Trematomus bernacchii (emerald rockcod): 117493382
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Entry
117493382 CDS
T09643
Name
(RefSeq) LOW QUALITY PROTEIN: retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117493382
Transcription factors [BR:
tben03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
117493382
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
117493382
NCBI-ProteinID:
XP_033999800
LinkDB
All DBs
Position
Unknown
AA seq
2363 aa
AA seq
DB search
MRGLGGAERYKLKRDERGGRGGGGKQTDTERVGKRRRCEEEEEEEEEGGAGSGRTRVQAW
RLWHASQVGMDSITHSQAWAWGPRTPNPPSPPFPSHLTSPSQLWLQTQRVMQSFRERSGG
YHSNQPCYQQEPHELSRLETYRQHPHHPHPQHPHPGPGPHPGPGPHPGPGSHPGPGPHPG
PGPHPGPGPHPGPGPGHTRSGYEAHPLANPTTMPPAGGPGTAGVPKDCYSQQAYPGYPGN
GGGNGSGNGIPASSQAKKSYRGTKVPPPNPGQHLQGPGGYSNHMGPGSYSAQYMSEGHLQ
QKWEDSAQLAQYDPEMVGRMEAGGTPAPVSSQYMDQNMLGHSQTQCHQPSTPAYTSPHHQ
PHPTNPSPSPLMYPQSHLHYPQHSPSPSPYMEKCSPMPQCYKGYNIPPNSQYGRQMSSHS
NLKPGAYRSTQNSYGYQQTPSRGYEQQPPLQAMPNPQEPHPKYQHYSQPQQNYCLSELSV
RSPEQYYQTCSPSSSHSPARSVGRSPSYSSTPSPLMINPESFQYGQPPMTPGAASSASSS
SAGIQEQTNTNTMLMPPRSHPSPNVPHAAPHSYTTTPQVPTMKERFSEKLLSNPSLWSLN
ALTSQVENISNNVQQLLLSEAMVANKKSGKRSSGGSNSSAGTGASAKKGEEYKSPAYPDG
GGGSIGGGAMQDPYSTPQHQPMPMELQEGGYSSSSDEQLERGYYYCGQGRSPAQAPNNTQ
LSLDTASSCSMTSPDDMSTRSGDSGLHNLTPDPNRCQSSQGGDGMSTPVKSIGDERSPTS
FTIPSPMKQERDSPSDIQHINEPVKENFEESAWTEKTSEKEEVSTQNTPDHERDSDTTKS
TEHLEKWSDEEKCPALYSKVNEEETETKYCYKETVYQEAQSKYDPDTRDSVEQSPAALSD
TSHKEHFGHEMKSEAFKSESPTASESSVKTLPFISRGDLEQDQYSTEKEDSSENPSPSPQ
VEALDESNSDKRERRDDEDEEEMEEEGGGQEEANEEQEEEIQKQQPSXSPPLSVEAREEL
GEGEKVSSTEEHMNNRDGQEKPPGDFCSRTESESTELQTDNEPSGAPAHPNAAAATADAS
ARESAIGDTAPQPQSAMPVFSALNDKTTPSAQTRDHIDHIDTKVLEPDSPQLPGKSILPS
APSWADTPPSPKKGDEDMEPGISCASAVTPLAKPEPVAPSAQPRAFGRKHARGRRRIMHS
GVGIRRQLGLEREGEKEEEGASSPTQKPCVSLSKTELFSDQIDITHQESIVSQTPKMLSD
GFRSRMCTRSFNAPEVPPKGEPHVKRKPGPKPGPKQGLKPGPKSGPKPGAKPGPKPGLKP
GLKPGPKPGPKPGPKPGPKPVQNEPELPQKIETPVKRKPGPKPGSNPAPKPGPKPSQKAA
PKPGPKPGPKSADVLPPDDTSPIKPSVGRPKGSVSKAKTVQQEEILPPLPDLPSRVRKSP
TVTISQVNQDVKAVNQEEKQPNPEVKAPEKEGKNMILRSRKPSQEKLSKEKIKAEDILPQ
TLTEIKPSDDSPKVEESDILEQPPTPIPNAVKNRDVPADPPTPLAQPVPTEPSEEKTSLP
LKRKTSPELSTTPVKKKRGPKPKPKTIPPQPPLLEQVVSTPKEKGVRGTRRKRGPPKKTS
SVAPPPKDTPPNISETDIASDVPVVPPQGPTRTKVLPPRKGRGQKYEAMVQKITSPSSKK
HLPIPQIDTNLTDDVTAKALSQHVLKEGEATMLINSTEMIEGEVKSIESRQEGVKQPEGV
DRKKEITQEDEKREVIQEAVTPDEVRQRVTEELLNKAETRQQNSETKTQQDAGADKVWSS
IDPPEEVRALGDSALQALESVSSASKSSRTKRKRWAMVESTDATIVALEAGSLIVTTPRL
AKQRAIKNNHEMHLKQRRKKRKGQASLEETETVEETHIETAEQQHEKEEEKVTPTEPTRP
LPISTDEITEAPQVTSTELIKKPRRGRKPSTNPSKRKRGKSSPEQVPGKPMKVHKKPGPK
PGMKDAMEVIEAVVRAAGCESIQKEEREKEEMERRETEVDEKSEPCIMGPVVTLTEKQTE
