Trematomus bernacchii (emerald rockcod): 117493834
Help
Entry
117493834 CDS
T09643
Name
(RefSeq) synaptosomal-associated protein 23-like isoform X1
KO
K08508
synaptosomal-associated protein 23
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117493834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tben04131
]
117493834
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117493834
Membrane trafficking [BR:
tben04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-23
117493834
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117493834
Exosomal proteins of other body fluids (saliva and urine)
117493834
Exosomal proteins of colorectal cancer cells
117493834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNAP-25
DUF5089
V-SNARE_C
COG6_N
Sas-6_C_CC
Sec20
Sec3_CC
DUF3450
Motif
Other DBs
NCBI-GeneID:
117493834
NCBI-ProteinID:
XP_034000296
LinkDB
All DBs
Position
Unknown
AA seq
236 aa
AA seq
DB search
MNGPQNIELGATGGTSKMDKGKMEDMTVEQIATRSNQVTDESLESTRRMLQMAEESKQTG
TNTLVMLDQQGEQLRRVDEGMDQINQDMRQAEKNLTDLSKCCGMCVCPCDRVSSIEKDSK
YKRTWGLRGTDNENDSNGGKVVSRQPSGVRNGQVQANASAPSGPYIKRITNDAREDEMEE
NLDTVGSILGNLKNMAQDMGNEIDSQNKHIDGINDKADMNKFRIDEANQRANKLIK
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggccgcagaatatcgagctcggagcaacggggggaacctccaaaatggacaag
ggcaaaatggaagacatgactgtggagcagatcgccacaaggtccaaccaagtgactgac
gagtcgctggagagcactcgcaggatgctgcagatggcggaggagagcaaacagaccggc
accaacaccctcgtgatgttggaccagcaaggagagcagctgaggcgtgtggacgagggc
atggaccaaatcaaccaggacatgaggcaggcggagaaaaacctgaccgacctctccaag
tgctgcggcatgtgcgtgtgtccctgtgacagggtgtcgtctatcgagaaggactcaaag
tacaagcgcacatggggtctcagaggaaccgacaacgagaatgactccaacggaggaaaa
gtggtctccaggcagccgtcgggcgtccgcaacgggcaggtccaggccaacgcctcggcc
ccctcaggcccctacatcaagaggataaccaatgatgctcgtgaggatgagatggaagag
aatctggacacggtcggcagcatccttggcaacctgaaaaacatggctcaggacatgggc
aacgagatagacagtcagaacaaacacatcgacggcatcaacgacaaggcggacatgaac
aagtttcgtatcgatgaagcgaaccagagagccaacaagctcatcaagtag
DBGET
integrated database retrieval system
