagctg
atgtcccccagcggacagacggacgtgcagaccctggccatcatgctgcaggaacagctg
gaggccatcaataaggagatcaaaatgatccaggaggagaaggagaacactgagttgcgg
gccgaagagatcgagtgccgggtcacagctttggacagtccccccattcctccatccacc
ctgggaagagacagcacaggacggggcttcatccccacgtccatcacctcctccaccctg
gcctctccctcccccccgagctctggacactccacccctcgcctgcctcactccccggcc
cgagagaatgacagacaaaacagcaaagatgatgaccggtccctggctcttctcgactct
acgcctccttccactccccgtgcgctgcgactggagagaatgacgctcacccacccaggg
gcgatgctcgatgacccccgggagtttcgcagtctctccgcagatggcagcagctccaac
agcagccaagactctctgcacaagtccagtaagaagaaaagcatcaagtcttccatcggt
cggctatttgggaagaaggaaaaaggaaggatgggccaacccgggcgggagggatcttct
tctcttgcttcgacaccctctgaagactcagcctctggagacgcaatgggcataagcaag
actgggactctgggtccagcagataaagaccgccgcagcaagaagaagcatgagctactg
gaagaggcatgtcgccaaggacttccctttgcatcatgggacgggcccactgttgtatct
tggttggagctgtgggtggggatgccggcctggtacgtcgcagcctgtcgctccaacgtg
aagagcggcgccatcatggccaacctgtcggatacagagatccagcgggagatcggcatc
agtaacccgcttcaccgcctcaaactgcggctggccatccaggagatggtctccctcacc
agcccctcggcccctgccagcactcgctcttcgaccagtaacgtgtggatgacccacgca
gagatggagaccctgaacgcagccaccaagcctcaggagctcaacgagttcagctgggat
cagatccttgcctatggcgatatgaatcatgagtgggtgggcaacgactggctgcccagc
ctgggcctgccacagtaccgaagctatttcatggagtccctggtggatgctcgcatgttg
gaccacctgaccaagaaggagctgagaggacagctcaaaatggtggacagcttccacagg
gtcagtttgcattacggcatcatgtgcctgaagcgtctgaactacgatcgcaaggagctg
gagaggaggagggaggagagcgtccaccagaacaaagatgtgatggtgtggtccaatgag
cgtgtgatgtgctgggtgcagaacatcggtctgaaggagtacggcgacaacctgcgtgag
agcggcatccatggagctttgctggctttagacgacaccttcgacttcactgacctggcc
ctgctgctgcagattcccaaccagagcacacaggcccgacagctcctggagcaagagtac
aactcactcctcgccatgggaaccgaaagacgacctgatgaggatggagtgaagacgttc
agccgctcgccctcctggaggaagatgtttagagagacagaccttcggggcgtgacctcc
gactccgctgagaccctgcctgctaacttccgtgcctcagccatttccacgccctccgtc
accctgagaaaggttcagagtgatgccagctctgctgcccggggtgaatctgcctcagtg
aggacgtactcctgttga
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