Trematomus bernacchii (emerald rockcod): 117493836
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Entry
117493836 CDS
T09643
Symbol
optc
Name
(RefSeq) opticin
KO
K08127
epiphycan
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tben00535
]
117493836 (optc)
Proteoglycans [BR:
tben00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
117493836 (optc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
117493836
NCBI-ProteinID:
XP_034000304
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MSLMMALVLAVVFMGPSPNMAAPTGVTDDEAFDLENYSLNSEMDWENLDVNIYGDSYDYD
DLDQEIEVGTVAPDPPSAASLPTVEYHEEELTLPPAPVTLDFKGPGLFGPDTGLGMPTCL
LCVCIGGSVYCDDTGLDQIPLLPKDTTHFYGRFNNIRHVKNTDFNYLNQLQSIDLTGNQI
SGMDEDVFLSLPQLHQLLLADNNLQSMPELPITMKYIDLRNNRLISNGVHSEGFKDMSQL
EFLYLSDNKLDYIPVPLPLGLRVLHLQNNNIQTLYEDSFCNSHDRHFIRRNLEDIRLDGN
PLNIQLFPQAYVCLPRLPVGSH
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgatgatggcacttgtcttggccgtggtcttcatgggcccctcccctaacatg
gcagcccctacaggtgtgacagatgatgaagcttttgaccttgaaaactacagcctgaac
agtgagatggactgggagaacctagacgtcaacatctacggagacagttatgattatgat
gacttggaccaagagattgaggtgggcaccgtagctccagaccccccctctgcagcaagc
ttgcccacagttgagtaccatgaggaggagctgaccctgcccccagctcccgtcactctg
gacttcaagggaccgggtctctttggccctgatactggccttggtatgcccacctgcttg
ctgtgtgtgtgtattggtgggagtgtgtactgtgatgacacaggcctggatcagatccca
ctccttcctaaagacaccacccatttttatggccgcttcaacaacattcgacatgtcaag
aacacagactttaactacctcaatcaactccagtccattgatctgacagggaaccagatt
tcagggatggatgaggatgtgtttctgtctctgccgcagcttcaccagttgctgctggct
gataacaacctgcagagcatgcctgagctgccaatcaccatgaaatacatcgatctacgc
aacaacaggctgatcagtaatggggtacattctgagggattcaaggacatgagccagctg
gagttcctctatctgtctgacaataaactggattacattcctgtaccactaccactgggt
ctgagagttttacacctgcagaataacaacatccagactctgtacgaggactccttctgt
aacagccatgatcgccacttcatccgccgtaacctggaggatatccgcctggacggcaac
cccctaaacatccagctatttccccaggcctacgtctgcctgccccgcctgcctgtaggg
agccactga
DBGET
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