Trematomus bernacchii (emerald rockcod): 117494125
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Entry
117494125 CDS
T09643
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tben04515
]
117494125
Cell adhesion molecules [BR:
tben04515
]
Immunoglobulin superfamily
L1 family
117494125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_5
C2-set_2
C2-set_3
Ig_6
Motif
Other DBs
NCBI-GeneID:
117494125
NCBI-ProteinID:
XP_034000720
LinkDB
All DBs
Position
Unknown
AA seq
1320 aa
AA seq
DB search
MTQKPVLFHVPYKSQVTPVDPYQHVLLISAVSIHQWRVMRLVGSLQLVLLLAFTSTATGL
NIPLEVEQPPTIINSSSGPIIALPFDKSITIQCEARGNPPPEYRWTKDGKEFIPPHVTTN
RHHRVGTFVLHNKQVVEFRGKYRCYSSNKLGTAMTEEIELRVPNVPKFPKEVNSPLVVKE
GDPIILECNPPEGVAPIKIYWMSIGLEHIEQDERVSVGADGNLYFAYALLKDSRQDYCCF
ASFTKIRIIVQKTAMAVIVKSLKPGNESADSGEATAEPPPVRMSGLLLPSGVQTEKVLLR
GEHLKLECIPGGYPTPKVTWMKMGDKLPSRTTLNKHGKLLSISAVDESDAGKYMCKAQNS
AGEAVHYFDVIVEEPPKWLSEPPQSQLTVIGTDVHIKCSVSGKPSPDITWRRNGRLFKDD
PVNNRRVLDDTVVLHNAKTEDSAVYQCEASNSHGSVLANINIMVMNMAPLILTRDYQEYA
VVLGGDILLNCSVFSSPPSKISWARDDTLETIDGIRFFPLNESLQIISADKKDSGIYQCV
ASNSEGKSDITAVLDVKDPTHIVYPPQDVQVISGTTAQLMCQAEYDKSLQSTFEVVWRKD
GEEIPLLSEENSRYFADYGMLQIMSVNLSDQGAYTCVARTSLDGDNATALLTVLDVPDAP
KIVEISELQSPRNISLDWIPGSDHNSSVIEFIVEYEESQWEPGRWRELQKVPGNQATAEL
ALHGNLNYQFRVYAVNAVGPGPPSEPTERYKTPPAAPEKNPANIKIQGHSPNQMDISWEP
LLPIEHNGPGLEYRVRYRKLGVGDEWKLHMVNRHSFVVRNTSTFVPYEIEIQSRNSHGWG
PEPKIVTGYSGEDVPTAAPRDIAVEVINTTVLRVSWTPAPAATVRGHLGGHHVHWVRRRS
LLNPNKILDERQSLSFPGKRTHAIVPGLEPFSEYRLTVNVFNKKGNGPNSDPVTFNTPEG
APAQVPILTASNAQIDSILLVWGPPREANGILTGYLLQHHLINETTLEVVDSQETHITGA
DTTQWKLHGLEGGSLYRFLLSACTAAGCGPPLTQESSTVALEHLSPTPAGAPVQSIPALL
NVSSYVSDTFAKISWTAIEEQQDSELYVAYMNNSDGFWRISEAVNASQGFHVIDGLKPGT
VYTVRLMSKRLLDNASIFEDVIQTRLQGAVGQKSSFSTQGWFIGTMCAVALLTLVVLMAC
FVRRNRGGKYAGTPPPTQRQEMFSMEKVKEKEDLHPDPESQGLNEDSFGDCSDSEEKPLK
GSSVCSLNGAMGDGVSRDSMVDYADGGREFNEDGSFIGEYSDRRQGGSVSEPSGPRPVTA
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgactcagaaaccagtcctcttccatgtgccttacaaatcccaagtgacgccagttgat
ccatatcaacacgttctcctgatctcggctgtctccatccaccagtggagggtgatgagg
ctggtggggagcctgcagcttgttctgcttttggccttcacctccacagccacaggcctc
aacatccctctggaagtggagcagccaccaaccataattaatagctcatctggtcccatt
attgcacttccttttgacaagtccattaccatccagtgtgaagccaggggcaacccacca
ccagaatacagatggaccaaagatggcaaagaattcatccctccccacgtcacgacaaac
agacatcaccgagttggtaccttcgtgcttcacaacaagcaggttgtcgagtttcgtggt
aaataccgatgctactcttctaacaagttgggaactgccatgacggaggagattgaacta
agagttcccaatgtgcccaagtttccaaaggaggtcaattcccccctcgttgttaaggag
ggagatccaatcatcctggagtgtaaccctccagaaggagtagccccaattaagatctac
tggatgtctattggtctcgagcacattgagcaggatgagagggtttctgtgggcgctgat
ggcaacctgtacttcgcttatgccttactgaaagacagtcgtcaggactactgttgcttt
gcctccttcaccaaaatacgcatcatcgtccagaaaaccgccatggctgtcattgtcaag
agcttgaaacctggcaatgaatctgctgacagcggggaagccacagctgaacccccccct
gtgaggatgtccggcctgctgctgccctctggtgttcagacagagaaggtgctgctgagg
ggagagcatctgaagctggagtgtattcctggtggatatccgaccccgaaggtaacatgg
atgaaaatgggagacaagctgccttcacggacaacattgaacaaacatggaaagctgttg
tccatttccgctgtagatgagagtgacgctgggaaatacatgtgtaaagcccagaactct
