Trematomus bernacchii (emerald rockcod): 117493065
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Entry
117493065 CDS
T09643
Symbol
si:dkey-119f1.1
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tben03400
]
117493065 (si:dkey-119f1.1)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
117493065 (si:dkey-119f1.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
Laminin_II
AAA_29
SMC_hinge
TMF_DNA_bd
FlgM
AAA_21
ATG16
Crescentin
Motif
Other DBs
NCBI-GeneID:
117493065
NCBI-ProteinID:
XP_033999345
LinkDB
All DBs
Position
Unknown
AA seq
1088 aa
AA seq
DB search
MPKRKSSSAIGGPPKRVTAEEKDVEDERDSDPEDHPQNRQVQGVREVASDAGIVESITLK
NFMCHSHLGPFTFGSNVNFVVGNNGSGKSAVLTALIVTLGGNAHATNRGLSLKGFVKEGE
SSADVSITLRNKGRDAFKSEVYGSAITVDLRITREGLRSYKLRSKSGQIVSTKKEELLSI
LDNFNIQVNNPVSVLTQEMSKHFLHSKGEGDKYKFFMKSTQLDQMKEDFVHIKTTKHITE
EKIEQHGQYMKDLKQKYLEKEDRFKNLSSLDEMETKLEELQKQMAWVLVHDMENELKPLK
EKLQSDRHSTEKYDAKVEEWKNKVEEAEGKYRQIEERLEGITQQVQELQPESAQLKSEAR
EKNAVLNSREVTVHRCRAHLRDLEKDKVQLSSRIKDLKLSITQTSGAESQARTERVEQLQ
AELENMSHQTSTLEQQIDQYRQACSRATEEQGKMKREQDVFQRSIDANRRNLQNMESSRS
NRLRRFGEHMPALLTAIDEAGRNGQLRQKPRGPLGHLIRLKDPDLALAVEVCLKGQLQAF
TCDNHDDEKVLQGLMSRVCPNARRPAIITSHFLPRVHDTRSRAVNHPEYPSVLHSLEIED
PVVANCLIDQRGIESILLIKNQTDARRVMQGGAPPRNCSQAFSKDGDQVFNNRSYSAEQT
RANYLSGDVEEEIRHLQKELENQKAQATRFQQQMRKLDDDVKQNDGLLRRAQVEERTIKN
KAAKIQLELSELQNVEEPQSEDLNPLEEELQEIVSKISSKRAEYDEAQAQMADCKAAYEK
AEQEYKQHKEQIFTAAEDAEHVKEELSKTDQDVGKCKHHKKHYDEKRTVHLRSIQALEGN
LESKEQELQTSVAKATKISAERVEVRRTAKSLDNEISRLKVKISTQQEQQGNRDEVVRQY
HEALQNYKNMALQMKNLNGFIKCLDSVMKQRLQVYSELRRFLSARCKYYFNSTLAQRGYT
GSMTFNHKSETLSISVQPGQGSSVELSDMRSLSGGERSFSTVCFVLSLWAITEAPFRCLD
EFDVFMDMVNRRISMDMMLKVASGQRYRQFIFLTPQSMSSLPQSKNIRILRLKDPDRGIN
EQSSQDDE
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaggaaaagcagctcagcaattggggggcctccaaagcgggtcactgcggag
gagaaagacgtggaagatgagcgtgacagtgacccggaagatcatccacagaatagacag
gtgcagggtgtgagagaggtggcaagtgatgcagggattgtggagagcatcacactgaag
aacttcatgtgccactctcacctcggcccattcacttttggttcaaatgtgaactttgtt
gttggcaacaatggaagtggaaagagtgccgttctgacagctctcatagttaccctaggc
ggtaatgcacatgccaccaacagaggattgtccctcaaaggatttgtaaaggaaggagaa
agttcggctgatgtttcgatcaccctgcgaaacaaaggaagggacgccttcaaatctgag
gtgtacggctcagctatcacagtagacctgcgaataacacgcgaggggttgagaagctat
aaactgaggagcaaatctggtcaaattgtctcaaccaaaaaggaagagttgctgtctatc
ctggacaatttcaacatacaggtcaacaaccctgtctctgttctcactcaagagatgagc
aaacacttcctacattccaaaggggaaggggacaagtataagtttttcatgaaatctacc
caattggaccagatgaaagaggactttgtgcacatcaaaaccaccaagcatatcacagaa
gaaaaaattgagcaacatggtcaatacatgaaagacttgaagcagaagtacctggagaaa
