Trematomus bernacchii (emerald rockcod): 117493399
Help
Entry
117493399 CDS
T09643
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00310
Lysine degradation
tben00514
Other types of O-glycan biosynthesis
tben01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117493399 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
117493399 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tben01003
]
117493399 (colgalt1a)
Enzymes [BR:
tben01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
117493399 (colgalt1a)
Glycosyltransferases [BR:
tben01003
]
O-Glycan biosynthesis
O-linked Gal type
117493399 (colgalt1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
117493399
NCBI-ProteinID:
XP_033999828
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MPGLAWLPAAVLLLLSGCSPARGYFAEERWSPESELLAPRVLVALICRNSEHSLPYFLGN
IERLNYPKDRMALWVATDHNKDNTTVILRDWLVKMQNLYHYVEWRPKEEPQGYRDEDGPK
QWTDLRYEHVMKLRQAALVSAREMWADYFMLADCDNLLTNPDMLWKLMGENKTIIAPMLE
SRAAYSNFWCAMTSQGYYKRTPAYLPIRKHVRKGCFAVPMVHSTFLIDLRKEASRQLVFH
PPHPEYSWAFDDIIVFAFSARMADVQMFVCNKENYGNLPVPLRSHNTLQDEADSFLHSLL
EVNVRNPPVMPSKYVPVPTKQPDKLGFDEVFMINLLRRTDRRERMMSTLYEQKITCKVIA
AVDGKGMNISEVHNLGIHMLPGYNDPYHNRPLTKGELGCFLSHYNIWKEIVERRLETSLV
IEDDLRFEIFFKRRLMNLMKEVEDEGLDWDLIYIGRKRMQVDRPEKAVPNIHNLVEADYS
YWTLGYMISLQGAEKLLKAEPLKRILPVDEFLPIMFNKHPVFDYMKQFETRDLKAFSAEP
LLVYPTHYTGDRGYVSDTETSTVWDNDKVRTDWDRGRTGKTGEQAEISTEAQNSDVLQSP
LDSAAREEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgccggggctcgcctggctccccgccgccgtgctcctgctgctgtccggctgctctccg
gctcgcggatacttcgcagaggagcgctggagccccgagtctgagctcctcgcgccacgg
gtcctcgtcgccctcatctgcaggaactccgagcactctctgccgtatttcctcggtaat
attgagcgccttaactatcccaaggaccgtatggctttgtgggtggcaactgatcataac
aaggacaacaccaccgtcattctgcgggactggcttgtgaagatgcagaacctttaccat
tatgtggagtggaggccaaaagaggaaccccaaggttatcgtgatgaggatggtccgaaa
caatggacagacctccgttatgagcatgttatgaaacttcggcaagcagcgctggtgtcg
gctcgtgagatgtgggcagactacttcatgctggcagactgtgataacctcctcaccaat
cctgacatgctctggaagctcatgggagagaacaagaccatcattgctccaatgctcgaa
tcccgtgcagcctattcaaacttctggtgtgcaatgacctcccagggttactataagcgc
actcctgcatacttacccataagaaagcatgtgcgcaagggctgttttgcagttccaatg
gtccactccaccttcctgatagacctcagaaaagaggcatccaggcagctggtctttcac
ccgccacacccagaatacagttgggcttttgacgacatcattgtgtttgcgttctccgct
cggatggcagatgttcaaatgtttgtgtgtaacaaagagaactatggtaacctccctgtg
cctctgcgatcccacaatactttgcaagacgaagctgacagcttcttgcactccctgctg
gaggttaatgtgcgaaatcccccagtgatgccttccaaatacgtacctgttcctacaaaa
caacctgacaaactgggcttcgatgaggtgttcatgatcaacctgctgaggcgcactgac
cgccgagaacgtatgatgagtacgttatatgagcagaagataacatgcaaggtcattgca
gctgttgatggaaaagggatgaatatcagtgaagttcataatttaggcatccacatgctc
cctggatacaatgacccctaccataaccgcccactgacaaagggagagctgggttgcttc
ctatcccactacaacatctggaaagagattgtggagcgacgactggaaacctccctggtg
attgaagatgacctgcgctttgagatcttcttcaaacggcgcttgatgaacttgatgaag
gaggtggaggatgaagggctggactgggatctcatttatattggtcggaaaagaatgcag
gtggatcgcccagagaaagcagtgcctaatattcacaacttagtggaagcagattattca
tattggactctaggctatatgatttcattacaaggggcggagaagcttttgaaagcagaa
cccctgaagcggattttgccagtggacgagtttctgcccatcatgttcaataaacaccct
gtgtttgattatatgaaacagtttgaaaccagggacctaaaagcattttctgccgagcct
cttctagtgtatccaacacattacacaggcgacagaggctacgtcagcgacaccgagacc
tccacagtgtgggacaatgacaaggtccgtacagactgggacagagggcgcacaggaaag
actggggagcaggctgagatcagcactgaggcccagaactcagatgtgctccagtcgcct
ttggacagtgcggcacgggaggagctatga
DBGET
integrated database retrieval system
