Trematomus bernacchii (emerald rockcod): 117494152
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Entry
117494152 CDS
T09643
Symbol
prex1
Name
(RefSeq) phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein isoform X1
KO
K12365
phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchanger 1 protein
Organism
tben
Trematomus bernacchii (emerald rockcod)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
DEP
SOS1_NGEF_PH
PDZ
PH_10
PH
PDZ_6
Motif
Other DBs
NCBI-GeneID:
117494152
NCBI-ProteinID:
XP_034000772
LinkDB
All DBs
Position
Unknown
AA seq
1649 aa
AA seq
DB search
MEEDDGHHENGIHATKESDRQQRLRLCVLNEMLNTERDYVRILLFLQSAFLHRIRKNADD
QQCLSPEHVKILFSNIEDILELHKEVLSAFEASLQPEPQPHHALGHVFLQFRKSFSVYGE
YCSNHEKALRLLMELNKIPNIRTFLLHCMLLGGKKSTDVPLEGYLLSPIQRICKYPLLLK
ELLKRTPKKHADYPAVEEALQAMKAVCSNINETKRQMEKLEALEQLQSHIEGWEGTNLTD
ICTELLLHGNLLKISAGNIQERVFFLFDNLLVYCKRKSRVSGKKSTKRTKSINGPLYVFR
GRINTEVMEVENVEDGTADYHSNNYTVTNGWKIHNTAKNKWFVCMAKNAEDKQKWLDAIL
REREQRESLKLGMERDAYVMIAAKGEKLYHMMMTKSRHLIKDRRRKLSIVPKCFMGNEFV
SWLIESGEISKSDEGVNLGQALLENGIIHHVSDKHQFKNEQVLYRFRYDDGTYKARSEME
DIMSKGVRLYCRLHSLHTPVIKDRDHHLKTFKSVIPASKLVDWLLLQGDCTTREDAVTLG
VGLCNNGFMHHVLEKSEFKDESQFFRFYADEEMEGTSTKSKQLQRNDFKLIENILAKSLV
IHPEEEDYGFEIEEKNKAIVVKSVTRGSHAEMAGLQVSRKIFTINEDLLFLRPFSEVETM
ISQAFCMRRSLRLLVATKAKEIVKIPDNPDSLSFRLRGSSPPHVLAVRKGWEAAGAGLQP
GQVIQKVNGNNMNHSDYQEVLEHFSAQHTHQEPPQACQWVYHAFEDVEELQREGGTGEKE
ESPFSPYPVENGSDHEEENGTNGTDHQLGRLSLSDDLPMVSLTVDNVHLEHGVVYEYVST
AGIKCHVLEKMVEPKGCFSLTAKILEAFSGDDSLFVRNCSQLISQSDRVVTMPQYEFRQI
CDTKLESIRRRIDSYKQFALELRNKAWPSFRQAGVRPHPLGCMDFVPTNCQVNFMQVSNP
KSTTSAGRTFSIRFGRKNSIYGLDPDQAQLNPMSHIQHCVTSMGAPSWNCSGLEEDELDG
SGDVSMDGGEGLNDSRRSIHSEGGLSFLLKQEDTETQDAYIHLYSRLDVAVREMRQYVAQ
IDVLLSSITEPTQLQGEGGEPPVYEPSQPPSLAPCEDGCDQDKVEQGGIKRVCFKVNEED
QEDSGHDTMSYRDSYSECNSNRDSVLSYTSVRSNSSYLGSDEMGSGDELPCDMRIPSDKQ
DKLHGCLEHLFNQVDSINSLLKGPVMTKACDETKHFYSDHSQPEFRQTEDWTVRCRYIIH
KNIQEDPWNLPSSIKTLVESLQRFVDDGKNQLLLALLKCTGSVTHTSLQLRRDVIFCQAA
TGALCTLAEQLLAALRSRFNNAGEYQEDGKETSRKWLEQISVIGVLLHFQSTLAPHLKEE
RTMLEDTKAALLDLDKVTVFFRQLEDECLVANSPVCYQVEGSRQALRVTLFLDSCHFSEL
PSRLQNGGSLKLHTVLFTRALERPEGVSQQDYAAMEEIQQRTNAVSLEKVKAYYRRLRAF
YLEKSNLPTDSNTTAMKIDQLLRPLNTLDDLCRLMQSYVNVRHSAQGHPSGVSVLCVSSE
LCNRLGACHITMCGTGMQRCTLNVTLEQAMILSRNHGLMPRCIMQTMDIMRKQGPRVELS
AKNLKVMDQMTPAFPRLFKLCLPPSDGDL
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggacgacgggcatcacgagaacggtatccacgccacgaaggagtcggaccga
cagcagcggctccggctttgtgttttaaatgaaatgctcaacaccgagagggattatgtt
cggatattgcttttccttcagtcggcctttttgcacagaatcagaaaaaatgcagatgac
