Trematomus bernacchii (emerald rockcod): 117493387
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Entry
117493387 CDS
T09643
Symbol
brd4
Name
(RefSeq) LOW QUALITY PROTEIN: bromodomain-containing protein 4
KO
K11722
bromodomain-containing protein 4
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tben01001
]
117493387 (brd4)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tben03021
]
117493387 (brd4)
03036 Chromosome and associated proteins [BR:
tben03036
]
117493387 (brd4)
Protein kinases [BR:
tben01001
]
Serine/threonine kinases: Other
BRD family [OT]
117493387 (brd4)
Transcription machinery [BR:
tben03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Brd4/P-TEFb complex
117493387 (brd4)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117493387 (brd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BET
BRD4_CDT
Motif
Other DBs
NCBI-GeneID:
117493387
NCBI-ProteinID:
XP_033999806
LinkDB
All DBs
Position
Unknown
AA seq
1614 aa
AA seq
DB search
MDYKMHAKSNDLLDFQKLDALLEKIAHSVSVKRESSEECNGISGALSVESVPGPRLSWCP
ANTTTPAPAAPAPAWGTEPAPHPVRMGDGLDAAQMSGSNSSSSSGQGQAQQGGNPPPPEY
INPNRQKRQTNQLQYLLKVVVKGLWKHQFAWPFLIPVDAIKLNLPDYYTIIKIPMDMGTI
KRRLENSYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAESLEKAFLQRVTEMPQEETE
IVVMTGKGRGRGRREGGLNLKPGGIIDSSSTIPLTRGVSNLSAAPQIRGPVQGPPSLPPQ
PLMQALPSHMPPTLPSHAPQLGAPYSMSHSDCAPQVPIMTSVPPPAQTALPPASIQNVAP
MLQNPITMTKIRKSQKRKADTTTPTANDQLSESSPAESKSGKTLPRRESARPPKLLKKEA
PDSQHHIGMVMGLSGPSGGHSPKPQDQLGYCASVVRDMLSKKHAAYAWPFYKPVDVAALG
LHDYHDIIKYPMDLSSIKLKLENRQYREPQEFAADVRLMFSNCYKYNPPDHEVVAMARKL
QDVFEMRFAKMPDELETKPLVTPPPPVLHHPAPVKPQPPLAHVASSSDSSSDSSSESESS
TDDSEEERVQRLAELQDQLKAVHEQLAALSQPQASKPKRKEKEKEKKEKEKEKEKEKKKE
KHKKKGGMSGHVDEIQDATPVPQLSKKNKSRDHSNKDSAPRKKSSKKEAMKLNHPTNLLP
VPSLEEDLGAAGSSSSGEKGKPMTYEEKRQLSLDINKLPGDKLGRVVHIIQSREPSLKNS
NPDEIEIDFETLKPSTLRELERYVSSCLRKKKKFPAEKPVESMATSKKTGSSSESSGSST
DSEAEATGIIKHQKKKGHSAKEGKKPHPHLHIQSGPAQAGLHSHIAGLQASIQMKQQHQP
SPAGFTAPPVAALESSQLLETSFESLPPFGQPLMHLSHHQGNSQSSPAAPHLNAHSAGPV
SPETHPFLNQHPVLTSPALHISMPQQPSRPSHKAAPLHPKAPQQQAAPPQQQPPLQQQQQ
QQQQQQQPPPQAAAPPPQHQLPPQILHPAQPLHQRPMSPPTLTPQGLLSSQPPQMLLEDD
DEPESTTPLNQVQLYLQQFQQSRQPQQPQQPQQPQQPQQSMQSLQAQVRQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPGQISLLQSVQGQSQLPSQTTLPPP
QLTIQSQTQPAPSHQXAPPPQMPLHPARHMQQQQQQQPQQQPQQQQLNYPQGPGLAGQSQ
GSQHKVSMPPNKAQQIIQQQQQQQPSPRPPKADPYNAGHIRDNPSPLMMHSPQLPQFPPV
SHQSPPQNMQSKKQRGQGNHSVVKEEKLPPSPVMRGEPFNPAMRPDHHKHPDNKPSQTSH
GPQNVKSMDSSRPVIRSSESSGPPPSLQDKDKFKQDSKTPIAPKKVQDVKLKNMGSWASL
AQKSTSTPMSAVKSSSDSFEQFRRAAREKEEREKALKAQAEQVEKDRQRREQDKLRGRDE
