Trematomus bernacchii (emerald rockcod): 117493351
Help
Entry
117493351 CDS
T09643
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
Organism
tben
Trematomus bernacchii (emerald rockcod)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC_2
zf-RING_5
zf-CCHC
zf-RING_2
zf-C3HC4_4
N4_RNAP_helical
zf-C3HC4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
117493351
NCBI-ProteinID:
XP_033999754
LinkDB
All DBs
Position
Unknown
AA seq
1631 aa
AA seq
DB search
MTHVHYKFSSKLSYDTVVFDGLHVTLRDLKRQIMGREKLRAGDCDLQITNAQNKEEFTDD
DGSIPKGSSVIVRRIPIVGGKPNSSKTRNLERSDILTNNAFGAFKAMDDLNSSRALPLFS
KMANLADVEGSEEDKIRVMMNQTGYDPTNYSKKPGTVLPANYTCYRCGGSGHHIRNCPST
ADKNQEAPVKIKKSSGIPRSFMMEVDDPSVKGAMLTSCGRYAVPTIDAEAYAIGKKERPP
FVPRDHSESEDEEDPVPEELLCLICHDLLSDAVVIPCCGNSYCDDCIRSALLDSEDHVCP
TCSQSDVSPDNLIANKFLRQAVDTFKKERGFTKSLKKGCSASQSQNPTPTLSPALTPPPL
TVQIQPQKPLLLNHRQQDPLRQHSQAADTPPSSQVPTSPVSTPNTPSTSCQPVQSHLETS
EKEAEEKTDDDSAAAVALSAPVSSEELTDAPSQLIPLVNLTPEAELPQTSRVNQQQPSSD
PPPRPSGPPTCWESSSSSSGCPPGGWTELNTQQRPPSSSPYPATPPPLFPPPHFHTFLTA
PPPLSPYPPGYPPAIWTLPNLPGAPIAPLCPSTSIPALIPKEWYMQRKKERSPHRGSSHR
RPSSGSHSKSSKSKSARSYSRSSSRSRSRSRSQGRSRPHSPYSHHREPHPRSTSSRSYCY
GYKRSPTPSSSSSPQVGYHSRSRSPSDHSRNSRHQSRTSVSGSYDSGRRGEHHPREAGSH
MYDPHVNQSSGMDQERFLQWKREYKEWCDKYFSSYVGHFHQMPIPLLSLPHPPQWGDREG
SKNYSHANSDSRNRVQGRRSARMDKRSPQSSSDSRSPPSQSSRDSRSTPSQTSSDNRSSP
SHSSNNSRSPHSQSSSDGRSTPSEDRALLKTYERRRTEKNSRRPITPPKSSEEPQEKRKD
EKRILNRNLVKHEQKTVKKLKEEGVEKSSSPDSTDDRKGKRGHKTGPNPFKDGSQGPERA
TANNALEPVQKLVKPAKRLDKDYERKGREQRSLDKGKERRRGEHSDSRRDARRSHQDKPS
KESGRVDRDRYRDPEGKRASGLENMKRKRENTERDSVKAQSSKCRKDPETRSSESPITFE
RNKTEKKKERKTWPLAEKDIWEGGIQMKPQKKISININLEGKKSESENLHYLESVTGKIK
RDFQAGDGEEERLNRGETHIEENKETSRDMEEVSEDKRQKWEKATFRDDEGELFEKKQET
EKENFDLWHSFCREVEEEKESEKHPDERDMMEASKGEEVTNEEMKLVASTSKEIVEGEST
SKENIENLPAESKSKDELMELLNWRIMEEQEQEQDMIMSNSQSSKYKSHHDRLNTMVDDD
SSCEDHQAMKTVLKTLEELSQDIAGNQEDELVLTQVPHSKWEKEDSEEYQLGKGAIKVQN
DAPEMYLPSPSVSVTTETSVEIDRRTEKDQTPILSSSQRRVAPSSGKDRTDRDEEKRMER
RRDRERGRESDKSRDRQKDRNISKERRREGEKERDRERERSHKSNPPSSSYSTSHDMERR
DKLSKKAPVLPDQNVHKTFIDTLLDSSFKENPHFYNNHPEKGGRGLEEMERPSSNSTSSS
ASQENGRGDARKEKKKQKKHKKEKREASPELCEEEGLKRQKKKTSKQSRDGEEEEISGDV
DETMLMLSLLS
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atgactcatgttcattataaattctcctccaaactcagctacgacacggtggtttttgac
ggcctgcatgtcacgctgagggacctgaagaggcagatcatgggcagggagaagctccga
gccggggactgcgacctgcagatcaccaacgcacagaataaagaagagttcacagatgac
gatggttcgatccccaaaggctcctccgtcatcgtcaggagaatccccatcgtcggagga
