Trematomus bernacchii (emerald rockcod): 117492938
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Entry
117492938 CDS
T09643
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117492938 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117492938 (gtf2f1)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
117492938 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
117492938
NCBI-ProteinID:
XP_033999260
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MTSLGSSSSPSTEYTVRVPKNTNKKYSIMGFNSGDKVNCSAWTQARMERDMSARRIYGEE
ESVDGAAGSEFGKKQREESRRKKYGIVKREFKVEDQPWILKVNGKAGKRFKGLKKGSVTE
NASYYIFTQCPDGAFEAFPVNGWYNFVPQAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RFREQERGCDDDDDENEKGGKKKKKGGRGGDLRITDLEEDLEMSSSDSNSSNGDDGESKP
KKKKETGKGKGKKKKKKSSDKEALEDSDDGDNEGLEVDYMSDESSSDEEPEKGKMSKGED
HPKGIDEASESEEESEEEKQNEEETKEEEEEEEAKTKTPAPAEKKKKKDSSGESETSDDS
DIEGETASALFMKKRTPPKRGGRGSAGSSKAGSRPGTPSIDSAATSNTLRAAASKLEQGK
RPPPGPSTDSPAAKRLKMEPSSQSPVPSGKSTPQPPPGKSTPSSSDVQLTEEAVRRYLIR
KPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNVNDKMHFYLTE
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgacttcactggggagcagcagttccccgtccacagaatacacagtgcgagtcccaaaa
aacaccaacaagaagtacagcattatgggtttcaattcaggagacaaggtcaactgttct
gcctggacacaggctcgtatggaaagagacatgagtgctcggcggatatatggggaagaa
gagtcggtggatggcgcggctggcagtgagtttggcaaaaagcagcgcgaggaatcacgg
cggaagaagtatggcattgtgaagcgtgagttcaaagtggaggaccagccctggattctc
aaggtcaatggcaaggccggcaagaggttcaaaggtctaaagaagggtagtgttacagaa
aacgcgtcctactacatcttcacacagtgtcccgatggggcgtttgaggccttccccgtc
aacggctggtacaactttgtaccacaggccaagcaccgaacgctcactgctgaggaggcg
gaggaggagtggggcagacgaaacaaggtggtgaatcacttcagcatcatgcttcagaga
cgtttccgggagcaggagcgcggctgcgatgatgacgacgatgagaacgagaagggtggg
aagaagaaaaagaagggagggagagggggcgatctgcgcattaccgacctggaagaagac
ctggagatgagcagcagcgacagtaacagcagtaacggggatgatggagagagcaaacca
aagaagaagaaagaaacagggaaaggaaaagggaagaagaagaagaagaagagcagtgac
aaagaggccttggaggacagtgatgacggagacaacgagggtctagaggtggattacatg
tcagatgagagcagttcagacgaggagccagagaaggggaagatgagcaaaggagaggac
caccccaaaggaatagacgaggcgtctgaaagtgaggaagagagtgaggaggagaaacag
aacgaagaggaaacgaaagaggaggaagaagaagaagaggcgaagacaaaaacgccagct
ccagcagaaaagaagaagaaaaaagacagcagcggcgagtcagaaacctcagacgacagc
gacatcgagggagagacggcctcagctctgttcatgaaaaagcgcacgcctccaaagcgc
ggaggacgcggctctgcaggaagctcaaaggccggcagtcgccccgggaccccgtccata
gactccgccgccacctccaacacactccgagctgctgccagcaagctggagcaaggtaag
agaccgcctccgggccccagcacggactcacctgctgccaagaggctgaagatggagccc
agcagtcagagccccgtcccctctgggaagagtacgcctcaacccccgcctgggaaatct
actcctagctcaagtgacgtgcagctaacagaggaggcggtgcggcgctacctgatccgt
aaaccgatgaccaccaaagacctgctgaagaagttccagaccaagcgcacgggtttgagc
agcgagcagacggtcaacgtgctggctcagatcctgaagcgcctcaatcccgagcgcaag
aacgtgaacgacaaaatgcatttctacctaaccgaataa
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