Trematomus bernacchii (emerald rockcod): 117493048
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Entry
117493048 CDS
T09643
Symbol
recql5
Name
(RefSeq) ATP-dependent DNA helicase Q5
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tben03400
]
117493048 (recql5)
Enzymes [BR:
tben01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
117493048 (recql5)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
117493048 (recql5)
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RecQ5
TFIIS_M
EloA-BP1
ResIII
SRI
Motif
Other DBs
NCBI-GeneID:
117493048
NCBI-ProteinID:
XP_033999322
EnsemblRapid:
ENSTBNG00005009028
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MTTTIKQALKTHFGFNNFRSKIQEDVVKAVVKGDKDVFVCMPTGAGKSLCYQLPAILAPG
ITLVISPLIALIQDQVDHLQSLNIPACSINSKLPAGERQLIYADLGSSSPKLKLLYITPE
MVASPSFKPCLTDLCTRGLLSYLAVDEAHCVSQWGHDFRPDYLKLGKLRARMPGVPCLAL
TATAPKNVQEDIVLSLTLRTPLSFVTPVFRSNLHYDVIFSELLPNPLVHLHAFIQQSLAL
DSGSKGQGCGIVYCRTRDSCESVAHQLTKLGVSAKPYHAGLKTGDRTESQNEWMQGKVLV
IVATISFGMGVDKANVRFVAHWNLAKSLASYYQESGRAGRDGLPSSCRIYYSPKDKEQLN
FLIRKEISRKRGKRGTAKETDKATITDFDAMVAYCVQEACRHTTISKFFGNKAPKCAGAC
DFCRNPKLVRAQLEKGSSLSTKTMALSSQPSGPFGYLQGFYEGGKKGYGFERFDEGEEDA
ESGEDDGSTRKKAFSNLYKTQMTMRKGMTVQRKGFVPPDDDCQLRDASSQKIPRLTVKAR
EHCLSLLQEALYSHQRADDAFSDTVSLAVAIEHEVFENSKASNVYKAAVLKRVSEMKRTG
PGGKGDEVKADSNSDSTENSSSTSLTEELQGFTSASEIYSMKRKRVGAGLRGSSDPLMTA
KELLKTSASNSDSGGFHSDTSGGSRKTNKDPSLAVTSSIRAKASLSSPTKGGRAASKKRQ
QKLAEAAKSSCNISQYFAKKVPDDATISHNTVEDDQEIDRPLVIVEEMEISSGEERKEEE
VILISDNDEEEKTIKKKMLEVKWFQYIPTEDTTTPAGQKETQEKDEPVLIEEVTSQKASS
PPAKSCDPSERGQKETQEEDEPVLKEEVTGEVTSQKASSPPAKSCDPSERGQKETQEKEE
PALTEEEADEVTAQKAPSPPAKRSRPSENRVTFNPNVQECPLIANERPPAVTLKEAADIV
VRYLDPFYSKGKFATKELFKSFARFLSHLLTEGSSKEKDQVKAEAKTLINKFFIKVHHCK
SEADWTHLRARL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaactataaaacaagccttaaaaactcactttgggtttaacaactttcggtct
aaaatacaggaggatgttgttaaagcagtcgtcaaaggtgataaggatgtgtttgtgtgc
atgcccacgggagcagggaagtcgctctgctaccagctacccgcgatcctggctccgggt
atcactctggttatatccccgctaatcgctctcattcaggaccaagtggaccacctgcag
agtctgaacatccccgcctgctccatcaactccaagctcccagcaggcgagcgccagctg
atctatgctgatttagggagcagcagtcctaagctcaagctgctttacatcactccggag
atggttgcttctccttcgttcaagccctgcctgacggacctgtgcacccgtggcctgctg
tcttacctggctgtggacgaggctcactgcgtctcccagtggggacacgacttcaggccg
gactacctcaaactggggaaactgcgtgctcgaatgccgggggttccctgtttggccctg
acagctacagcacccaagaatgtacaagaggatattgttttgtccctgactctgcgcacg
ccgctgtctttcgttacacctgtcttccgcagtaacttgcactacgatgtgatcttcagt
gagctgctgccaaaccccttggtccacctccacgccttcattcagcaatctctggccctg
