Trematomus bernacchii (emerald rockcod): 117494110
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Entry
117494110 CDS
T09643
Symbol
bpifcl
Name
(RefSeq) lipopolysaccharide-binding protein
KO
K05399
lipopolysaccharide-binding protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117494110 (bpifcl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117494110 (bpifcl)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
117494110 (bpifcl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LBP_BPI_CETP_C
LBP_BPI_CETP
Flp_N
Motif
Other DBs
NCBI-GeneID:
117494110
NCBI-ProteinID:
XP_034000697
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MLPAVIVVLMLISFTCGENPAIQVILTSKGLQYGKHIGAGWVQEKLEHNTVPDFSGEVFG
IHYILTGITITKCDFPEPIVEFNPDNTGFTTSISGLSVALTGGWMTHFGLIHDRGSFNMA
IFGLDVTSVVGLGKDPDGHLSVTSVSCDAQVGELDIQFEGGASWIFQPFVEHFKGRMRGE
IRSKICPDVEESIVSLEYHLQAMEDLSIQVDEDLVLYIPLTGVPVITASSMILGLKGEFY
DMKTHEWPPFEAQNFTVPEQPDYMLSMGLSEFTMNSASYALYSGKRLQFLITDSMIPPYI
HVRLNTSSMGPYVPQLPKMFPGLLMNLQVYASEVPMFSFQPGVVKLNLAGIVKASAIEPN
ATKIPLFKLNVDLKFDGKVWVAAGRLKGSMALQNLTLTLAGSEVGHFETDTLESLVKMGV
MAGLAKLNVELGKGVVLPRMRNAQLVNTVLAVEEGFIAMCSDAEVFTDSFN
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcttccagcagtgattgtggtgctgatgctcatttcttttacctgtggtgaaaaccct
gccatacaagtcatcctgactagcaaaggacttcagtacggaaagcatataggtgcagga
tgggttcaggagaagctggagcataacactgtccctgacttcagtggtgaagtctttggc
atacactacattctaacaggcatcaccataacaaagtgtgactttccagagccgattgtt
gagttcaatccggacaacacaggattcaccacatccatctcaggcctcagtgtggcactg
actggcggctggatgacacactttggtctaatccatgacagaggatccttcaacatggct
atctttggtttggatgtgacctcggtggtggggctggggaaagatcctgacgggcatctg
tccgtcaccagcgtcagctgtgatgctcaggttggagagctggacattcaatttgaaggt
ggagcgagttggatcttccagccttttgtggagcatttcaaggggcggatgaggggtgaa
ataaggagcaaaatctgccctgatgtggaggaatccattgtgagcttggagtaccacctg
caggccatggaagacttgtccattcaagtggatgaagacttagtactctacatccctctg
actggcgtacccgtcattactgcatcaagtatgattctgggtcttaagggagagttctac
gatatgaaaactcatgaatggcctccctttgaggcccagaatttcactgtgcctgagcag
cccgactacatgctgtcgatgggcctgtctgaattcaccatgaactccgcctcatacgca
ctctactctgggaaacggcttcagtttctcattactgacagcatgatacctccttacatc
catgtacgcctcaacaccagctcaatggggccttacgttcctcagcttcctaagatgttt
cctggtcttctgatgaatctgcaggtttatgccagtgaggtgccgatgttttccttccag
cctggtgttgtgaaactcaaccttgcgggcatagtgaaggcttctgccatcgagcccaat
gccaccaagatccctctgttcaaactcaatgttgacttaaaatttgacggtaaagtgtgg
gtcgctgctggaagactgaagggctccatggcactgcagaatttaacactgacgctggcg
ggcagtgaagtgggacactttgagacagatacattggaaagcttagtgaaaatgggagtg
atggctggcctcgcaaaactgaacgtggaactgggcaaaggcgttgttttacccagaatg
aggaacgctcagctggtcaacacagttctggcggtggaagagggatttatagccatgtgt
tcagacgctgaggtgtttacagacagcttcaactga
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