Trematomus bernacchii (emerald rockcod): 117493386
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Entry
117493386 CDS
T09643
Symbol
notch3
Name
(RefSeq) neurogenic locus notch homolog protein 3
KO
K20995
Notch 3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04330
Notch signaling pathway
tben04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117493386 (notch3)
04371 Apelin signaling pathway
117493386 (notch3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
EGF_3
Notch
NODP
NOD
Ank_3
Ank_4
Ank_5
EGF_Teneurin
cEGF
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
117493386
NCBI-ProteinID:
XP_033999805
LinkDB
All DBs
Position
Unknown
AA seq
2467 aa
AA seq
DB search
MDYFVILLFMQICYGFRCLDKFKPCDNGGTCLDSPSRCICRPGFIGPLCKQLDPCYQSPC
LNGAACKSQVVNGIPQFTCVCQRGFRGKDCSLIDACATSPCANGARCAHWNNHYNCSCPP
GFQGKNCRSDIDECRKPGMCLNGGLCMNTHGSFRCQCQPGYSGRTCEVSVLPCAPSQCMN
GGTCRQTSDHSYECACLPGFQGHNCENNVDDCPGHKCMNGGICVDGVNTYNCQCAPEWTG
QYCAEDVNECLMQPNACHNGGTCFNTIGSHTCVCVNGWTGDDCSENIDDCAIAVCFFGAT
CHDRVASFFCECPVGKTGLLCHLDDACVSNPCNEGAVCDTNPLNGRAICTCPAGFVGGAC
NQDMDECSIGANPCEHFGKCVNTEGSFQCQCGRGYAGPRCEIDINECLSMPCQNDATCLD
RIGEFTCICMPGYMGTYCEVDVDDCESNPCVNDGICRDMVNGFTCTCQPGFTGTMCQIDI
DECASTPCQNGAKCYDRPNGFECRCSEGYEGTLCDSNINNCQPDPCHHGTCIDGIASYSC
NCDAGYTGYRCENQLNECHSNPCQNGGKCVDLVNKYICQCQHGTSGTNCEINFDDCSSNP
CDYGICKDGINRYDCVCKPGFTGSKCNMEIDECSSSPCRNGGTCVDEENGFHCQCPEGFK
PPYCYSQVDECGSSPCVHGSCRDDINGYRCDCEPGWVGKNCDLDRNDCLPSPCQNAGTCI
DQLNGFTCKCRQGFRGNLCQMNINECASSPCLNKGTCVDGVASFTCLCELPYNGPTCAEV
LTPCSPNPCANHALCTHTPDYLGYQCNCQTGWQGQLCNVDVNECISNPCKNRGTCTNTLG
GFVCSCRAGFTGLTCETDVNDCTPNPCLSGGSCTDAVNSFHCSCLAGFTGPRCALEINEC
QSSPCKNGGTCTDYVNSYTCTCKPGFTGNHCETNIPDCTESSCFNGGSCTDKINGYSCNC
RSGFTGSHCQYEVNECDSQPCLNAGICQDALESFRCSCPKGYTGSRCQTPVDWCRRPSTC
ENGGRCRQKDASFTCECTNGWSGRDCDISRVSCETAARKRGLQTDELCLHGGHCVNTGNS
HYCKCPTDYTGSYCKTQVDHCEDKPCRNGATCRGYVGGYQCDCMPGFTGQNCEIEINECQ
SHPCQNGGTCIDLVGHYICSCPPGTLGVLCEINEDDCALPLRLRSAPPKCLNNGTCVDRV
GGYRCNCPPGFKGERCEGDINECLSNPCSPPNSLDCIQLPNDYQCVCKPGFTGRKCQNSF
SVCESQPCQSGGVCSVSSSSAMGYTCTCQLGYAGLNCERSMSCRELPCYHGGSCALTQRG
ARCTCHPGYGGPQCQHRSNEGCSSKPCRNGGLCTEETSFPYFHCQCPSGWTGKRCEDIMP
NKPQVPICPLADCRSKAKDDVCDKECNTFFCDWDGGDCSLTSKNPWAQCSQCWSVFNNSQ
CDESCNNADCLYDNFDCMNKEKVCNPVYEAYCIDHYANGECDPGCNSVECGWDGLDCAKK
VPEVLADGVLVLVVLLPPEELQRTSTAFLQKLSAILHTSLRFQLDGNGDAKIHPYTRGAR
LKRELQPKQEVIGSIVYLEIDNRLCAAQSSEGCFPTAERAADYLGALSAVEMLRFPYPIK
EAVGVERDPHPDPIPQWAKLMLVGLASLFLMVILVLGMLIARRKREHSTLWFPEGFFLKK
EPSSNKNRREPVGQDALGMKHMAKTAEESLLGDHSDQWMDTDCPEAKRLKVEEPSMLSDS
EDAVDCRQWTQHHLAAADIRVPPTMALTPPQGEFESDCMDVNVRGPDGFTPLMLASFCGG
GLEPEVTEEEESEECSANIISDLIYQGASLAAQTDRTGETALHLAARYARADAAKRLLDA
GADANAQDNTGRSPLHAAVAADAQGVFQILIRNRATDLDSRMYDGSTALILAARLAVEGM
VEELITCHADVNAVDELGKSALHWAAAVNNVEATVALLKNSANKDMQDLKEETPLFLAAR