aagccaaactcaagcaagacccgcaaccttgagcgatctgacatcctgactaacaacgcc
tttggagccttcaaagcaatggatgacctaaattcttccagagccttaccccttttctcc
aagatggctaacctggctgatgtggaagggtcagaggaggataagatcagagttatgatg
aatcagacgggctatgaccccacgaattacagcaagaagcctggtactgtgcttcctgcg
aactacacctgttatcgctgtggaggaagtggacaccacatcaggaattgtccaagcaca
gcggataaaaaccaggaagcccctgtgaaaataaagaaaagttcaggcatccctcgctcc
ttcatgatggaagtggacgatccctccgtaaagggagccatgctgaccagctgtggacgt
tacgcggttcctacaatagacgctgaggcgtacgccatcgggaagaaggagagacctccg
ttcgtcccccgggatcattcggagtcagaggacgaggaggatcctgtccccgaggagctg
ctctgtctcatctgtcatgacctgctgagcgacgctgtggtcataccctgctgcggaaac
agctactgcgacgactgtattcggagcgccttgctggactcagaggatcacgtctgcccc
acttgtagccaatcagatgtctcacctgataacctgatagccaataaatttctccgacag
gctgtggacacttttaagaaagagcgaggcttcactaaaagtctgaagaaaggatgcagt
gcctcccaatcccaaaatccaaccccgaccctgagtcctgccctcaccccgccccctctc
accgtgcagatccagcctcagaagcctctcctcttaaaccacagacagcaggaccctctc
cgccaacactcacaggctgcagacacaccgccatcctctcaggtgccaacaagccccgtc
tctacccccaacacgccaagcacttcctgccagcctgtgcaaagccacctggagacatct
gagaaggaggctgaagaaaagacagacgatgactcagcagctgctgtcgccctgtctgca
ccggtttcatctgaagagctcactgatgctccgtcacagctgatcccactggttaacctt
actccagaggcagagctgccgcagacaagccgtgtgaatcaacagcagccctcctcagat
ccaccaccaagaccctctgggccaccaacgtgctgggagagctcctcttcctcctcaggt
tgtcccccaggaggctggactgagctgaacacccagcagcgtcctccttcctcctctcca
tatccagcgactcctccccctctcttccccccccctcatttccacaccttcctcacagct
cctccacctctcagcccttaccctcctggatacccacctgccatctggacgctcccaaac
ctcccgggtgcccccatcgctcccctgtgcccctccacctccatccctgcgctcatcccc
aaggagtggtacatgcagagaaagaaggagaggtcacctcacagaggatcttcccacaga
cgcccctcctctggttctcattcaaagtcttctaagtccaagtctgctcgctcctactcg
cgctcttcaagcaggtccagatcccggtccaggtcccaagggagatcaaggccccactca
ccttactcccaccacagggaaccccacccccgctctacttcctcccgctcctattgctat
ggttacaaacgttccccaactccgtcttcgtcctcttcacctcaagtgggttaccattcc
aggtccaggtcgccttcagatcatagcagaaacagtcgccaccaaagtaggacatctgtg
tctggcagctacgactccgggaggcgaggagagcatcacccgagggaagcaggaagtcac
atgtacgatccgcacgtaaatcaaagtagcggcatggaccaagagcgcttcctgcagtgg
aaaagggagtacaaagagtggtgtgataaatattttagcagttatgttggacacttccac
cagatgcctattcccctcctcagtctcccccatcctcctcagtggggggacagagaaggg
agcaaaaattactcgcacgctaactcggattctcgcaacagagtccaaggtagacgcagc
gcccggatggacaaacgctctcctcagtcatccagtgacagccgctcccctccatctcag
tcttcacgtgacagccgttcaacgccgtcccagacatccagcgacaaccgctcgtctccg
tctcattcgtctaacaacagccgctccccgcactctcagtcgtccagcgacgggcgctcc