IVTMKRIRRKPVHQNPNLSFCPYVRINNSRDFSSWCAIVNKPEDAVIFQRRRKKGILRMR
NPFTVAKGVPNTAAMLQGPLVKRDLIDNCLTCCLCGKPANYRDLGDLCGPYYTEDCVPRK
ILTMEHTESLREESQKTDSSSSDEPSNSLKNEGEGSTEKEGGTEASAQEGSSSRHHHWRY
RRAERAERTGQEAGPRRLTLRERFRRMQQLQAVSSGASSDQERGGSVFQRLQVEAESKEH
WAHENCTIWTKGVVMVAGRLYGLREAASNSAQASCFKCQIVGASLSCCWRGCSHKYHYVC
AKEIGCTFHEDDFSIKCPKHEDL
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgagagggctgggtggagcggagagatacaaactgaaaagggatgagaggggaggaaga
ggagggggaggcaaacagaccgatacagagagagtggggaaacggagacgatgtgaggag
gaggaggaggaagaggaggagggtggcgctggcagtggcaggacacgggtgcaggcgtgg
agactgtggcatgcatctcaagttggcatggactctatcactcactctcaggcctgggca
tggggccctcgaacccctaaccccccttccccccctttcccgtctcacctcacctccccc
tcccagctctggctacagacgcagagagttatgcagtccttccgtgagcgcagcggtggt
taccacagcaaccaaccctgctaccagcaggagcctcatgaattatcccgtctggagacc
taccggcaacacccgcatcatccccaccctcagcacccgcacccaggccccggtccgcac
ccaggccccggtccgcacccaggccccggttcgcacccaggccccggtccacacccaggc
cccggtccacacccaggccccggtccacacccaggcccaggcccagggcacaccaggtca
ggctatgaggctcatccactggcgaaccccaccaccatgcctccagctgggggaccggga
acagcaggagtacccaaggactgttacagccagcaagcataccctggttaccctggcaat
ggtggagggaatgggagtggaaatgggatcccagcatcctcgcaggcaaagaaatcctac
agaggaaccaaagtgcccccaccaaaccccggacaacacctacagggtcccgggggctat
agtaaccacatgggcccggggagttactcagcccagtatatgagtgagggtcacctccag
cagaaatgggaggactcagcccagttagcacagtatgacccggagatggtggggcgtatg
gaggctggtgggacccccgcacctgtgtcttctcagtatatggaccagaacatgctgggc
cactcgcagacccagtgccaccagccctccacccctgcctatactagcccccaccatcag
ccccaccccactaacccttccccctcccctctcatgtacccccagagtcaccttcattac
ccacagcactcaccctctccttcgccatacatggaaaagtgcagccctatgccccagtgt
tataaaggttacaacataccccccaactcccagtatggcagacaaatgagcagccacagc
aatctgaagccaggggcttaccggtcgacccagaacagttacggctaccagcagactccc
tccagaggttatgagcagcagccccctttacaggccatgcctaacccccaggagccccac
cctaaatatcaacactacagccaaccacaacagaactactgtctctctgagctgtctgtc
agatcaccagaacagtattatcagacctgcagcccctcctcaagccactcccctgcacgg
tctgtaggacgctccccctcgtacagctccaccccttcaccactaatgatcaatccagag
tcgttccagtatggccaacctcccatgacccctggggcagcttcatccgcttcatcctct
tcagctggtatacaggagcaaaccaataccaacaccatgttgatgcccccacgctcacac
ccctcacccaatgtgccccatgcagccccccacagctacactacgacgccacaggtcccc
accatgaaagagcgcttctcagagaagctgttgtcaaaccccagcttgtggagtctgaat
gccctcacctctcaggtagagaacatctcgaataatgtccagcagctgctgctttcagag
gctatggtggccaacaagaaaagcggtaagcgcagcagtggaggaagcaacagcagtgct
ggaactggagcatccgccaaaaagggtgaggagtacaaaagtcctgcttatccagatggg
ggtggtggtagtattggcggaggcgccatgcaggacccttattctacaccacagcaccag
ccaatgcccatggagctccaggagggagggtactccagcagtagtgatgaacagctggag