gacagcggctctaaaggacagggctgtgggattgtgtactgtcggaccagggatagctgt
gaatcggtggctcaccagctgaccaagctcggagtctcggccaaaccttatcatgcaggt
ctgaagacaggagatcgcacagagtcccagaatgagtggatgcaagggaaggtgctggtt
atcgtagccaccatcagctttggtatgggcgtggacaaggccaatgtcaggtttgtggct
cactggaaccttgcaaagtccctggccagctactaccaagagtcaggaagagctgggaga
gacggcctgccctcctcctgtcgcatatactactcccccaaagataaggagcaactgaac
ttcctcatccgcaaagagatttccagaaaacgggggaaacgcggcactgcgaaggagact
gacaaagcaaccatcacagactttgatgccatggtggcgtactgtgttcaggaagcttgt
cgccataccaccatctccaagttctttgggaacaaggcgcccaaatgtgccggtgcctgc
gacttctgccgtaaccccaagctggtgcgagcccagctggagaaagggagctccctcagc
accaagaccatggcccttagcagccagccctcaggacccttcggctacctgcagggcttc
tacgaaggagggaagaagggctacggctttgaaaggtttgatgaaggggaagaggacgcg
gagagcggtgaagacgatggctcaacgaggaaaaaggcattttctaacctctacaagacg
cagatgaccatgcggaagggaatgaccgttcagcggaaaggctttgtccctccagatgat
gactgccaactgagagacgccagcagtcagaagatccccagactcactgtaaaggccaga
gagcattgtttgagcctcttgcaggaagcattatacagccaccagagggcagatgacgca
ttcagtgacactgtgtctttagcggtggcaattgaacatgaggtctttgagaacagcaag
gcctccaacgtgtacaaagctgccgtcttgaagagggtatcagagatgaagaggacagga
cctggaggaaaaggagatgaggtcaaggcggacagcaacagtgattctacggaaaattcg
tcttctacttccttaacagaggagctgcaggggttcacatctgcatctgaaatatactca
atgaagcgtaagagagtaggagcgggcctgaggggatcgtccgaccccctcatgactgct
aaggaactcctgaagacctcggcgtctaacagtgacagcggcgggtttcacagcgacacc
tcaggaggatccagaaagacaaacaaagacccgtctctggccgtaacgtcgtccatcaga
gccaaagcctcgctgagcagccccaccaagggaggaagagctgcgagcaagaagcggcag
cagaagctagcagaggcagcaaagagctcctgcaacatctcccagtactttgcaaagaaa
gtacctgatgatgctacgatatctcataacacggtggaggacgatcaggaaatcgatcga
ccacttgtcattgtggaagaaatggagataagttctggagaggagaggaaagaagaagaa
gtaatattaatatctgataatgatgaagaggagaaaaccattaaaaaaaagatgctggag
gtgaagtggtttcagtacatacccacagaggataccaccactcctgcaggacagaaggaa
actcaggaaaaggatgaacctgttctgatagaagaggtgacgtcgcaaaaagcatcctct
cctccggcgaagagctgtgacccctcagagagaggacagaaggaaactcaggaagaggat
gaacctgttctgaaagaagaggtgacgggtgaggtgacgtcgcaaaaagcgtcctctcct
ccggcgaagagctgtgacccctcagagagaggacaaaaggaaacgcaggaaaaggaggaa
cctgctctgacagaggaggaggcagatgaggtgacggcgcaaaaagcgccctctcctccg
gcgaagcgcagtcgcccctcagagaatagagtgacctttaaccccaacgtgcaggagtgc
cctctgatcgccaacgagcgccccccagcggtgacgctgaaggaggcggcggacatcgtg
gtccggtacctcgacccgttttactctaaggggaagtttgccaccaaggagctgtttaag
tcctttgcacgctttttatctcacctcctcacagaggggagtagtaaagagaaagaccaa
gttaaagccgaagccaaaactctcatcaataagttcttcatcaaagtgcaccactgtaag
agcgaggcggactggacgcacctgagggcgcggctgtaa
DBGET
integrated database retrieval system