EGSCEAVKVLLAHFANREITDHMDRLPRDIAQERMHHDIVQLLDEYNTVRSPQGHGGIGH
HLSGVHSLSPLMCPPGAYMPSLKNTPQGKKNRRPCAKGSSLGGQHAASLKESVKARNKKL
TLDMQSALLESSVTLSPVDSLDSPHGGASNAGYMTNPTSPVAMQSPGLYHTSMSVPNTPM
IHSSMLDGSGPFAVSLAQLNDLGSGGMSLQGRVSMASDVNHGYVMSSGQMGLNMGLVSPV
SVPFDWHSRMSSSQCGQQVLNLVQSGQAGMHPQSPAMQQQTMLMHQQLYRNAMLQPTPVT
STPTISPVKLPSIAEQQQQQQQQQQQLLNHTIANQQNMARIGTSSPPTPQTSQPPPSFFQ
QQQMPQQPSQPQLPAQPPQAAPPAAQPSQALPSQHSGSTAGTEDYPTPPSQHSYSSALDA
TPKHYLHLPSEHPYLTPSPESPEPWSSPSPHCVSDWSDSTPSPAVAGPAQTHISQIPEAN
GKMQVFA
NT seq
7404 nt
NT seq
+upstream
nt +downstream
nt
atggattattttgtcattttattgtttatgcaaatttgctacgggttccgatgcctggat
aaattcaaaccttgtgataatggagggacatgcttagattcaccctctcgatgcatatgt
cgtccaggattcattggtcctctgtgtaagcaactggatccctgttatcaatcgccatgt
ctgaacggagcagcttgcaagagccaggtggtcaatggtatcccacaattcacctgtgtg
tgccaaagagggttcagaggcaaagactgctccctcattgacgcatgtgccacaagtccc
tgtgccaatggagcccgttgtgcccattggaataaccactacaactgttcctgcccacct
ggcttccagggaaagaactgccgcagtgacattgacgagtgccgcaagcctggcatgtgc
ctcaatggtggcctctgcatgaacacccatgggtccttccgatgccagtgccaacctgga
tacagtgggcgcacatgtgaagtgtccgtccttccctgtgccccatctcagtgcatgaac
gggggcacctgtcgacagaccagcgaccattcctacgagtgtgcttgcctaccagggttc
cagggacacaactgtgagaataatgtggatgactgtccaggacacaagtgtatgaatgga
ggaatatgtgtagatggagtcaacacgtacaattgtcagtgcgcaccagaatggacaggg
caatactgtgctgaggatgtcaacgagtgtctcatgcaaccaaacgcctgccataatggg
ggtacttgcttcaacaccattggtagtcatacatgtgtctgcgtgaatggttggactgga
gatgactgcagtgagaacattgatgactgcgccatagctgtttgtttctttggggccacc
tgccatgaccgtgtggcatccttcttctgcgagtgtccagttggaaagacaggtttgctg
tgccaccttgacgatgcatgtgtgagtaacccctgcaacgagggggcagtgtgcgacacc
aaccccctcaacggccgcgccatttgtacctgtcccgccggctttgtaggaggtgcatgc
aaccaggacatggatgagtgttcgattggtgccaacccatgtgagcattttggaaaatgt
gtaaacacagagggctccttccagtgtcagtgtggccgaggatatgccggtccacggtgt
gagattgacatcaatgaatgcctctccatgccctgccagaatgatgccacttgcctggac
cgcattggagagttcacctgcatctgcatgccaggttacatgggaacgtactgtgaggta
gacgttgacgactgtgagagcaacccatgtgtgaatgatggtatctgtcgggacatggtc
aatggcttcacatgcacctgccagccagggtttactggcaccatgtgtcagatcgacatc
gatgagtgcgccagcacgccatgccagaatggggcaaaatgctacgacagaccaaatggg
ttcgagtgccgctgttctgaaggttatgaggggacactctgtgacagtaacatcaacaac
tgtcagcccgacccatgccaccatggtacttgcattgatggtattgccagctacagctgt
aactgtgatgctggctacacaggctatcgctgtgagaaccagctcaatgagtgccacagc
aacccttgtcagaatgggggaaagtgtgtggatctagtcaacaagtacatctgccagtgt
caacatgggacatcaggcacaaactgtgaaataaactttgatgattgctccagtaaccca
tgtgactatggtatttgcaaagatggcatcaaccgatatgactgtgtttgcaaacctggc
ttcactggttccaagtgtaatatggagatagatgagtgctcatccagcccctgtagaaat
ggggggacatgtgtggatgaagagaatggatttcactgccagtgtccagagggctttaag
cctccatactgttactcccaggtggacgagtgtggcagcagcccatgtgtccatggctca
tgcagggatgacattaatgggtaccgctgtgactgtgagcctggatgggtcgggaagaac