caacagtgtctctcacctgaacatgtcaagattctgttttcaaacattgaggacatcctg
gagttgcacaaagaggtgttgtccgcatttgaggccagtctgcagcccgaacctcagccc
catcatgcactgggacacgtgttcctgcagtttaggaagagtttctcagtgtacggcgag
tactgcagtaaccacgagaaggctttgcgactcctcatggagctcaacaaaatccccaac
atcaggaccttcctgctgcactgtatgctactgggtgggaagaagagcacagatgtcccc
ctggagggctacctgctcagccccattcagaggatctgcaagtatcctctgctgttgaag
gagcttctaaagcggacccctaagaagcacgctgactatccggcagtggaggaagctctg
caggccatgaaggccgtctgctccaacatcaatgagaccaagaggcaaatggagaaactg
gaggctctggaacagctgcagtcccacatcgagggctgggagggcaccaacctgacagat
atctgcacagagttgctgcttcatggaaatctccttaaaatctcagcgggcaatatccag
gaacgcgtcttcttcctgttcgacaaccttttggtttactgtaagaggaagtccagggtt
tctggaaagaagtccaccaagaggaccaagtctatcaacgggcccctctatgtgttcaga
ggccgaatcaacaccgaggtgatggaggtggaaaatgtggaagatggaacagcggactat
cacagcaacaactacacggtgactaacggctggaagatccacaacactgcgaaaaacaag
tggtttgtctgcatggccaaaaatgcagaagacaagcagaagtggctggatgccatcttg
agagaacgggagcagagagagagtctcaaactgggaatggagcgggacgcctacgtgatg
attgcagcgaagggggagaagctctaccacatgatgatgaccaagagtcgccacctgatt
aaagatcgacgcaggaagctcagcattgtgcccaagtgcttcatgggaaatgagtttgtg
tcgtggctgatagagagcggagagatcagtaagtctgacgaaggggtcaacctgggacaa
gccttgctggaaaatggcatcattcaccatgtgtcagacaagcaccagttcaagaacgag
caggtgttgtaccgattccgctacgacgacggcacctacaaggcccgcagtgagatggag
gacatcatgtctaagggcgtgaggctgtactgccgccttcacagcctccacacgcctgtc
atcaaggacagagaccaccatctgaaaaccttcaaatcggtgattcctgccagcaaactg
gttgactggctactcctgcagggagactgcacgacccgagaggacgctgtgacgctgggc
gtggggctctgcaacaacggcttcatgcaccacgtgttggagaagagcgagttcaaagac
gagtcccagttcttccgtttctacgcggacgaggaaatggagggaacgagtaccaagagc
aagcagctccagcgcaatgacttcaaactcatcgagaacatcttagccaagtccctggtg
attcaccccgaggaggaagactacggctttgagattgaagagaaaaacaaggccattgtg
gtcaagtctgtcaccaggggctcacacgctgagatggcgggtctgcaggtgagcaggaag
atcttcaccatcaacgaggacctgctgttcctgcggcccttctccgaggtggagaccatg
atcagccaggccttctgcatgcgacgctccctccgtctgctagttgccaccaaggccaag
gagattgtgaagatccctgacaacccagacagcctctccttcagactgcgaggctcctcc
cctccacatgtgctcgctgtcaggaaaggctgggaagcggcgggggcggggcttcagcct
ggacaggtcatccagaaagtcaacggcaacaacatgaaccacagcgactaccaagaggtc
ctggagcacttcagcgcgcagcacactcaccaggagcctccccaagcgtgtcagtgggtg
tatcatgcatttgaggatgtggaagagctccaaagagaaggaggcacaggtgagaaggag
gagagtcctttcagtccttacccagtggagaacggctccgaccacgaggaggagaacggc
acaaatggaacagaccaccagctgggcagactttccctctccgatgaccttcctatggtc
agtttgacggtagataacgtccacctggagcacggcgtggtctacgaatacgtcagcacc
gcaggcatcaagtgccacgtcctggagaagatggtggagcccaaaggctgctttagcctc
