KEGG   Trematomus bernacchii (emerald rockcod): 117494164
Entry
117494164         CDS       T09643                                 
Symbol
sort1b
Name
(RefSeq) sortilin 1b
  KO
K12388  sortilin
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04142  Lysosome
Brite
KEGG Orthology (KO) [BR:tben00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    117494164 (sort1b)
SSDB
Motif
Pfam: Sortilin-Vps10 Sortilin_C BNR_6
Other DBs
NCBI-GeneID: 117494164
NCBI-ProteinID: XP_034000800
LinkDB
Position
Unknown
AA seq 821 aa
MGLLLRGALLLSVFTFAAGLDSRLESNPFGQSLFARHSNIKAQAANIVKRALPAWLAASP
IHKIQRRSTEQGDSCKAIKGADTKLAENTHSYTFNDLSGSVSLAWVGDGTGVILALTTFQ
VPFFMIRLGQSKLYRSENYGKSFEDVTSLINNTFIRSEFGIAIGNSGKVILTGEVSGGLG
SRVFVSEDFGKSFIHRDLPFIPLSQITYNPDNSNVLLVLSNSNELWLSEDFGSNWKKIQD
TVCLVKWGRKNTIFFTSSRNGSCVDRGMLDLKRSSNYGKTVKTVASKIYSFGLGGRFLFA
SVMTGRGTLRMIHVSVDQGDKWNMAQLPPVGHEQFYSILAANDDMVFMHVDEPGDTGFGT
IYVSDDRGTVYSKSLERHLYTTTGGDTDFTNVTSLRGVFFTSVLAKDNSVQSVVSFDQGG
EWVPLRKPANSKCDATAKDPDKCTLHIHAAYSTAMKLNVPMLPLTEPNAVGLIISHGSVG
DAISVMKPDVYVSDDGGYTWLKALDGPHHYAILDSGGLLVAVEQSPNKPINTIKFSTDEG
QCWRNYVFTKEPIYFTGLASEPGARSMNVSVWGYRDALLSQYWISITIDFRDLLTRDCGD
DDYVQWLAHSDDISDPKDGCMLGYKEKFLRLRKDSVCWNGRDFKVNTSPTPCSCTLDDFL
CDFGYYRQENSSECVEQPDLKGKVLEFCLQGKEEQLQTSGYRKIPGDKCEGGKMPERKEI
DLSKRCVSDLVGPELLIDGPSSKSAPIVITVLIVMVLSIAAGVVFIKKYVCGGRFLVHRY
SVLQQHVEDNAVEGMDDPLDTDHTQNGKIEFHDDSDEDMLE
NT seq 2466 nt   +upstreamnt  +downstreamnt
atgggacttttgctgcgcggtgccctgctgttatccgttttcactttcgcagccggtcta
gattctaggctggaatccaaccctttcggacagtcgctttttgcgaggcattcaaacatt
aaagcacaagcagcgaacatcgtaaagagagctctgcctgcatggctggctgcatcacca
atccacaagatacaacgaagaagcaccgagcagggcgactcctgcaaagcaattaaagga
gctgacaccaagttagcagaaaacacccacagttataccttcaatgacctgagtgggtca
gtgtcgctggcctgggttggagatggcactggggtcattctggctttgacgacctttcag
gtgcccttcttcatgattagactcgggcagtcaaaactctatcgaagtgaaaactacggg
aagtcgttcgaagatgtgacgtccctcatcaacaacaccttcatcaggtcagagttcggc
attgctatcgggaacagtgggaaagtgatcctgacaggagaagtttctggaggtcttggg
tccagggtctttgtctctgaagactttggaaagagtttcatccaccgcgacctgcccttc
atccccctgtcgcagatcacatacaaccctgacaattccaatgtgcttctggtcctcagc
aacagtaatgaactgtggctgtctgaagattttggcagcaactggaaaaagatccaagac
acagtgtgtcttgttaaatggggaaggaaaaatacaattttcttcacatccagccggaat
ggatcctgcgtggatcggggaatgctggatctgaagaggtctagcaactatggtaaaacc
gtcaagacagtcgctagtaagatctactccttcggtctgggtggacgcttcctctttgcc
tctgtgatgacaggcaggggaactctcaggatgatccatgtgtcagtggaccagggtgac
aagtggaacatggcccagctgccccctgttgggcacgagcagttctactccatcctggca
gccaacgacgacatggtcttcatgcacgtcgatgagcctggagatacaggatttggcacc
atttatgtatcagatgaccggggcactgtgtactccaagtcattggagcgccacctttac
accaccacggggggcgataccgacttcactaatgtcacttccctgcgaggagtattcttc
accagcgttttggcgaaagataactctgtgcagtctgtggtgtcctttgatcagggaggg
gagtgggttcccctgaggaaacctgccaacagcaagtgcgatgctacagctaaagaccca
gacaagtgcactctccacatccatgcggcctacagcactgctatgaagctgaacgtcccc
atgctgcctctgactgaaccaaacgctgtgggcctcatcatatctcacgggagtgttggg
gatgccatctcagtgatgaagcctgatgtgtatgtgtctgatgatggggggtatacatgg
ctaaaggccctggatgggccccatcactatgctattctggactctggagggctgctggtt
gctgtggagcaaagccccaataaacctatcaacaccatcaaattttctactgatgaagga
cagtgctggcgtaattacgtcttcaccaaagaacccatctactttactgggctggcctcg
gagccgggagctcgctccatgaacgtcagtgtctggggctacagagacgccctcctcagc
cagtactggatctccatcaccatcgacttcagggatctgctcaccagagactgtggtgat
gatgactatgtgcagtggttggctcactctgatgacatcagtgaccccaaagatggctgc
atgctgggctacaaagagaagttcctgcgtctcaggaaggactctgtttgctggaacgga
cgagatttcaaggtcaacacgtcaccgaccccctgttcgtgcaccctggatgacttcctg
tgtgactttggttactaccgtcaggagaacagctctgagtgtgtggagcagccggacctg
aagggcaaagtgctggagttctgtctgcaaggcaaagaggaacaactgcagaccagtggc
tataggaaaatccccggagataaatgcgagggaggaaagatgcctgagcgtaaagagatc
gacctcagtaagaggtgtgtgagtgacctggtgggccctgaacttctgatcgacggtccc
tcctccaagtctgcacccattgtgataacagtcctcatcgtcatggtgctgagcattgca
gccggagtcgtcttcatcaagaaatatgtctgtggtggcaggttcctggttcacaggtac
tctgtgctgcagcagcatgtcgaggacaatgctgttgaagggatggacgaccccctggac
acagaccacactcagaatggcaagatagagtttcacgacgactcagatgaggacatgctg
gaatag

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