Trematomus bernacchii (emerald rockcod): 117493753
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Entry
117493753 CDS
T09643
Symbol
rbm25a
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117493753 (rbm25a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117493753 (rbm25a)
Spliceosome [BR:
tben03041
]
Complex A
U1 snRNP components
U1 related factors
117493753 (rbm25a)
Complex B
117493753 (rbm25a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
117493753
NCBI-ProteinID:
XP_034000226
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MSYPPPMNRQQIGIPQLPPRIPPPQYAGFAQTVPPGTPMIPVHMGVLTPTPSVLIPTSVS
ITHKPMLIKKDPIIRASDDNGGPTTTVFVGNISEKASDMLVRQLLAKCGIVLSWKRVQGA
SGKLQAFGFCEYKEPESTLRALRLLHELMLGDKKLLVKVDAKTKSQLEEWKAKKRSANGG
AGVGSKNGDDDDDDEEVLDEETLHRDQVVKGAIEILTREYASELNAPSQDPDNQPRNKKR
KEKKEEKEDINAMEMEDDKRDLISREISKFRDTHKKLEEEKGKKEKERMEIDKERRERDK
ERERERERRDREKEKERERERDKERERDRDRERERDRERERTKERERTRERERSRDVSEG
RSRSRERTREDKKRDREEDEEDVYERRRLERRLRDKEAAYQERLKNWEIRERKKARDYSK
ETEREDERRREMMKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKETELDERDRK
REKEEHEEIRQRLLAEGHPDPEAELQRMEEEAERRRQPPLKLELEEDIVHREKSHRDRDR
DREKRSSGRREEEPIPRAPPQQQQQQQQQQQQQQQSDDDDEEEAAMEEDFPDAEDSQEAE
EPPQIKPVMRPITTAPSVSSGSGDATPNSPGNESPCGIIIPGENSPEVQPPEELRPKIGL
SLKLGASNSPSQLNVGKRKKLATVESVFNKFDEEEADEQPRKRKLVPLDYGDDDKSLGLD
GAEMPGPKGGVNTEEKRKHIKSLIEKIPTARPELFSYPLDWAMVDSSLMDRRIKPWINKK
IIEYIGEEEATLVEFVCSKVMAHSTPQGILDDVAMVLDEEAEVFIVKMWRLLIYETEAKK
IGLAK
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgtcataccctcctcccatgaaccgccagcagatcggcatcccgcagttacccccccgg
atcccccctcctcagtatgcggggtttgcacagactgtccccccaggtactcccatgatc
ccggttcatatgggcgttttgacccccacaccctcagttctcatcccgacctcagtgtct
ataacccataagccgatgctcataaagaaggacccgatcatcagagcctcggacgacaac
ggcggcccgaccaccaccgtgttcgtggggaacatctctgaaaaggcttctgacatgttg
gtcagacagctgcttgcgaaatgtggtattgttctgagctggaaaagggtgcaaggtgcc
tctgggaaacttcaagcgtttgggttctgtgagtacaaggagccggagtccacgctgcga
gcgctcagacttcttcacgagctgatgttaggagacaagaagctgctcgtgaaggtcgac
gccaagaccaagagccagctggaggagtggaaggccaagaagaggagcgccaacgggggc
gcaggtgttgggtcaaagaacggggacgacgatgacgatgacgaggaggtcctggatgaa
gagactctgcaccgggaccaggtggtgaagggagcaatagaaatcctgacccgagagtac
gccagcgagctgaacgctccgtcacaggaccccgacaaccagccgcgcaacaagaagagg
aaggagaagaaggaggagaaggaggatatcaacgccatggagatggaggacgacaagaga
gacctgatatccagagagatcagtaaattcagagacacacacaagaagctggaggaggaa
aaaggaaagaaggagaaggagcgaatggagatcgataaggagaggagggagagggacaaa
gagcgggagagagagagggagcgccgggaccgcgagaaggagaaggagagggagagggag
agagacaaggagcgagagagagaccgggaccgcgagagagagagagatcgtgagcgagag
aggacgaaggagagggagaggacgagggagagagagaggagtcgagacgtcagcgagggg
cggagcagatccagagagaggactcgagaagacaagaaacgagaccgtgaagaagacgag
gaggacgtttacgagcggaggagactggagaggaggctccgagacaaggaggccgcttac
caagaacgcctgaaaaactgggagatccgggagaggaagaaggctcgcgactacagcaaa
gagacggagcgcgaggacgagaggcgtcgggaaatgatgaaagaagccaaaaggctgaaa
gagttccttgaagattacgacgacgacagagacgaccctaaatactacaggggcagcgct
ctgcagaagagactccgtgacagagaaaaggagacagagctggacgagagagacaggaag
agagagaaggaggagcatgaggagatcagacagaggctgctggctgaaggtcaccccgac
cctgaggctgagctgcagaggatggaggaggaggccgagcgcagacggcagccgcctctc
aaactcgaactggaggaggacatcgttcaccgggagaaatctcaccgtgaccgtgatcgt
gaccgggagaagagaagctctggaagaagagaagaagagccgattccccgtgcccccccg
cagcagcagcagcagcagcagcagcagcagcagcagcagcagcagtcggacgatgatgat
gaagaggaggcggcgatggaggaagacttccccgacgctgaagactcacaggaggccgaa
gaaccgccgcagattaaacccgtcatgaggcccatcaccacggctccctctgtgtcctct
ggcagcggggacgccacccccaactcgcccggcaacgagtccccctgcggcatcatcatc
ccgggggaaaactctccggaggtgcagccccccgaggagctgcggcccaagataggcctc
agtctcaaactgggcgcctccaacagccccagccagctgaacgtaggcaagcggaagaag
ctggcgacggtggaaagtgttttcaacaagtttgacgaggaggaggcggacgagcagccg
cgcaaaaggaaactggttcctctggattacggagacgacgacaagagcctcgggctggac
ggggccgagatgccggggcccaaaggcggcgtcaacacggaggagaaacggaaacacatc
aagagcctcatcgagaaaatccccaccgccagaccggagctgttctcctacccgctggac
tgggccatggtcgactcgtctctgatggatcgccgcattaaaccgtggatcaataaaaag
attattgaatacatcggagaggaggaggcgacgctggtggagtttgtctgctcaaaggtg
atggcacacagcacccctcagggaattcttgatgatgttgcaatggttctggatgaagag
gcagaagtgttcatagtgaaaatgtggaggctgttgatttacgaaacagaggcgaagaag
atcggactcgcgaaataa
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