actgctaagatcctggaggcgttttcaggcgatgacagcctctttgttcgtaactgcagc
cagctcatctcccagagtgaccgagtcgttaccatgcctcagtacgagttcagacaaatc
tgcgacaccaagctggagagcatccggcggcgtatagacagctataagcagtttgccctg
gagctgagaaacaaggcgtggccctccttcaggcaggcgggggtgcgccctcacccactg
ggctgcatggactttgttcccaccaactgccaagtcaacttcatgcaggtgtccaacccc
aagagcactacctccgctggcaggactttcagcatccgctttgggcgcaagaactccata
tatggcctggatcctgaccaagctcaactcaaccccatgtcccacatccagcactgtgtg
acaagcatgggcgctccttcctggaactgttccggcctggaagaggacgagttggatggc
agtggggatgtgagcatggatggaggcgaggggttgaatgacagtcggcggagcattcac
agtgaaggcgggttgagcttcctgctcaaacaggaagatacagagacccaggatgcatac
attcacctatacagccgcctggacgtcgctgtgcgggagatgaggcagtatgtggcccag
atagatgtcctcttgtcgtctatcacggagcccacgcaactccaaggggagggtggggag
cctccggtctacgagcccagtcagcccccgtctctggccccctgtgaggacggctgtgat
caggacaaagtggagcagggcggcatcaagagggtctgcttcaaggtgaatgaggaggac
caggaggactcgggtcatgacaccatgagctacagggactcctacagtgaatgcaacagc
aacagagactcagtcctgtcctacaccagtgtgcgcagtaacagctcctacttggggagt
gatgagatgggatcaggggacgagctgccatgtgacatgaggattccctcggacaaacag
gacaagctgcacggctgcctcgagcaccttttcaaccaggttgactccatcaacagcctc
ctcaaaggacccgtcatgaccaaggcctgtgacgagaccaagcacttttactccgaccac
agccaaccagagtttagacaaacagaggattggacagtgcgttgtcgttacatcatccac
aagaacatccaggaggacccttggaacctgcctagctccattaaaactctggtggagagc
ctgcagagatttgtggatgatgggaagaaccagcttctcctggctcttctgaaatgcaca
ggtagcgtaacacatacgtctctgcagctgcgacgggacgtgatcttctgccaggcggcg
acgggcgctctgtgcacgctggcggagcagctgctggcggcgctgcggtcgcggtttaac
aacgccggcgagtaccaggaagatggaaaggagaccagccgcaagtggctggagcagata
tctgtcatcggcgtgctgctgcacttccagtccacactagcaccgcacctgaaagaggag
cgcaccatgctggaagacaccaaggcggccctgttggacttggacaaagtcactgtgttc
ttcaggcaactggaggacgagtgtctcgtcgcaaactcaccagtgtgttaccaggtggag
ggcagcagacaggccctgagggtcaccctgttcctggacagctgtcacttcagtgagctg
cccagccggctgcagaacggaggcagcctcaaactgcacaccgtcctcttcaccagggct
ctggagcgtccggagggagtgtcccagcaggactacgcagccatggaggagatccagcag
cgcaccaacgctgtctcactggagaaggtcaaggcttactaccgcagactcagagctttc
tatttggagaaatccaatcttcctacagactcaaacaccacagcaatgaagatcgaccag
ctgctgcgacccctcaacacgctggacgacctgtgccgactcatgcagtcgtacgtcaac
gtgcggcacagcgcccagggccacccgtcaggtgtcagcgtgctgtgcgtgtcctcggag
ctgtgtaaccgcctgggagcctgccacatcaccatgtgtggcaccggcatgcagagatgt
accttgaatgtgacactggagcaggcaatgatactatcgaggaaccacggtctcatgccg
cgctgcatcatgcagaccatggatataatgcgcaaacaggggccaagagttgagctctct
gctaaaaatctcaaagttatggaccagatgactccagcattcccaaggctcttcaagctg
tgtttgccaccttcagatggagacctctaa
DBGET
integrated database retrieval system
