Trematomus bernacchii (emerald rockcod): 117493995
Help
Entry
117493995 CDS
T09643
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04110
Cell cycle
tben04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117493995 (smc1a)
04114 Oocyte meiosis
117493995 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117493995 (smc1a)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
117493995 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
117493995 (smc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
SlyX
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
117493995
NCBI-ProteinID:
XP_034000494
LinkDB
All DBs
Position
Unknown
AA seq
1230 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAYVSMVYQEDNGEERNFTRGIIGSSSEYRINSKVVGLPEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARASVQLQLFKLYHNETEIEKLNK
ELAQRNKEIDKDRKKMDNVEEELKDKKKELGRLMREQQTIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAARKSLQNAQKMYKKRKGDMDELDKEMQAVDSTKQEFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEGAKRRIDEINTELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALICDNVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTEELKDQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIHSREKEITDLQDRMNLVEDEVFIEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQVDYEKNQLKEDQEKVMMWEQ
TVKKDDAEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHDMEEIRKKLGG
ANKELTQLQKEVTAIETKQEQKRSDRHNLLQACKMQDIRLPLRSGTMDYMSQGEGSSQPE
ESNSQRTSSTVLAKEALIEIDYGILTEDLKDALSEEEFKGETNTLQQRLNEQQSILQRIS
APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERYDRFNNCFESVATNI
DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL
FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVHTQAIVISLKEEFYTKADSLIG
VYPEQGDCVISKVLTFDLSVYPDANPNPNE
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttaaaactgatcgagatcgagaactttaagtcgtataaaggaagacagatc
attggaccttttcataagttcacggctatcatcggacccaatggatctggaaagtccaac
cttatggatgccatcagcttcgtgttggcagagaagaccagcaacctgcgagtgaagact
ctgaaggatctgatccatggagcacctgtagggaagcctgctgcgaacagagcctatgtc
agtatggtgtaccaggaggataatggagaggagcgcaacttcacaaggggaatcattggt
tcctcctctgagtaccgaatcaacagcaaggtggtgggcctgcctgaatacagtgaagag
cttgagaaacttggcattctgatcaaggctaggaacttcctcgtctttcagggagctgtg
gagtctattgccatgaagaaccctaaggagcgaacagctctgtttgaggaaatctctcgg
tctggagagctggcccaggagtacgaccgcaggaagaaggaaatggtgaaagcagaggag
gacacgcagtttaattaccatcgtaagaaaaacattgctgctgagcgcaaagaagccaag
caagagaaagaggaggctgagcgttaccagcgtttgaaagacgaggtggccagggctagt
gttcagttgcagctctttaagctgtaccacaatgagactgagattgagaagctgaacaaa
gagctggcccagcgcaacaaggagatcgataaggaccgcaaaaagatggacaatgtggag
gaggagctgaaggacaagaagaaggagctgggccgactgatgagagagcagcagaccatt
gagaaagaaatcaaagaaaaagactccgagttgaaccaaaagaggccgcagtacatcaag
gcaaaagaaaacacctcacacaagatcaagaagcttgaggcagcacgcaagtctttgcaa
aatgcccagaagatgtacaagaaacgcaagggggacatggatgagctggacaaagagatg
caggcggtggactcgaccaagcaagagtttgaggagcggatggaggaggaggcgcagagc
cagggccaggatctcaccctggaggagaaccaggtcaagcagtaccatcgtctgaaggag
gaggccagtaagcgagctgccaccctggctcaggagctggagaagttcaaccgcgaccag
aaggccgaccaggaccgcctggacttggaggagaggaagaaagtagagacggaggctaaa
atcaaacaaaagatccgtgaaattgaggaaaaccagaaacgtattgagaaattagaggat
tatatcaccaccagcaggcagtcactggatgagcagaagcgcatggaggaggagctgacg
gaggaggtggagggtgccaaaaggagaattgatgagatcaacacagagcttaaccaggtg
atggagcagctgggagacgccagaatcgacagacaggagaacagtcgccagcagcgcaag
gcggagatcatggagagcatcaaaagactctaccctggctctgtgtatggtcgtcttatt
gacctgtgccagcccacccagaagaagtatcagattgctgtgactaaagtgttgggcaag
aacatggatgccatcatcgttgactcagagaagacgggcagagattgtattcaatacatc
aaggagcagagaggagagcccgagaccttccttcctctcgactacctggaggtgaaacct
acagatgagaagctgagagagcttcgaggagccaaactggtgattgatgtgatccgctat
gagcctccacacatcaagaaagccctgcagtatgcctgtggcaacgccctgatctgtgac
aacgtagaggatgcacgaaggatcgctttcggagggccatacagacacaagacggtagcc
ctcgatggaactctgttccagaagtctggagtcatctctggaggagccagcgacctgaag
gccaaggccaggcgctgggatgagaaggcagtcgacaagctcaaggagaagaaagaaaaa
ctcactgaagagctcaaggatcaaatgaaggccaagaggaaggaggcggagctgcgtcag
gtgcagtctcaggcccacggtctgcagatgagactcaagtactcccagagtgatctggaa
cagaccaaaacccgccacctctccctcaacatgcaggagaaatctaagctagagagtgag
ttggcaaactttggccctcgcatcaacgacatcaaaaggatcatccattcccgggagaag
gagatcaccgacctgcaagaccgcatgaacctggtggaggatgaggtgtttattgaattc
tgtaaggagattggagtgaggaacatcagagagtttgaggaggagaaggtgaagaggcag
aatgagattgcaaagaagcgtcttgagtttgagacccagaagacccgtctgggtatccag
gtagactacgaaaagaaccagctgaaggaggaccaggagaaagtcatgatgtgggagcag
actgtcaagaaagacgacgctgaaatagaacgactaaagaaggaggagcacagacacatg
aagatcattgatgagacaatggcccaactccaggacctgaagaaccagcacctcaccaag
aagtctgaagtcaacgataagaaccatgacatggaggagatccgcaaaaaactgggtggc
gccaacaaggagttgactcagctccagaaagaggtcacagccattgagaccaaacaagag
cagaagcgcagcgatcgtcacaacttactgcaagcctgcaaaatgcaggacatcaggttg
cctctgcgatcaggaacaatggattatatgagccagggagaggggagctcccagccagaa
gagtccaacagccagaggacgtccagcactgttctggctaaagaggctctcatagagatc
gactacggtatcctgactgaagaccttaaggatgcactgtcggaggaagagttcaagggc
gagaccaacacactgcagcagcgtctgaacgagcagcagagcatcctccagaggatcagt
gcacccaacatgaaggccatggagaagctggagagcgtccgggacaagttccaggagacc
agtgatgagtttgaggctgctcgtaagagagccaagaaagccaagcaagcctttgagcag
attaagaaggagaggtatgaccgcttcaataactgctttgagtctgtcgccaccaacatc
gatgagatctacaaggccctctcacgcaacagcagtgcccaggctttcctgggcccagaa
aacccagaggagccatacctggacggcattaactataactgtgtggcccctggaaagagg
ttcaggcccatggacaatctgtctggaggagagaagactgtcgctgccctggctctgctc
tttgctattcacagctacaaacccgcgcccttctttgtcctggatgagattgacgctgct
ctggataacactaacattggcaaggtggccaattatattaaagaccagtcggtgcacacg
caggccatcgtcatttctctgaaagaggagttctacaccaaggcggactcactcatcggt
gtttatccagagcaaggagattgtgtcatcagcaaagtgctgacctttgacctctccgtg
tatcctgacgccaaccccaatcccaatgaatag
DBGET
integrated database retrieval system
