Trematomus bernacchii (emerald rockcod): 117493234
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Entry
117493234 CDS
T09643
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03410
Base excision repair
tben04210
Apoptosis
tben04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117493234 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117493234 (parp1)
04217 Necroptosis
117493234 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tben03032
]
117493234 (parp1)
03036 Chromosome and associated proteins [BR:
tben03036
]
117493234 (parp1)
03400 DNA repair and recombination proteins [BR:
tben03400
]
117493234 (parp1)
Enzymes [BR:
tben01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
117493234 (parp1)
DNA replication proteins [BR:
tben03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
117493234 (parp1)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
117493234 (parp1)
DNA repair and recombination proteins [BR:
tben03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
117493234 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
117493234
NCBI-ProteinID:
XP_033999579
LinkDB
All DBs
Position
Unknown
AA seq
1016 aa
AA seq
DB search
MAESQEDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RAAAQSTADIAGYSDLRWDDQEKVKKAIESGGAVGGKGDQKGGAKGEKTLNDFAVEYAKS
NRSTCKGCDLKIEKDQIRVSKKTVDPEKPQLGLIDRWYHTACFVSNREELAFKPEYSAAQ
LKGFNALRAEDKEELKKRLPAVKTEGKRKGDEVDGVTKKQKKEEDDEKKKLEELLKNQSQ
LIWGIKDKLRKFCSTNDMKELLIANSQEVPSGESNVLDCLADGMAFGALEPCKECTGQLV
FKGDAYYCHGDISAWTKCVFKTTTPIRDNWITPKEFHEIPFLKKFKFKLQDRVYPKEAPA
ETPSAAKAKPLASASGVKTEQLPEGAPADKPLTGMKLMSVGKLSKNKDDLKAFVEELGGK
IASSANKASLCLSTKKEVEKMSKKMEEVRDAGVRVVSEDFLKDIKSSGKALQELVSLHAI
SPWGAEVKAEAPAPAPSVASKSGTPAAKSTGRVKEEEGSSKTKKMKLTVKGGAAVDPDSG
LENSAHVLEQSGKMYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIGG
NKLDKFHDKNSATDNFLGVYKEKTGNTWSTSNFTKYPNRFYPLEIDYGQDEEAVKKLTAS
AGTKSKLAKPIQELIKMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSLLTDVQQ
AVTESLSEAHILDLSNRFYTLIPHDFGMKKPPLLNSLDYIQNKVQMLDNLLDIEVAYSLL
RGGAQDDESDPIDINYEKLKTKIEVVDKSTTEAEIITQYVKNTHAATHNTYTLEVEEIFK
IVREGERQRYRPFEELSNRQLLWHGSRKTNYAGIMSQGLRIAPPEAPVTGYMFGKGVYFA
DMVSKSANYCHTSQSDPVGLLLLAEVALGNMHELKKASHITKVPKGKHSVKGVGRTAPDP
SASVTLDGVQVPLGKGSNTNIDDTSLLYNEYIVYDVSQVNMKYLLKIKFNYQTSLW
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtctcaagaggacaagctgtacaaggcggaatatgccaaaagcggccgtgca
tcgtgcaagaaatgcaaagaaaacatagcgaaagactcgctgagaatggccatcatggtg
cagtcacccatgtttgatgggaaagttccccactggcaccacttctcttgcttctggctg
agagctgcagctcagtccacggctgatatagcgggctactctgacctgcgctgggacgac
caggagaaagtaaagaaggccattgagagtggaggagcagtaggaggaaaaggagaccag
aagggtggagccaaaggagagaagacactaaatgactttgcagtagaatatgccaaatca
aaccgcagcacatgcaaaggctgtgatctgaaaatagaaaaggatcagatccgtgtctcc
