Trematomus bernacchii (emerald rockcod): 117492811
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Entry
117492811 CDS
T09643
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform X1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117492811 (srebf1)
04131 Membrane trafficking [BR:
tben04131
]
117492811 (srebf1)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
117492811 (srebf1)
Membrane trafficking [BR:
tben04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117492811 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
117492811 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
117492811
NCBI-ProteinID:
XP_033999092
LinkDB
All DBs
Position
Unknown
AA seq
1235 aa
AA seq
DB search
MNSMSFDDPSLDNLDPTLSLHDPNDIDTALLSDIDDMLQLINNQDMEFGGLFDNPPYTVP
PPTQELPGLTQSIILPSPPTTTTTSVPPPPSILSSSPHLDALLGPPITRSSSTPDKAFQP
PTFQLSPLAKVPNSTQRLQPASPPQAQALRQPQVEQPQPILSPSAPAKAASPHGSPAPNP
AFTSTPQAIFTAPAPTSPPLPQPQPLPQLQSQPQQQALHIQPQSQQILINYSTVNSYTTA
SPSSVSQPTTILSSSPPSVQSMTIQAQLQGLTTTSPLMATSVSPPLQTIAPNVQQVQQVQ
QVQQVQQVQQVQQVQQVQQVQQVQQMQQVQQVQQMQQMQQVPVLLQPQFIKAESLLLTTM
ASSTSLSSTTPVQSTSLQRSLPFQAFMGGGTILTTVPVMMDTDKMPINRIAISGKPFGVP
HKGEKRTAHNAIEKRYRSSINDKILELKDLVAGSEAKLNKSAVLRKTLDYIHFLQSTNQK
LKQENMAFKMAAQKNKSLKDLVTMEVDAPADVKNELPTPPASDVGSPTSFSHCSSDSEPD
SPMVEDTKQPTVGIVDKSAAGGSAGGMLDRSRMALCTFTFLFLSLNPLAALLCASGSSSA
GSSAATPHTGRSVLGVDIAAESWGWMDWMLPTLLVWLVNGVLVSGVLVRLLVYGEPVTRP
HSGSSVLFWRHRKQADLDLARGDFAQASQNLWTCLKALGRPLPISQLDLACSALWSLLRF
CLQRLWVGRWLAARAGGLRSDRPLKEDACKSSRDAALVYHRLHQLHMTGKLNGSHLSAVH
MALSAVNLAECAGSCLPVASLAEVYVSAALRVKASMPRILHFTSRVFLSSARQACLSSSG
SVPPAMQWLCHPLGHRFFVDGDWAIRSTPKESIYSQAGNTVDPLAQVTQAFREHLLEKAL
YCVAQPQGEKSPDQGEGEYADALEYLQLLISASDAAGATSQSFAIGSNMATVTGCDPHSK
WWSSVTVVIINWLQGDDAAAERLYPTVEHLPRSLQNAESLLPKACLNTFRAVRALLSKPE
NCQLSLSYSDKASALLRDSLNLGPHCHSSSLDKVVQLLLCDLLLVMRTNVWRLQQQGAGP
AGSGLVGTSGPAGVHQASPPELQGFQQDLSSLRKLAHSFRPAMRRLFLHEATARLMAGAS
PTRTHQLLDRSLRRRATPGAKTEECETRPGQREQAEAVMLACRYLPPSFLSAPGQRVGML
ADAARTLEKLGDKRTLHDCQQMIIKLGSGTTVTNS
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcatgtcttttgacgatccttcgttggataacttggatccaactctatcgctt
catgacccgaatgatattgacacggctctcctaagcgacattgatgacatgctacagctc
atcaacaaccaggacatggagtttggaggactgtttgataaccccccatacacagtgccc
cctcccacccaagagcttcctggattgacccagtctatcatcttaccttcccctccaacc
accaccaccacttctgtacctccacctccctccatcctaagcagtagcccccacctggat
gcactcctgggccctcccatcacccgcagctcctccaccccagacaaggccttccagcct
cccacctttcagctgtcccccctggccaaggtgcccaactccacacaaaggcttcagccg
gcctcccccccacaggcccaggccctcagacagccccaggtggagcagccccaacccatt
ctcagcccgtcggccccagcaaaggcagcttcacctcatggatcaccagcaccaaaccca
gctttcacctccacgccccaggccatcttcactgcgccagcccccacatctccacctctg
ccccagccccagcccctgcctcagcttcagtctcagccccagcagcaggcacttcatatc
cagcctcagtcccaacagatcctgatcaactacagcaccgtgaacagctacacaactgcc
agtcccagcagtgtgagccaacccaccaccatcctgtcatcctcgcctccaagtgttcag
tcaatgaccatccaggctcagctccaagggctgaccaccacgtctcccctcatggccacg
tcagtgagcccgccgctgcaaacaatcgcacccaacgtacagcaagtgcagcaagtacag