acaccatccgaagacagagctctgttgaagacgtatgaacgaaggcgaactgagaagaac
agccgccggccaatcacacctccaaaaagcagcgaggaaccgcaagaaaagagaaaagat
gaaaagcggatactcaataggaatttggtcaaacacgagcaaaagactgtgaagaaactt
aaggaggaaggagtagaaaagtcatcctctcctgactcaacagatgacagaaagggaaaa
aggggccacaaaactggaccaaacccctttaaagatggcagccaaggaccagagagagca
acagccaacaatgccttagaaccagtccaaaagctcgtgaaaccagctaaacgtttggat
aaagactatgaaagaaaaggcagggaacaaaggagtttggacaaagggaaagaaagaaga
agaggcgaacattcagactccaggagagatgcacggagaagtcaccaagacaagcccagc
aaagagtcaggcagggtggatagagacagatacagagaccctgaaggtaaaagagcttca
gggttggagaatatgaaaagaaaacgagaaaacacggagagagattctgtaaaagctcaa
agcagcaaatgccggaaagaccctgaaactcgcagcagtgaatccccaattacatttgag
agaaataagacggagaagaaaaaggagaggaaaacctggcctctggcagagaaagacatc
tgggagggaggcattcagatgaaaccacagaagaagattagcatcaacataaacctggaa
ggtaaaaagtctgaatctgaaaatctgcactatttagagagcgtcacagggaaaataaag
agagattttcaggctggtgatggagaagaggagaggctaaacagaggagagacacacatt
gaagaaaataaggaaaccagcagagacatggaagaggtgtctgaagacaaaagacagaaa
tgggagaaagctaccttcagagatgatgaaggagagttgttcgagaagaaacaggagaca
gaaaaggagaattttgacttgtggcatagtttctgcagagaagtggaggaggagaaggag
agtgaaaaacatccagatgaaagagacatgatggaggccagcaaaggagaagaggtgaca
aacgaggagatgaagttagtcgcaagtacaagtaaggagatagttgagggggaaagcaca
tccaaggaaaacatagaaaacctgccggcggagtcaaagtcaaaggacgagctgatggag
ctactgaattggaggataatggaagaacaagaacaagaacaggatatgataatgtccaat
tcacagagcagcaaatacaagagccaccatgacagactgaacaccatggtggacgatgac
agcagctgcgaggatcatcaagcgatgaagacagtgttgaaaactctggaggaattatcc
caggacatcgctggaaaccaagaggacgagctcgtactcacacaggtccctcactccaaa
tgggagaaggaagactctgaggaatatcagctaggaaaaggagcaattaaggttcaaaat
gatgctcctgaaatgtatctgccttcaccctcagtgtctgtcacaacagagacatcagtg
gaaattgatagaagaaccgagaaagatcaaacccccattttgtcgagttcacagagaagg
gtggctccctctagtggcaaagacagaactgacagagacgaggagaaaaggatggagaga
cggagggacagagagagagggagggagagcgacaaatcaagggataggcagaaagacaga
aacatatcaaaagagaggagaagggagggggagaaagaaagagacagggagagagagagg
agtcataagagtaaccccccttcctcctcttattcaacgtcacatgacatggagaggaga
gacaaactcagcaagaaagctcctgtactgcctgatcaaaatgtccacaagacgtttata
gacacattactggactcatcatttaaagagaatccccacttctacaacaatcacccagaa
aagggaggaagagggctggaggaaatggagaggcccagcagcaacagcaccagctcatcc
gcaagccaggagaatggcaggggcgatgcgaggaaagagaagaagaaacaaaagaagcac
aaaaaggagaaaagagaagccagcccagagctgtgtgaagaagaagggctgaagagacag
aagaaaaagacttcaaagcaaagcagagatggagaggaagaggagatcagcggagacgtg
gacgaaactatgcttatgttgtctttactgtcataa
DBGET
integrated database retrieval system