EDIMEPTRRVHEEPRRRQEQQHIQAPSQQQQQQQQQQQQQQPQPQQQQEPPPAAIQQPPA
PPTPPQPAAQNPLDQQRELARRREQERRRREAMAATIDMNFQSDLMAIFEENLF
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atggattacaagatgcatgccaagtcaaatgatttgctggattttcaaaaactggacgcc
cttctggaaaaaattgcacattcagtctctgtgaaaagagagtccagtgaggagtgcaat
gggatcagcggtgctctgtcagtggagtctgtgccggggccaagactgagctggtgtcct
gccaacaccactacccctgcccctgcagctccagctcctgcttgggggactgagcccgcg
ccccaccctgtcagaatgggagacggcctggatgcagcgcagatgtcgggcagcaacagc
agtagcagcagcggccaggggcaggcccagcaaggtggcaaccccccacccccagagtac
atcaatcccaacaggcaaaagcgccagaccaatcagctgcagtacttgctcaaggtggtg
gtgaagggcctgtggaaacaccagtttgcctggccctttcttataccagtggatgcgatc
aaacttaacctgcctgactactacacaataatcaaaattcctatggacatgggaacaatc
aagagaaggcttgagaacagttactactggaatgcccaagaatgtatccaagacttcaac
acgatgtttaccaactgctacatatacaacaagcccggagatgacatagtcttaatggct
gagtctctggagaaggctttcctccaaagggtcacagaaatgcctcaggaagaaactgag
attgttgtcatgacagggaagggacgtggcaggggccgaagagaaggaggtctgaacttg
aaaccagggggcatcattgattcttcgtccacgatccctctaacacgtggtgtgtcgaac
ctctcggcagcaccacagatcaggggaccggtgcagggcccgccttcactacctccccag
cctttgatgcaggccctgccgtcccacatgccccccacgttacccagccatgcgccacag
ctcggggccccctactcgatgagccactcagactgcgctcctcaagttcccatcatgact
tctgtgcctccccctgctcagaccgcgctccccccagcatccatccagaacgttgcaccc
atgctgcagaaccccattaccatgaccaaaatacgaaagagccagaagaggaaagctgac
accaccactcccacagcaaatgaccaactgagtgagtcttcaccagcagagtccaaatct
gggaagaccctacccaggcgagagagtgcgcggcctcctaaactgttgaagaaggaggct
cctgactcccagcatcacatcggcatggtgatgggactgagtggaccaagtggcggtcac
agccccaaaccacaggatcagctaggatactgtgcaagtgtggtcagggacatgctgtcc
aagaagcacgctgcttatgcctggcccttctacaaacctgtggatgtggctgcgctggga
ctacacgattatcatgacatcatcaagtatcctatggacctcagcagcatcaagttgaag
ctggagaacaggcaataccgagaaccccaggagtttgctgctgacgtacgattaatgttt
tccaactgctacaaatataatcctccagaccatgaggtggtagccatggcccgcaaactg
caggatgtctttgagatgcgctttgccaagatgccagatgaacttgagaccaagcctctg
gttacccccccacctcctgtacttcaccaccctgcaccagttaagccccagcctcctctg
gcccacgtggcctcgtcctcagacagctccagtgactcgtcctccgagtccgagtcttcc
acagacgactctgaagaggagagagtccagaggttagcagagctccaggatcagttgaag
gctgtccacgagcagttggctgccttgtcccaaccacaagccagcaaaccaaagagaaaa
gaaaaagagaaggagaagaaggaaaaggaaaaggagaaggagaaggagaagaagaaagaa
aagcataagaaaaagggaggtatgtctggccatgtggatgagatccaggatgcaacacct
gtcccgcagctctctaagaagaacaagagcagagaccatagcaacaaggacagtgcacca
aggaagaaatctagtaaaaaggaagcgatgaaactcaatcatcccaccaacctgctgcca
gttcccagcctggaagaggatctgggagctgctgggtcttcgtcctcaggggaaaaaggc
aagcctatgacgtacgaggagaaaaggcagctcagcttggacatcaacaagcttcctggg
gacaagctgggccgtgtggtgcatatcatccagtccagagagccttcactcaaaaactct
aaccctgatgagatcgagattgactttgagacgctaaagccttccactctgcgcgagctg
