Trematomus bernacchii (emerald rockcod): 117493445
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Entry
117493445 CDS
T09643
Symbol
socs1a
Name
(RefSeq) suppressor of cytokine signaling 1a
KO
K04694
suppressor of cytokine signaling 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04120
Ubiquitin mediated proteolysis
tben04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117493445 (socs1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117493445 (socs1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tben04121
]
117493445 (socs1a)
Ubiquitin system [BR:
tben04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
117493445 (socs1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2
SOCS_box
SH2_1
Motif
Other DBs
NCBI-GeneID:
117493445
NCBI-ProteinID:
XP_033999894
LinkDB
All DBs
Position
Unknown
AA seq
230 aa
AA seq
DB search
MVANSTVEGLDKTRLSSSSSSSSSTSSCSSSSSLSLPLARHELSLSPQRTESELQRRDDP
SPRSVSVPSVYRTHFPTFSCKEDCKIITDTAAKLEHSAFYWGPLGVEDAHRMLRDAPLGS
FLIRDSRQKDVFFTLSYHGSSGPVSVRIDYKHRKFSLAGNERSFPSLFALLEHYINSPKK
SLSVPYRKWKPTLQELCRKRIMELCGVGQVSELPLTHVVQGFLMEFPYKL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggtagccaacagcacagtggaaggccttgacaagaccaggttgtctagctcatcctca
tcgtcatcgtcaacctcatcctgttcttcatcatcgtccctgtcattaccgctggctagg
cacgagctctctctcagccctcagcgaacagaatcagaacttcagcgtcgggacgatccc
agcccaaggtcggtgtcggtcccctcggtgtaccgcacacacttccccacattctcttgt
aaggaagactgcaagatcattacggacacagcagccaagctcgaacacagcgccttctac
tggggccctctgggagtggaggacgcccatcgcatgctgagggacgctcctctgggaagc
ttcctcatccgtgacagccggcagaaagacgtcttcttcacgctgtcctaccacggcagc
agcgggccggtcagcgtgcgcatcgactacaagcatcggaagttctcactggcgggcaac
gagcgctccttcccgtcgctcttcgccctcttggagcattacataaattcccccaagaag
agcctgagcgtcccgtacaggaaatggaagccgacgctgcaggagctgtgcaggaagcgc
atcatggagctgtgtggggtgggccaggtgtccgagctgccactcacacatgttgtccaa
ggcttcctcatggaattcccttacaaactgtga
DBGET
integrated database retrieval system