caagtgcagcaagtacagcaagtgcagcaagtacagcaagtgcagcaagtacagcaagtg
cagcaagtacagcaaatgcagcaagtgcagcaagtacagcaaatgcagcaaatgcagcaa
gtacctgtgttgctgcagccgcagttcatcaaggcggagtctctgctgctgaccactatg
gcgtcctccacctccctgtccagcaccaccccagtacagagcacttcactgcagcggtct
ttgcccttccaggcctttatgggcggtggcaccatcctgaccacggtgccagtcatgatg
gacactgataagatgcccattaaccgcatcgcaatcagcggcaagccgtttggcgtgcca
cacaagggagagaagcgcacagcccacaatgcaattgagaagcgttaccgctcctctatt
aatgacaaaattctcgagctcaaagatctggtggctggttccgaggccaagctcaacaag
tctgcagtgctgaggaaaaccctcgactacatccatttcctgcagtcgaccaatcagaag
ctcaaacaggagaacatggcgtttaaaatggcagcccagaaaaacaagtctctcaaggac
ctggttaccatggaggtcgatgcaccagctgatgtgaagaatgagctgcccaccccacct
gcttctgacgtgggctcccccacctctttctctcactgtagcagtgactcagagcccgac
agtccgatggtggaggacactaagcagcctactgtgggcatcgtggacaaatccgcagca
ggaggcagcgctggtggcatgttggaccgttcccgcatggcgttgtgcaccttcaccttc
ctcttcctctctctcaaccctctggctgccctgctctgcgcatccggcagcagctcagct
ggaagctcagcagccacacctcacacaggaaggagcgtcctgggtgtggatatcgcagcg
gagtcgtggggctggatggactggatgctgccaaccttactggtgtggctggtgaacggt
gttctggtgtcgggggttctggtccgactgctggtgtatggagagcctgtaaccagacca
cactctggatcctctgtgttgttctggaggcaccgcaagcaggctgacctggacctggct
agaggagatttcgcccaggccagtcagaacctgtggacgtgtctaaaggcccttggtcgt
cccttacccatctcccagttggacctggcctgttctgcgctctggtccctgctaaggttc
tgcctccagcgcctctgggtgggccgctggttggctgccagggcaggagggctgcggtct
gaccgccccctgaaggaggacgcctgcaaaagcagccgggacgccgccctggtttaccac
cgcctgcatcagcttcacatgacaggtaagctgaatggcagccacctgtcagcagtgcac
atggctctgagtgcagtgaacctggcagagtgtgctggctcctgtctgcctgtagccagt
ctggctgaggtctacgtgtccgcagctctacgggtcaaagccagcatgccaaggatcctg
cattttacttctcgtgttttcctgagcagcgcccgccaggcgtgcctgtcgtccagcggc
agcgttcctccagctatgcagtggctgtgtcaccctctaggtcatcgcttctttgtggat
ggggattgggctattcgcagcactcctaaagaaagcatctacagccaggcaggcaatact
gtggatcctctggcccaggtgactcaggctttcagggaacacctcctggagaaagctctg
tactgtgtggctcagcctcaaggagagaagagccccgaccagggagaaggggagtatgct
gatgccctggagtatctccagttgttgataagtgcatcagatgctgctggagccacctcc
cagtcctttgccatcggctccaacatggccactgtgaccggctgcgacccccactccaag
tggtggtcctcggttaccgtggtgattatcaattggctccaaggagatgacgccgcagca
gagagactgtacccaactgttgagcacctgccgcgcagcctgcagaacgcagagagtctt
ctgcccaaggcgtgtctgaacacattcagggcggtgcgggctctgctgtccaaacctgaa
aactgccagctgagtctgagctacagcgacaaggccagcgctctgcttcgagacagcctc
aacctcggaccccactgccacagctccagtttagacaaggttgtccagttgctcttgtgt
gatctcctgttggtgatgaggaccaacgtgtggcgcctgcagcagcagggggccggtcct
gcggggtcagggttggtgggcaccagcggccctgcgggggtccaccaggcctccccaccg
gagctccaaggctttcagcaagatctcagctccctacgcaaactggcacacagcttcagg
cctgccatgcggagattgttccttcatgaagctacagccaggctgatggcgggggccagt
cccacccgcacacatcagctcctggatcgctcgctgcgacgcagggcaacgcccggagcc
aaaacagaggagtgcgagacgcggccgggccagcgggagcaggcggaggctgtgatgctg
gcgtgccgctaccttcccccctccttcctgtcggcccccggccaacgggtgggcatgctg
gcagacgctgcccgcaccctggagaagctgggagacaagaggaccctccacgactgccag
caaatgatcatcaagctgggcagcggcactactgtcaccaacagctag
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