gctggagaggctgtccactactttgatgtaatagtggaagagccgccaaagtggctgtca
gagcctcctcagagccagctgaccgtgatcgggactgatgttcacatcaagtgctcggtc
agtggaaaaccatcgccggacattacatggaggaggaatggacgactgttcaaagatgac
ccagtgaacaacaggcgagtgctcgatgacaccgtggtgctccacaacgccaaaacagag
gacagcgccgtctaccagtgtgaggcctccaacagccacggcagtgttctggccaacatt
aacatcatggtcatgaatatggctcctttgatactgacaagggactaccaagagtacgct
gtagtattaggaggggacatcctcctgaactgcagtgttttcagctctccgccatccaaa
atctcctgggccagagatgacacgctggaaaccattgatgggatacgctttttccctcta
aacgaatctttgcaaatcatcagtgcagacaaaaaagacagtgggatataccagtgtgtt
gcctctaacagcgagggcaagtctgatatcactgccgtgctggatgtgaaagaccctaca
cacatagtatacccacctcaggacgtgcaggtcatcagtggcaccacagcccagctgatg
tgccaggcagagtatgataaaagcctgcagagcacctttgaggtggtatggaggaaggat
ggtgaagagatcccacttttgtctgaagaaaattccagatactttgcggactatggcatg
ctgcagatcatgagtgtgaacctgagcgatcagggagcgtacacgtgcgttgccagaacc
agcctcgatggggacaatgccactgcactgctcaccgtgctggatgttcccgatgctccc
aaaattgtagagatttcagaacttcagagtccgaggaatattagcctggattggataccc
gggagtgaccacaacagctctgtgatagagtttatagtggagtacgaggagagccaatgg
gagcccggaaggtggcgggagctacagaaagtccccggtaaccaggcaacagcggagctg
gcactacatggtaaccttaactaccagttcagagtgtatgctgttaatgctgttggacct
ggaccccccagtgagcccactgagagatacaaaacaccccctgctgctcctgaaaaaaac
ccagcaaacatcaaaattcaaggccattctcctaatcaaatggacattagctgggagccg
ctgttgccaattgaacacaatggcccaggcctcgagtacagggtgcgctacagaaaactg
ggggtgggagatgaatggaagttgcatatggtcaacagacactcctttgtcgtgaggaac
acgtccacgtttgtcccctacgagatcgaaattcagagcaggaacagccatggctgggga
ccagaacctaaaatcgtcactggttactctggagaagatgtcccgaccgcagcaccacgg
gacatagcggtggaggtgatcaacaccactgttttgagagttagctggacccccgccccc
gccgccacagtgagaggtcatctcgggggccaccatgttcactgggtgaggagacgaagt
ttgctgaatccgaacaagattttggatgagcgccagtccctgtcttttcctgggaagagg
actcatgccatcgtgccgggcctcgagcctttctccgagtacagactcactgtcaatgtt
ttcaacaagaagggcaatgggcccaacagtgacccggtcacattcaacactccagaggga
gctcctgcacaagtgcccatcctgactgcctccaacgcccagatagactccatactgctg
gtgtggggcccgccgcgggaagccaacggcatccttactggttatctcctgcagcaccac
ctcattaatgagaccacattggaggtagtggactcccaggagacccacatcaccggggct
gacaccacccagtggaagctccatggcttggagggggggagcctctaccgcttcctcctc
agcgcctgcactgcagccggctgcggccccccgctgacccaggagagcagcactgtagcc
ctagaacatttgtccccgactccagctggggcccctgttcagagcattccagccttgttg
aacgtaagctcttatgtgagtgacacctttgccaaaatcagctggactgccatagaagag
cagcaggactcggagctttatgtggcttatatgaataacagtgatggtttctggcggatt
tcagaggctgtaaacgcttctcaaggtttccacgttattgatgggctcaaacctgggacg
gtgtacactgtgcgcctcatgtccaagaggctgctcgataacgctagcatttttgaagac
gttatccaaactcgattacaaggtgctgtaggtcagaagagcagtttttccacccagggc
tggttcatcgggaccatgtgtgctgtggcgctcctcaccctcgtggtactcatggcctgc
tttgtgcgacggaacagaggtggcaagtatgcaggtacgccgcctccgacccagagacaa
gaaatgttctccatggaaaaagtgaaagagaaggaggacctccacccggacccggagtcg
caaggattgaatgaggacagctttggtgactgcagtgacagcgaagagaagccactgaag
ggcagtagcgtgtgttccctgaatggcgcgatgggggacggcgtcagcagagacagcatg
gttgactacgccgacggcggacgagaattcaacgaggacggttcatttatcggagaatat
tccgatcgcaggcaaggaggctctgttagcgagcccagtggacccagaccagtcactgca
taa
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