aggggatactactactgtggccagggcagaagtccagcacaggcccccaataacacacaa
ctcagcctggacacagcctcttcctgctcgatgacatctccagatgatatgtccaccagg
tctggggactcaggtctgcacaaccttacccctgatcctaatagatgtcagtcatcgcag
gggggagatggcatgagtactccagtgaagagcattggtgatgagaggtcgccgacaagc
tttacaatccccagtcctatgaaacaagaaagggactccccttcagatatacagcatatt
aacgagcctgtcaaagagaactttgaagaatcagcctggacagagaaaacgtccgagaaa
gaggaggtgtccacacaaaacactcctgaccatgaaagagattcagacacaactaaatca
acagagcatctggagaaatggtcagatgaagaaaaatgcccagctctctacagcaaagta
aacgaagaagagacagaaactaaatattgctataaggagactgtgtaccaagaggctcag
agcaaatatgaccctgatacaagagactcagttgaacaatccccagcagctctctctgac
accagccacaaggaacactttggccatgagatgaaatccgaggcgttcaagtctgagtca
ccaactgcgtctgagagctcagtgaaaacattgcctttcatttctaggggtgaccttgaa
caggatcaatattccacagagaaggaggacagctcagaaaacccctctcccagcccccaa
gttgaagccttggatgagagcaactcagacaaaagagaaaggagagatgatgaggatgag
gaagagatggaggaggaggggggtggacaggaggaggccaatgaagagcaagaagaagaa
atacagaaacaacaaccttctncttcccctcctctgtctgtagaggcaagggaggaactc
ggagagggggagaaagtgtcatccactgaggaacacatgaataacagagatgggcaagaa
aagcctcctggagatttctgcagcaggacagagagtgagagcactgagctccagactgac
aacgagccttcaggggcgcctgcccatccaaatgcagcagcagcaacagcagatgcttct
gcgagagagtcagccattggtgacactgctccccagcctcagtctgctatgccagttttt
tcggctctcaatgacaagacaacaccttcagctcagaccagagatcatattgatcacatt
gacactaaagtattggagccagattctcctcagctgccaggaaagtcaatacttccctca
gccccctcctgggctgacactccaccctcccccaaaaaaggcgatgaggacatggagccg
ggcatcagctgcgccagtgctgtgacccctttggccaagccagaacctgtggccccatct
gctcagccgagggcatttggacgtaagcatgccaggggcaggagaagaatcatgcattca
ggtgtgggaatcaggcgacagctaggcttggaaagggagggggaaaaggaagaggaagga
gcctcttcgcctacacagaagccctgcgtttctctaagcaaaacagagctgttttcagat
caaattgacataactcatcaagaatctattgtgagccagactcccaaaatgctatctgat
ggttttcgttcaagaatgtgtactcgctcattcaatgcaccagaggtgccacccaagggt
gagcctcatgtaaagagaaaaccaggcccaaaaccaggaccaaagcagggactcaaacct
gggccaaaatctggaccaaaaccaggagcaaaaccaggtccaaaaccggggcttaaacct
ggtctaaagcctggaccaaagcccgggccaaaacctggacctaaaccaggaccaaaacct
gtgcaaaatgaacccgagctgccacagaagattgagactcctgtgaaaagaaaaccagga
cctaaaccaggttcaaatcctgcgccaaaacctggaccaaaacccagtcaaaaagcagct
ccaaaaccaggacctaagcctggaccaaagtctgcagatgttttgccccctgatgacacc
tcacccatcaagccctcagttggtcgccccaaaggctcagtttcaaaagcaaagaccgta
caacaagaagaaatccttccacctttgccagacttgcctagcagggtcaggaagagccca
acagttacaatatcacaagtaaatcaggatgtgaaagcagtaaaccaggaagaaaaacaa
ccaaacccggaggttaaggcaccagaaaaggagggtaagaacatgatattgagatccaga
aagccctcgcaagaaaaactgtcaaaagaaaaaatcaaagcggaagatattctgccccag
acattgacagaaattaaacccagtgatgattcaccaaaagtagaggagtctgatattttg
gaacaacctccaactcctattcctaatgcagtgaaaaacagagatgttccagcagaccca
