Trematomus bernacchii (emerald rockcod): 117493488
Help
Entry
117493488 CDS
T09643
Symbol
rangap1a
Name
(RefSeq) ran GTPase-activating protein 1a isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117493488 (rangap1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117493488 (rangap1a)
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117493488 (rangap1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_4
LRR_8
CPSF100_C
SDA1_dom
BUD22
PI3K_1B_p101
Motif
Other DBs
NCBI-GeneID:
117493488
NCBI-ProteinID:
XP_033999951
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MATDIVAQLAESLAKTGVEDGELSYKGQGRKLDDAQSVEEIVKEIQDFEDLEALRLEGNT
IGVAAAQAIAKALETKSKFKRCYWSDMFTGRLRSEIPPALNSLGDALMLANARLTVLDLS
DNAFGPDGVKGIERLLKSTACYTLQELRLNNCGMGIGGGKILAAALIQCYKTSSAEGTPL
GLKAFVAGRNRLENEGATALAQAFKLMGSLEEINVPQNGINHPGVTAMAGAVQNNPNLRI
LNLNDNTFTEKGAIAMAQALKHLRSIQVINFGDCLVRPAGAIAIAETVSEGLPILKELNL
SFGEITEEAALAVAHAVKNKDQLEKLDLNGNCLGEDGCKVLKDAMEGMNIADILGSLSDD
DGEPEDDEEEDDDDEEEDEDDEDVDDEEIEEEEEEEEEDDDSNGIKLSTPASAPRPPDVS
SFLSFPSPDKLLKLGAKRALLIEQQVDVSDASKTAEAFLKIASVYKEENNDVKIAVLDSI
DALLKKAFATPSFQGYSFVSSLLVLLGLLKSEDKVKPVLVVPGHLHTLEHVVRQDYFPKE
NVAVLEAFLSRNNNVLESCGNARDDLQSTLQRVRSEG
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagacattgttgcgcagttggccgaatctctggctaaaactggagtagaagat
ggagagctgagctacaaaggccagggaagaaagctggacgatgcccaatcagtggaggag
atcgtcaaggagatccaggactttgaggacttggaggctctgaggttggagggaaacact
atcggtgtagcggcagctcaggccatcgccaaggccctcgagacaaagagcaagttcaag
cgctgttattggagtgacatgttcacaggtcgcctgcgctctgagatcccaccggccctg
aattctctgggtgacgctctgatgctggcaaacgcccggctgacggttttagacctcagt
gacaacgccttcggtccagacggggtgaagggcatcgagaggctgctgaagagcaccgcc
tgctacaccctgcaggagctgcggctcaacaactgtggcatgggcatcggagggggaaag
atcttggctgccgcgttgatccagtgctataagacgtccagtgcagagggcacccccctc
ggcctgaaggccttcgtggcagggaggaaccgcctggagaacgaaggagccaccgctctc
gctcaagccttcaagctgatgggcagcctggaggagatcaacgtgccgcagaacggtatc
aatcacccgggcgtcacggcgatggctggagccgtgcagaacaaccccaacctgcgcatc
ctcaacctcaacgacaacaccttcactgagaagggggccatcgccatggcacaggctctg
aaacatctccgcagcatccaggtgataaactttggagactgtctggtgcggccggcagga
gccatcgccatcgcagaaactgtatcagagggactaccaatactaaaggaactcaatctg
tcgtttggtgagatcacagaggaagccgctctggctgtggcacacgccgtaaagaacaag
gatcagctggagaaactggacctcaacggtaattgtctcggagaggacggctgcaaagtt
ctgaaagacgccatggagggcatgaacatcgccgatatcctcggatcgctcagtgacgat
gatggtgagccggaggatgatgaggaagaagatgatgatgatgaggaagaagacgaagat
gacgaggatgtggatgacgaggaaatagaggaggaagaggaggaagaagaggaggacgat
gatagcaatggcatcaagttgtccacccctgcctcagccccccggcctccagacgtctcc
tccttcctcagcttcccgtctccagacaaactgctcaaactgggagccaagagagcgctg
ctgatcgagcagcaggtggatgtatctgatgcttcaaaaacagctgaagctttcctaaag
atcgcatctgtgtataaggaggagaataatgatgttaagattgccgtgttggacagcatc
gatgcccttctgaagaaagcttttgccactccgtccttccaaggctacagcttcgtatcg
tctctgttggtgctgctcggacttctcaagagtgaggacaaggtgaagccggtgctcgtg
gttcccggtcacctccacactttagagcacgtggttcggcaggactacttccccaaggag
aacgtggcggtgctggaggccttcttgtcccgaaacaacaatgttctggagtcatgcgga
aacgccagagacgacctccagtcaacactgcagagagtcaggtctgagggctga
DBGET
integrated database retrieval system