tgtgatctagacaggaacgactgtttgccgagtccctgccagaatgctggcacatgcatc
gaccagctcaatggcttcacctgcaagtgtcgccaaggcttcagaggtaacctatgccag
atgaacatcaacgaatgtgcttccagtccctgtctgaacaagggcacttgtgtggacggt
gtagcaagcttcacctgtctgtgtgagcttccttacaatggacccacttgtgctgaggtc
ctcaccccttgctcccctaacccctgtgccaatcatgccctctgcacacacacaccagat
tacttgggctatcaatgcaactgtcagacaggttggcaaggtcaattgtgtaatgtggat
gtaaatgaatgcatctccaacccctgcaagaatcgtgggacctgcactaacacacttgga
ggctttgtgtgctcctgcagagctggatttactgggctaacatgtgaaacagacgtcaac
gactgtactcctaatccatgcctaagtggaggttcctgcacagacgctgtgaactccttc
cactgtagctgcttggcaggcttcactgggccccgctgtgctttagagatcaatgaatgc
cagagttcgccgtgcaaaaatggaggcacatgcacagactatgttaactcctacacctgc
acctgcaagccgggctttactggcaaccactgcgaaaccaacatccctgattgcactgaa
agctcttgtttcaatggaggttcttgcacagataagatcaacggctattcctgtaactgc
cgctcaggcttcactggctcccactgccaatacgaggtcaacgagtgtgactcccagccc
tgcctcaatgcaggcatctgtcaagatgccctagagtccttccgctgctcctgccccaag
ggctatactggctcccgctgccagacacctgtcgattggtgcagacgcccatctacctgc
gaaaatggaggacgctgtcgccaaaaggatgcttccttcacctgtgaatgtactaacggc
tggtctggacgtgactgtgacatctccagggtctcttgtgagacagccgcacgcaaaaga
gggctccagacagatgagctgtgcctccatggtggtcactgtgtcaacactgggaattcc
cactattgtaaatgccccactgactacacaggaagctattgtaaaacccaggtagaccac
tgtgaagacaaaccctgccgcaatggcgccacctgcaggggatatgtgggagggtaccag
tgtgattgtatgccaggatttactggacagaactgcgagatagagatcaatgagtgccaa
tctcatccttgccagaatggaggcacttgcattgatctggtgggacattatatctgctcc
tgtccgcctggcacacttggtgttctctgtgagataaatgaagatgactgtgctctacct
ctgaggctgcgcagtgctcctcctaaatgccttaacaatggcacctgtgtggacagagtg
ggtggataccgctgcaactgtccccctggatttaaaggagaaagatgtgagggagacata
aacgagtgtctctccaacccctgcagtccccccaacagtcttgactgcatccagttgcca
aatgactaccaatgtgtctgcaaacctggcttcactggccgaaagtgtcagaacagtttc
agtgtgtgtgagtctcaaccttgtcagagtggaggagtgtgttctgtatccagcagctct
gcaatgggatacacctgcacatgtcagcttggttatgctgggcttaattgtgaaagaagc
atgtcctgtcgggagctgccctgctaccatggtggtagctgtgcactcacccaaaggggg
gcgcgttgcacctgccatccaggttatggtggaccccagtgccagcatcgcagcaatgaa
ggctgttcctccaagccctgccggaatggagggttgtgcactgaagaaacaagcttcccg
tactttcactgccagtgtcccagtggctggacagggaaacggtgtgaggacatcatgccc
aacaagcctcaagtacccatatgccctctagcagactgtcgtagcaaagccaaagatgat
gtttgcgacaaggaatgtaacactttcttttgtgactgggacggcggggactgttctctt
acatcaaaaaacccctgggctcaatgttcacaatgttggagtgtctttaacaacagccag
tgtgatgagtcctgcaacaacgctgattgtctgtatgacaactttgactgcatgaacaag
gagaaagtttgcaatccagtgtatgaagcctactgtatagaccactacgctaatggagag
tgtgaccccggctgtaactcagtggagtgtggctgggatggtttggactgtgcaaagaag
gttccagaagtccttgctgatggtgtcttggttttggtagtcctacttccccccgaggag
cttcaacgcaccagcacagcttttctgcagaaattaagtgctatcctacacacctcactg
cgcttccagctggacgggaatggagatgccaagatccacccatacactcgcggggcacgc
ctcaagcgggagctgcagcctaaacaggaggtcatcggatccatagtgtacttggaaata
gacaaccgtctgtgcgccgctcagagctctgagggctgtttcccaacagctgaaagagct