cccacaccacttgcccaaccagtcccaactgaaccatctgaagaaaagacatcacttcca
ttgaaacggaaaacaagcccagaactttctacaacaccagtaaagaagaagagaggtccg
aagcccaaaccaaaaaccataccaccccaaccccctctgctggaacaggttgtctccaca
ccaaaagagaaaggtgtcagaggtaccagaagaaagcgagggccacccaagaagacatct
tcagtcgctccaccacccaaagacactcctccaaacatcagtgaaactgatatcgccagt
gatgtgcctgtggtgcctcctcaaggccccactagaacgaaggttctcccaccacgcaaa
ggcagaggacagaagtacgaggccatggtgcagaaaataacatctcctagttcgaagaaa
cacctcccaattcctcagatagacactaatctaactgatgatgtgacagctaaggctttg
tctcaacatgtcttaaaggaaggtgaggcaactatgctcataaatagcactgaaatgata
gagggagaagtcaaaagtatagagtctagacaagagggagtgaaacaacctgaaggagtg
gatagaaaaaaggagattacacaagaagacgaaaagcgtgaggttattcaagaggcagta
acaccagatgaagtgagacaacgggtgacagaagagctattaaataaggcagagacaaga
caacaaaactctgaaacaaagacacagcaggatgctggagctgacaaggtttggagctca
atagaccccccagaagaagtcagggctctaggagattctgcactacaggccttagaaagt
gtatcttctgcttccaagtcctcgagaactaaaaggaagcgatgggcaatggtggagagc
acagatgccacaatagtagccttggaagcagggagcctaatagttacaacaccaaggctg
gccaagcagagggccattaaaaacaaccatgagatgcatctaaaacagaggagaaagaag
agaaaaggccaagcttctctggaagaaacagagacagttgaggagacacatattgaaaca
gcagaacaacaacacgagaaggaagaagagaaggtaacccccacagagcccacaagacct
ctgccaatcagcacagatgagattacagaagccccccaggttacaagcacagaactcatt
aagaaacctaggagaggcagaaaaccatccacaaatccaagtaagagaaaacgagggaaa
tcctcaccagagcaggttccaggcaagccaatgaaagtccacaaaaagcctgggccaaaa
cctgggatgaaagacgccatggaggttattgaggcagtagtaagggctgcagggtgtgaa
agtatccaaaaagaggagagagaaaaagaagaaatggaaagaagagaaacagaagtagat
gagaaatctgagccatgcatcatgggtcctgtggtaacactaaccgaaaaacaaactgag
attgttactatgaaaagaatcaggcgcaaaccagtccatcaaaatcccaatttgtctttc
tgtccttatgtacggattaacaactccagagacttctcttcttggtgtgccatagtcaac
aagcctgaggatgcagtcatatttcagagacgtagaaaaaaaggcatcctcagaatgaga
aatcctttcacagttgcaaaaggtgtgccaaacactgctgccatgctacagggacccttg
gtcaaaagggatctaattgacaattgtcttacatgttgcctctgtggaaagccagcaaac
tacagagacctaggtgatttgtgcggcccctactacacagaggattgcgtaccacggaag
attttgaccatggagcacacagagtccctcagggaagagtcacagaaaaccgacagtagc
agcagtgacgaaccgagcaactctttaaagaatgagggcgagggcagcacagaaaaggag
ggcggtacagaggcgtcagctcaagagggcagtagtagcaggcaccatcattggcgctat
cggcgggcagaaagagccgagagaacgggtcaggaggctggtccacgaagattaacgctc
cgagagaggttcaggaggatgcagcagcttcaggctgtcagctcaggggcctcgagtgac
caagagagggggggcagtgtgtttcaacggctacaagtagaagcagagagtaaagagcac
tgggcccatgaaaactgcaccatctggaccaagggggtagtaatggtagctgggaggctc
tacggactgagggaggctgccagcaactcagcccaagcgagctgcttcaagtgccagatt
gtgggggcgtccctcagctgctgttggagaggatgctctcataaataccactatgtctgc
gccaaagagataggctgcacattccatgaggatgacttctccatcaaatgtcctaaacac
gaggacctgtaa
DBGET
integrated database retrieval system