gaggaccgtttcaagaacctgtcatcattggatgaaatggagaccaaactagaggagttg
cagaaacaaatggcttgggttttggtgcacgatatggagaacgagttgaagccattgaag
gagaagctgcaatcagacagacattctacggagaaatacgatgcgaaggtggaagaatgg
aagaataaggtcgaagaggctgaggggaaatacagacagatcgaggaaaggttggaggga
atcacacaacaagtccaggagctccagcccgaatctgctcagctcaagtctgaggcccgg
gaaaaaaatgccgtgctcaactctagggaggtcactgttcacagatgcagggctcactta
agggacctggaaaaggacaaagttcagctgtcctcaagaataaaggatctcaagctgagc
attactcagacatcaggagcagagagccaggccagaacggagcgtgtggagcagcttcag
gccgagctggaaaacatgagccaccagacctccactctcgaacagcagatcgaccagtat
cggcaggcatgcagccgcgccacagaggagcaagggaaaatgaagagagagcaagatgtg
tttcagaggtccattgacgccaacagaaggaacctgcagaacatggagagcagtcgctcc
aatcgcctgcggcgttttggagagcacatgcccgcactcttgaccgccatcgatgaggct
ggcagaaatggacagctcaggcaaaaacccagaggacctctgggtcaccttatccgcctg
aaagacccggatttggctctggctgtggaagtgtgtctgaaaggccagctgcaggccttc
acatgtgataaccacgacgacgagaaggtgctgcaaggcctcatgtccagagtttgccca
aatgcccgtagacctgccatcatcaccagccatttcctcccacgtgtccatgacacaaga
tcaagggccgtgaatcaccccgagtacccgtccgtgcttcactctctagaaattgaggac
ccagtcgttgccaactgtctgattgatcaacggggcatagagagcatcctgctcattaag
aatcaaacagacgctcggcgagtgatgcagggcggagcccctcctcggaactgttcccag
gccttttcaaaggacggagatcaggtcttcaataaccgcagttactctgctgagcagacc
agagccaactacctctctggagatgtagaggaggagatcaggcacttgcagaaggagttg
gagaaccagaaagctcaggcaacacgtttccagcagcagatgaggaagttggatgacgac
gtcaaacagaacgatgggctgctgagaagggctcaagtggaggagaggactatcaaaaac
aaggctgcaaagatccagctggagctgtcggagctacagaatgtggaagagcctcagtca
gaggacctcaatcccctggaagaagagcttcaagagatcgtatctaagatctcgtcaaag
cgtgcagagtacgacgaggcacaggctcagatggctgattgcaaggcggcctatgagaag
gcagagcaggagtacaagcagcacaaagagcagatcttcacggccgcagaggatgccgag
catgtcaaggaggagctgagtaagaccgatcaggacgtgggcaagtgcaagcatcacaag
aaacactacgacgagaaacgcactgtacatctccgcagcatacaggcgctcgaaggcaac
ctagagagcaaggagcaggaactacagacatctgtggccaaagccaccaaaatctctgcg
gagcgagtggaggtacgaaggacagccaagagtctggacaacgagatcagccgtctcaaa
gtgaagatcagcacccagcaggagcagcaggggaaccgtgacgaggtagtgaggcagtat
catgaggctctgcagaactacaagaacatggcactgcaaatgaaaaacctaaacggcttc
atcaaatgtctcgatagtgtcatgaaacagagactccaggtgtactctgagctcaggagg
ttcctctcggcccgttgtaaatattactttaacagcacactggcccagagaggctacact
ggaagtatgacctttaatcacaagagtgaaaccctctccatctcagtgcagccaggccag
ggaagcagtgtggagttgagtgacatgcgctctctgtccggaggcgagcgctccttctcc
accgtgtgctttgtgctctccctttgggccatcacagaggcgcctttccgctgtcttgac
gagtttgatgttttcatggacatggtgaacaggaggatctcaatggacatgatgctaaag
gtggcttccggtcagcgctacagacagttcatcttcctcacaccacagagcatgagctct
cttccacagagcaaaaatatccgcatcctccgtctcaaagacccagatcgtggcataaat
gaacaaagcagtcaagacgacgagtag
DBGET
integrated database retrieval system