aaaaaaactgtggacccagagaagccccagctgggtctgatcgaccgctggtaccacact
gcgtgtttcgtgagcaacagggaggagttggccttcaaacctgaatacagcgccgctcag
ctcaaaggtttcaacgcactgagggcagaagataaggaggaacttaagaagaggcttcct
gctgtaaaaactgaaggtaagcgtaagggcgatgaagtggatggagtaacaaagaaacag
aagaaggaagaagacgatgagaaaaagaagctcgaggagctgttaaagaaccaaagccag
ctgatttggggaatcaaggacaagctgaggaagttctgctccaccaacgatatgaaggag
ctgctgattgcaaacagccaggaggttccctcaggagaatctaatgtgctggactgcctc
gcagacggcatggctttcggggcccttgagccctgtaaggagtgcacgggccagctggtg
ttcaagggtgatgcttattactgtcatggggacatctcagcctggacaaagtgtgtgttc
aaaacgacgactcccattcgcgataactggatcacccccaaggaattccatgaaattccc
ttcctgaaaaaattcaagttcaagctacaggacagggtttacccaaaggaggctcctgcc
gaaactcccagcgcagccaaagctaaaccgctggcgagtgcatccggcgtcaagacggag
caactgccagagggagcgcctgcagacaaacctctcactggtatgaaactgatgagtgtg
ggcaagctgagcaagaacaaggacgatctcaaggcttttgtcgaggagctcggtggaaag
attgccagctcggcaaataaagcttctctctgcctcagcaccaaaaaggaggtagagaag
atgagtaagaagatggaggaggtgagggacgctggcgtgcgcgtggtctccgaggatttc
ctcaaagacatcaagtcgtcgggtaaagccctccaggaactcgtctccctgcacgccatc
tcaccctggggcgccgaggtcaaagctgaggctccagctccagctccgtcagtggcctcc
aagtctggaacgccggctgccaagagcacaggcagggtaaaggaggaggaaggcagtagc
aaaaccaagaagatgaaactgacggtgaaaggaggagctgctgtggatccagattcaggg
ctggagaacagcgctcatgtcctggagcagagcgggaaaatgtacagtgctacgctgggt
cttgtggacattgtcagaggaacaaactcctactacaaattgcagctgctagaggatgat
gtacagaaacgatactgggtgttcaggtcatggggcagagtgggtaccactatcggaggc
aacaagctagacaagtttcacgacaaaaactctgccacggacaacttcctgggtgtctac
aaagagaagacgggcaacacatggagcacctccaacttcaccaaatatcccaataggttc
tacccactggagattgactatggacaggatgaagaagcggtgaagaagctgacagccagc
gccggcaccaagtccaagctggccaaacccatccaggagctgatcaagatgatctttgat
gtagagagcatgaagaaggccatggtggagtttgagattgacctccaaaaaatgccccta
ggaaaactgagtaagaggcagatccagagtgcctattccctcctcactgatgtacagcag
gctgtgacagaaagtttgtctgaggcccacatcctggatctctccaatcgcttctacacc
ctgatacctcacgacttcgggatgaagaaacccccgctgctcaacagcctggactacatt
caaaataaagttcagatgttggacaacctgttggacattgaagtggcatacagcctgctg
agagggggggcccaggacgatgagagcgatcccatcgacatcaactacgagaaactcaaa
accaagattgaggttgttgacaagtctacaactgaggctgagatcattacgcaatatgtt
aagaacacccacgctgctacacacaacacttacacgctggaagtggaagagatctttaaa
atagttcgagagggagagcgccagcggtaccgtcccttcgaggagctaagcaatcgccag
ctgctgtggcacggttctcgcaaaaccaactacgctggtatcatgtctcagggtcttcgc
attgcccctccagaggctccagtgactggttacatgttcggtaaaggtgtgtactttgcc
gacatggtgtccaagagtgcaaactactgtcacacctcccagtcagaccccgtcggtctc
ctactgctggctgaggttgctctgggcaacatgcatgaattgaagaaggcgtcccacatt
acaaaagtacccaagggcaagcacagtgttaaaggtgtgggtagaactgctcctgatcca
agtgcatctgtcactttggacggggtgcaagtacctctgggaaaaggaagcaacacgaac
attgatgacacaagtctcctgtacaacgaatacattgtgtatgatgtgtcacaggtcaac
atgaagtatctcctgaagatcaagtttaactaccagacgtccctgtggtga
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integrated database retrieval system
