Trematomus bernacchii (emerald rockcod): 117493385
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Entry
117493385 CDS
T09643
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117493385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117493385
Ion channels [BR:
tben04040
]
Ligand-gated channels
Serotonin (5-HT3)
117493385
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117493385
NCBI-ProteinID:
XP_033999804
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MSALRTLAFLALVASSSQASDCSYVGLLAHLNLASTNDLLATMRPVKVWTTPTLVHLDML
LYGILEVDEKSQTVTSQIWVQMFWTNEFLTWNSTDFCGINMLTVPRTRLWIPDIEIQEDT
SDAGSIHKSAVVKLYPNGSMFATTRERLTSTCQMDLLLFPFDTQECNITFSSMTSDENTV
QLESRKRGTALTEVSDHLMVTKGEWELQNMRIILRNVTKASKSKLIYKVSISRKPMLYVI
NLIVPLLFFLVLDLASFSISEARGEKLSFKVTILLSISFMLLILQDILPSTEANMPMIAK
YCLFIFTVVGLSVLEAMLVGYLYDLDGCCYKTAQSPADAQEDIQLEVDNQKEPAGAEGIP
DKSSLPLDGPVDGDLLKLILQEVKAARQEVDEHKDQRKTGRYRRAAVIIDRVFFFFYFLA
TGVFVSFMNTLWVSHIYNK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccctgaggactctggcttttctagctttagttgcttccagcagtcaggcttca
gactgctcatacgttggtcttctggcacatttgaacctggcgtcaactaatgatcttcta
gcaaccatgcgacccgtgaaagtctggactacacccaccctcgttcatctggacatgttg
ttgtatggcattttagaagtggatgagaagtctcagacggtcacaagccaaatttgggtc
caaatgttttggacaaatgaattcctaacttggaattctacagacttttgcgggataaat
atgctgactgttccaagaaccaggctgtggatcccagatattgaaatccaagaggatacc
tctgatgctgggagcattcacaaaagtgcagtcgtgaaattgtatcccaacggttcgatg
tttgcaactacacgagagcggctgacttccacctgtcagatggatctcttgctgttcccc
tttgatacgcaagagtgtaacatcacattttcatccatgacctcagatgaaaacactgta
caactagagtcacgcaagcgtggcacggccctcactgaggtctctgatcatttaatggtt
acaaagggcgaatgggaactccaaaacatgagaattattttaagaaatgtaaccaaagca
agtaaaagcaaactcatatacaaggtctcaatctccaggaagccgatgctctatgtgatc
aatttaatcgtcccactgctcttttttctggtcctggatttggcctcattctccatcagt
gaggccagaggtgaaaagctgagcttcaaagtgacgatactcctgtccatctccttcatg
ctgttgattcttcaggacattttgccctccactgaagcaaacatgccaatgatcgccaaa
tactgccttttcatcttcaccgttgtggggttaagcgtcctggaggccatgctggtgggc
tacctatacgacctggatggttgctgctataagacggctcaaagccctgctgacgcacaa
gaggatattcagttggaagttgacaatcagaaagagcctgctggagctgaagggatccct
gacaaaagttcccttcctctggatgggcctgttgacggcgacctgctgaaactgatcctg
caggaagtgaaagcagctcgacaggaagttgatgaacacaaagaccagagaaagaccgga
cgctacagaagagcggctgtaatcatagaccgtgtcttctttttcttctattttttagcc
actggtgtttttgtctcattcatgaatacattgtgggtttcacatatatacaacaaatag
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