Trematomus bernacchii (emerald rockcod): 117493398
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Entry
117493398 CDS
T09643
Symbol
slc27a1a
Name
(RefSeq) long-chain fatty acid transport protein 1a isoform X1
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
117493398 (slc27a1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tben01004
]
117493398 (slc27a1a)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tben02000
]
117493398 (slc27a1a)
Lipid biosynthesis proteins [BR:
tben01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
117493398 (slc27a1a)
Transporters [BR:
tben02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
117493398 (slc27a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
KTSC
Motif
Other DBs
NCBI-GeneID:
117493398
NCBI-ProteinID:
XP_033999826
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MTRMHNAASVSASLGSMGLLRLFGVSWPWSLAAGLGVYLGTRSWKYFYIAARTAKRDLNG
LYVLMRVKVALWRYMRNGSNIPSIFAQTVKRHPNKPALIYEATGEIWTFTQLDEMSNAVA
HWARGQGWVSGDVVALFMESRPLQVALWLGLAKVGVEAALINFNLRNDSLVHCVEVSGSR
AIVFGTELADAMSEVSSSMNQAMVRFSTGDLGAEHLALLGAQPLDPILALSPKHHPTPCV
PPKGMNDRLFYIYTSGTTGMPKAAIVVHSRYYRIAAFGYFAFRMSPVDIIYDCLPLYHSA
GNIMGVGQCLIHGLTVVVKKKFSASRFWEDCIKYNCTVVQYIGEICRYLLSQPVRPSEKG
HKVRLAVGNGLRPSVWEAFTERFGVAQIGEFYGATECNCSIANMDGKVGACGFNSRILPN
IYPIRLVRVDEDSMELVRDSRGLCVTCRPGEPGLLVGRINQQDPLRRFDGYANQDATKKK
IAHNVFKKNDSAYLSGDVLVMDEFGYMYFRDRGGDTFRWRGENVSTTEVEGVLSSLLCQT
DVAVYGVTVPGVEGKAGMAAIADTTGTFDCNSFLQKVQHALPSYARPVFLRISPQVDTTG
TFKIQKTRLQREGYDPRRNTDQIYFLNTRASCYEAVDEELYNAIAEGRMSL
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaatgcacaatgcggcgagtgtctcagcctctctggggtccatgggactgctg
cgcctctttggggtctcctggccctggagtctggcagcaggcctcggagtttatctgggc
acaagaagctggaaatacttctacatcgcagcacgcaccgccaagagagacctcaatggc
ctgtatgtgctgatgagagtgaaggtggctctatggcgctacatgcgtaatggaagtaac
attccttccatattcgctcagacagtgaaacggcacccaaataaaccagcactgatctat
gaggccacaggggaaatatggaccttcactcagctggacgagatgtctaatgccgtggcc
cactgggccagaggtcaggggtgggtctcgggtgatgtggtggccctcttcatggaaagc
agaccgttgcaggtggctctttggctgggcttggccaaggttggggtggaagctgcactc
atcaacttcaacctgcggaatgattccctcgtgcactgtgttgaggtgtcggggtcccgg
gccattgtgtttggaactgagcttgctgatgccatgtcagaggtcagttcctccatgaac
caggccatggtacggttcagtacaggggacctcggtgcagaacatctggcccttctgggt
gctcaacctctggacccaatcttagccttgtcacctaaacatcaccccacaccttgtgtt
ccccccaaaggcatgaatgaccgtctattttacatttacacctccggcaccacaggaatg
ccaaaggctgccattgttgtacacagtcgttactacagaattgctgcttttggatatttc
gcctttcgcatgagcccagttgacatcatctatgactgcctgcctctctatcactcagca
ggtaatatcatgggtgtcggtcaatgtctgatccatggcctcactgtggtagtgaagaag
aaattctctgccagccgcttctgggaagattgcattaagtacaactgcactgtggtgcag
tatattggggagatctgccgctacctcctgtctcagccagtacggccgtcagaaaaagga
cacaaagttcggctggcggtgggaaacgggctgcgccccagtgtgtgggaggccttcaca
gagcgttttggggtggcacagattggcgagttctatggagcaacagagtgcaactgcagc
atcgccaacatggatggcaaggtgggagcctgcggattcaacagtcgcattctccccaat
atttacccaatccgtctggtgagggtggacgaagacagcatggagctggttcgagacagc
cgggggctctgtgtgacatgccgccctggggagccagggcttctggtgggtcgtatcaac
cagcaggatccattacggcgttttgatggctacgctaaccaggacgctactaaaaagaag
atagctcacaatgtcttcaagaaaaatgattctgcatatttatcaggtgacgtgctggtg
atggatgaatttggctacatgtacttccgtgaccgtggtggtgacacgttccgctggcga
ggagaaaatgtctccaccacagaggtagagggcgtcctcagcagtcttctgtgtcagact
gatgtggcagtgtatggagtgacagtgccaggtgtggaaggtaaggccggcatggctgcc
attgcagacacaacaggaacttttgactgcaacagcttcctgcagaaagtccagcatgct
cttccttcgtatgctcgccccgtgttcctgcgaatttcaccacaggtggacaccacaggt
acattcaagatccagaaaaccaggctgcagagggagggatacgacccgcgtcgcaacact
gaccagatctactttttaaacactagagcctcgtgttacgaggctgtagatgaggagcta
tacaatgctatagccgagggaagaatgtctctatga
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