gagagatacgtgtcttcctgcctccgcaagaagaagaagtttccagctgagaagcctgtg
gagtccatggctacctccaaaaagactggttcctcctcagagagcagcggctccagcaca
gacagcgaggctgaagcgacaggaataataaagcatcagaagaaaaagggccactctgcg
aaggaggggaagaagcctcatcctcatttacacattcagagtggccccgctcaggctggg
cttcattcccatatagcaggccttcaggctagcatccagatgaagcagcagcatcagccg
tctcctgcaggcttcaccgccccccccgtagctgctctggagtcttcccagctactggaa
actagcttcgagtccctgccgcctttcggccagcccctcatgcatctgtcccatcaccaa
ggcaactcccaatcctcacccgcagctccacatctcaacgctcattctgctgggccagtg
tcccctgaaacccaccccttcctcaaccagcatcccgtccttacgtctccggccttgcac
atctccatgcctcagcagccttcccgacccagtcacaaggcggcgcctcttcatccaaaa
gcccctcagcagcaagcagcacccccccagcagcagccccccctgcagcagcagcagcag
cagcagcagcagcagcagcagccccccccccaggcagcagctccaccaccacagcaccag
cttcccccccagatcctccaccctgctcagcctctgcaccagcggcccatgtccccccca
acactcaccccccagggcttgctctcctcccagcctccccagatgctgctggaggacgat
gatgagccagagtccaccacccctctgaaccaagtacaattatacctgcagcagttccag
caatcccggcagccccagcagccccagcagccccagcagccccagcagccccagcagtcc
atgcagtcacttcaggcgcaggttcgtcagcagcagcagcagcagcagcagcagcaacaa
caacagcaacaacagcaacaacaacaacaacaacaacagcaacaacaacaacaacaacag
cagcagcagcagcagcagcagcagcagcagcaacaacaacaacaaccaggacagatctct
ctcctgcagtctgtgcagggacagtctcagctcccctcccagaccaccctgcctccccca
cagctcaccattcagtcccagacgcagcccgccccttcacatcagnnggccccgccccca
caaatgcccctccacccggcccgccacatgcagcagcagcagcagcagcagccacagcag
cagccacagcagcaacaacttaactacccgcagggtcctggactcgctggtcagtcccag
gggtcacaacacaaggtatccatgccccccaacaaagcacagcagatcatccagcagcag
cagcagcagcagccctcccctcgcccgcccaaggctgacccttacaacgcaggtcacata
agggacaacccatcgcctctcatgatgcattccccacaacttccccagtttccacctgtg
tcccatcagtccccacctcaaaacatgcagtccaaaaagcagaggggccaggggaaccat
agtgttgtgaaggaggagaaacttcctccatcaccagtgatgagaggagaaccattcaac
ccggccatgagacccgaccatcacaaacatcctgataacaagccttctcaaacaagccac
ggcccacagaatgtgaagtccatggacagctcgcgacctgtgatccgctcctctgagtcc
agtggaccgcctccctctctgcaagacaaggacaagttcaagcaggactccaagacacct
attgcccccaaaaaggtacaggatgtcaaattgaagaacatgggctcatgggccagcctt
gcccaaaagtccacatccacacccatgtctgcagtgaagtcatcgagtgacagttttgag
cagttccgtcgagcggcccgggagaaggaggagagggagaaggctctgaaggcccaggcc
gagcaggtggagaaggacagacaacgcagagagcaggacaaactacgagggcgggatgaa
gaggacatcatggagccgaccagacgggtgcacgaggagccgcgccggcgtcaggagcag
caacacattcaagctccctcgcagcagcagcagcagcagcagcagcaacaacaacaacaa
caaccgcagccgcagcaacagcaggagcccccgcctgctgccatccagcagcctcctgcc
ccccccaccccgcctcagcccgctgcacagaacccactcgaccaacagagggagctcgct
cgccgccgagagcaggagaggaggaggcgagaagcgatggcagcaacaattgacatgaat
ttccaaagtgacttaatggctatctttgaggagaacctgttctga
DBGET
integrated database retrieval system