gcagactacctgggagctctgtcagctgtagaaatgcttcgcttcccatacccaatcaaa
gaagccgttggtgttgaaagggatccccatcctgacccaatacctcaatgggccaagctg
atgctggtcgggttagcttcccttttccttatggtcatcctggtgctaggaatgttgatt
gctcgtagaaagagagaacacagtaccctttggttccctgagggcttcttcttaaagaag
gaacccagcagcaacaaaaaccgcagggaacctgtgggtcaggatgctcttggaatgaaa
cacatggcaaaaactgcggaagaatctctccttggtgatcacagtgaccagtggatggac
acagactgtccagaggcaaaaaggcttaaggttgaggagccaagtatgctctcagacagt
gaagatgcagtggactgcaggcagtggacacagcatcacctcgcagctgcagatatccgt
gtgcctcccactatggccctcaccccaccccaaggagaatttgaaagtgactgcatggat
gttaatgtccgaggcccagatggttttacacctctgatgctggcatcattctgtggaggc
ggcttagagcctgaggtgacagaggaggaggagagtgaggagtgttctgccaacatcatc
tctgacctaatctaccagggagcttccctagctgcccaaacagaccgaactggggagaca
gcgctccacctggctgctcgctacgcccgtgctgatgctgctaagaggctgctggatgct
ggtgcagatgctaatgctcaggataacaccggtcgctcacctctacatgctgcagtggcc
gcagatgcacagggggtcttccagattctgatccgaaatcgggctacagatcttgactcc
cgtatgtacgatggctccactgcgctgatcctggcagcacgactggcagtagagggcatg
gtagaagaactcatcacttgtcatgctgatgtcaatgcagtagatgaattgggtaaatcc
gccttgcactgggctgcagccgttaacaatgtggaggcgactgttgccctgctgaagaac
agtgcaaacaaggacatgcaggatctcaaggaggagaccccactgttccttgcagctcgt
gagggcagctgtgaggctgtgaaggtgctgctggctcactttgcaaacagagagatcaca
gaccatatggacaggttgccacgggacattgctcaggagcgtatgcaccacgatattgtg
cagcttcttgatgagtacaacacagtaagaagcccccagggccatggagggattggacac
cacctctctggggtacactctctgtctcctctcatgtgccctccgggcgcctacatgcct
agtctgaagaacaccccacagggcaagaagaaccgcaggccttgtgctaagggttctagc
ctgggaggccaacatgctgccagcctgaaggagtcagtcaaggcccgtaataagaagctg
accttggacatgcagagtgccttactggagagctctgttaccctttccccggtcgattca
ctggactcaccccacgggggggctagcaatgctggctacatgaccaaccccacttcccct
gtggccatgcagtcaccagggctctaccacacatctatgtctgtcccaaacacccccatg
atacatagtagcatgttggatggtagtggcccctttgcagtgtctctagcccaactcaat
gacctaggatctggaggaatgtccttgcagggacgtgtctccatggcttcagatgtcaac
catggctatgtgatgagttcaggccagatggggctcaacatgggcttggtcagtcctgtg
agtgtgccctttgactggcacagccggatgtcttcctctcagtgtggtcagcaggttttg
aatcttgtgcagagtggccaggcaggcatgcacccccagagcccagccatgcagcagcag
accatgctgatgcaccagcagctctaccgtaacgccatgctgcagcccacacctgttact
tcaacacccaccatcagcccagtcaagctgccttccattgctgagcagcagcagcagcag
caacagcagcagcagcagctcctcaaccacaccatcgccaaccagcagaacatggcccgc
attggcacctcttccccaccgactcctcagacctcccagccgccaccatccttcttccag
cagcagcagatgccccagcaaccctctcagccccagcttccagctcagcccccccaggca
gcccctccagcagcccagccctctcaggctctgccctcccagcatagtggcagcactgca
ggaacggaggattaccctacacctccctctcagcacagctactcatctgcactagatgcc
acgcccaagcattacctccatttgcccagtgagcacccctacctgaccccctccccagag
tctccagagccctggtccagcccctctcctcactgcgtctctgattggtcagattctaca
ccaagcccagcagtagctggtcctgcccagacccacatttctcaaatcccagaggcaaat
ggcaagatgcaggtgtttgcgtaa
DBGET
integrated database retrieval system
