Trematomus bernacchii (emerald rockcod): 117493540
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Entry
117493540 CDS
T09643
Name
(RefSeq) protein SOGA3-like isoform X1
KO
K27704
microtubule cross-linking factor
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117493540
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
117493540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOGA
YabA
APG6_N
ATG16
TSC22
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
117493540
NCBI-ProteinID:
XP_034000052
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MKSAAGGAAAAPSPSSSDNSARRRRGRRQHRDPSPATAQEGATKRARRHPARPGSPLPAG
SSRNTGARESLRSADGREREPERRGGAAVHPDGAEADVVRANRADAVGEAPTDSSASARR
SVLPLPCLKGDSSRPLLPSRGSFSFPAVVREGTPGEEGGRSRERSGASAGCGLASLGLWR
GGCLQAELIQFHLQKRLRRSGAKMQTKTENMGPEEAAEGEPGPAAEETEAGSVTQQDQAL
EDEVERLLDENDDLKCEIEEMRAEMDEMRDTFYEEDTCQLQEMRRELERANKNCRILQYR
LRKAERKKLRYAQTGEIDEELLRSLEQDLKVAKDVSVRLHHELEKVEEKRTKTEDENEKL
RQKLIEVEVTKQALQNELDKTKEKRRGSKDIQKTDRKPSQTPTEEVNEDLKCQLAFIKEE
AVLMRKKTAKIDKEKDRLEQELQRYRSFYGELDSTHHKGEAGGPPTTRESELKLRLRLVE
EEANILGRKIVELEVENRGLRAELDDIRGEGEGAGSSEGGAMGGSGSGRGLGDDLTELRQ
QLQLVEDEAELLRRNLADVEDQNKRVTTELNKLRFKAGTHEGGSRHGGGLDGAKAEALQE
ELKAARLQINDLSGKVMQLQYENRVLLSNMQRYDLASHLSLRPSPRDSDAESDAGGATSG
RRESDEDSSSRLVPPHRKREGPVGGESDPDEVRNTNGSSRCLTPTRGLYTPTGPEGAASS
PLARFLPVGRCSLLERQHMTDIRMEAERLVRTIDRLIADTATIISEARVFVTNGDLMFRR
GGEEGGEEDGSRIREHELLYRINAQMKAFRKELQTFIDRLEVPRPEGRETEEPLSMFQPI
ILLILILVLFSSLSYATIFKLVFLFTLFFVL
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctgccgccggcggcgctgcagctgctccatcaccgtcatcatcagacaatagc
gcaaggaggaggagggggcggaggcagcaccgggatccctcgccggctacagcccaggaa
ggggcaaccaagcgagctcggagacacccagccaggcccggatctcctcttcccgctgga
agtagcagaaacaccggggcgagggagagtttgaggtccgctgacggaagggagagggag
ccagagaggcgcggcggagcagctgttcacccggatggtgctgaagctgatgtagtcaga
gcaaacagggcggatgctgtcggggaagctccgacagattcatcagcatcggcccgtcgc
tctgttttacccctgccctgcctcaaaggtgattcctcccggcctttgttgcccagcaga
ggctcgttttccttccccgcggtggtgagagaggggacacccggagaggaaggcggcagg
agccgggagagaagcggcgcgtctgcgggctgcggcctcgcctcgttgggtctgtggaga
ggaggatgcttgcaggctgaactcatccagttccatctgcagaagagactaagaagaagc
ggggcgaagatgcaaaccaagaccgagaacatggggccagaggaggccgcagagggagag
ccggggccggctgcagaggagacagaggcggggtccgtgacacagcaggaccaggccttg
gaggacgaggtggagaggctgcttgacgaaaatgatgatcttaagtgtgaaattgaggaa
atgagggccgagatggacgagatgcgagacacattctacgaggaggacacgtgtcagctg
caggagatgagacgtgagctggagagggccaataaaaactgccggatcctgcagtaccgt
ctgaggaaggcggaaaggaagaagctgcgctacgctcagacgggagagatcgacgaggag
ctgctcaggagtctggagcaggacctgaaggtagcgaaggatgtgtctgtgaggctgcac
catgagctggaaaaggtggaggagaaacgcacaaagaccgaggatgagaatgagaaactg
agacagaaactcatagaggtggaagtgaccaaacaagccctgcagaatgaactggacaaa
accaaagagaagagaagaggaagcaaggacatccagaagactgacaggaaaccatcacaa
actcctaccgaggaggtcaatgaggaccttaagtgccagctagcttttatcaaagaagaa
gcagtgcttatgaggaagaaaaccgccaagattgacaaagagaaggaccgtctagagcaa
gagctgcagaggtaccgctccttctatggcgaactggacagcacccatcataaaggagag
gctgggggtccgcccaccacccgtgagtcagagctcaagttacggctacgcctggtggag
gaggaggccaacattctggggaggaaaatagtggagttggaggttgaaaaccgtgggctg
agggccgagctcgacgacatccgtggggaaggagagggcgcaggaagctctgagggcgga
gcgatgggtgggtctggctcagggcgaggccttggagatgacctgacggagctccgacag
cagctgcagctggtggaggacgaggcagagctgctgaggaggaacctggccgatgttgaa
gatcaaaacaagagagtgaccactgagctgaacaagttacggttcaaagccggaacccat
gagggaggcagcaggcacgggggaggcctcgatggagcaaaggcggaagccctgcaggag
gagttaaaggcagcaaggctacagattaatgacctaagtggcaaggtgatgcagttgcag
tacgagaaccgtgtgctcctatctaacatgcaacgctatgacttggcctcccacctctcc
ctgcggcccagcccgcgggacagcgacgcagagagcgatgcgggcggagccacaagtggt
cgccgtgagagcgatgaggactcctcctcgcgcctcgtcccaccccaccgcaaacgcgag
ggccctgtaggtggggagagtgacccagacgaggtcagaaacactaacggaagcagccgc
tgcctgacgcccacaaggggcctctacacccccaccgggcctgagggtgccgcctcctcc
cccttggcccgcttcctgcctgttggccggtgcagcctgctcgaaaggcaacacatgact
gacatccgcatggaggctgagaggcttgttcggaccattgaccggctcatcgctgatacg
gccacgatcatctcagaggcgagggtatttgtgacaaacggtgacctgatgttcaggaga
ggaggggaggagggcggagaggaagatggcagccggatcagggaacacgagcttctgtat
cgtattaacgcccagatgaaagccttccggaaagaactgcagacgtttatagacagactg
gaagtgcctcgacccgagggcagggagacagaggaaccactgtcgatgttccagcctata
attttgctcatcctcatacttgtgttattctcgtccctctcttacgccaccatctttaaa
ctagtctttctttttactcttttctttgttctgtga
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