Trematomus bernacchii (emerald rockcod): 117494192
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Entry
117494192 CDS
T09643
Name
(RefSeq) tubulin alpha-1B chain-like
KO
K07374
tubulin alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04145
Phagosome
tben04210
Apoptosis
tben04517
IgSF CAM signaling
tben04530
Tight junction
tben04540
Gap junction
tben04814
Motor proteins
tben05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117494192
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117494192
09143 Cell growth and death
04210 Apoptosis
117494192
09144 Cellular community - eukaryotes
04530 Tight junction
117494192
04540 Gap junction
117494192
09142 Cell motility
04814 Motor proteins
117494192
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117494192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tben03019
]
117494192
03036 Chromosome and associated proteins [BR:
tben03036
]
117494192
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tben04812
]
117494192
04147 Exosome [BR:
tben04147
]
117494192
Messenger RNA biogenesis [BR:
tben03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117494192
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117494192
Cytoskeleton proteins [BR:
tben04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117494192
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117494192
Exosomal proteins of other body fluids (saliva and urine)
117494192
Exosomal proteins of colorectal cancer cells
117494192
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
117494192
NCBI-ProteinID:
XP_034000856
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFMETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEVIDLVMD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICCKNLDVERPSYTNLNRLMSQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNSCFEPAN
QLVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSVGDEEGEEY
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtctctccatccacgtcggtcaggctggtgtccaaattggcaatgcctgc
tgggagctttactgcctggaacatgggatccagccggacggacagatgcccagtgacaag
acgattggaggaggagacgattccttcaacaccttcttcatggagactggagctggaaag
cacgtccccagagcagtttttgttgacctggagcctactgtcatcgatgaggttcgcact
gggacctaccgccagctgttccaccctgagcagctgatcactggcaaggaggatgctgcc
aacaactacgcccgtggacactacaccgtcggcaaggaggtcatcgacctggtgatggac
aggatccgcaaactgtcggaccagtgcactggtcttcagggtttcctggttttccacagc
ttcggagggggcaccggctctggtttcacctccctgctgatggagcgtctgtctgtcgac
tacggaaagaagtcaaagctggagttcgccgtctacccagctccccaggtgtccactgct
gtggtggagccctacaacgccatcctcaccacccacaccaccctggagcactctgactgt
gccttcatggttgataacgaggccatctacgatatctgttgtaaaaatcttgatgtcgag
cgtccctcttacaccaacctcaacaggttaatgagtcagattgtgtcctccatcactgca
tcccttcgttttgatggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccacttccctctggccacctatgcccctgttatctctgcagagaaa
gcttaccatgagcagctctcggtggcagaaatcaccaattcctgctttgagccagccaat
cagttggtgaaatgtgacccacgccacggtaaatacatggcctgctgccttttgtaccgt
ggtgatgtggttcccaaagatgtgaatgctgccattgcaaccatcaaaaccaagcgctcc
atccagtttgtggactggtgccccactggtttcaaggtgggcatcaactaccagccgccc
actgtagttcctggtggagacctggccaaggtgcagagggctgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcggctggaccacaagtttgatctgatgtatgct
aagcgtgcctttgtgcactggtatgtgggggagggtatggaggagggggagttttctgag
gccagagaagacatggctgctctggagaaagattacgaggaggttggagctgatagtgtg
ggggatgaggaaggagaggagtattag
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