Trematomus bernacchii (emerald rockcod): 117494223
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Entry
117494223 CDS
T09643
Symbol
hoxc5a
Name
(RefSeq) homeobox protein Hox-C5a
KO
K09305
homeobox protein HoxA/B/C5
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117494223 (hoxc5a)
Transcription factors [BR:
tben03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
117494223 (hoxc5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
NOD
DUF2209
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117494223
NCBI-ProteinID:
XP_034000905
LinkDB
All DBs
Position
Unknown
AA seq
226 aa
AA seq
DB search
MSSYVDSCNLRQTSETTSPNTMFSFDLSGRPSSHYEGVNVNGIFTCPVPTTSVEREEMKT
SLRGITDTPLPSGPQITMVSSSSSMDSSGLNYGSSTLLGRGVDRDPERSAKSVGNNDSER
NAENTQTVKRHTNVNQRQDSEQRPQIYPWMTKLHMSHESEGKRSRTSYTRYQTLELEKEF
HFNRYLSRRRRVEIAHTLCLNERQIKIWFQNRRMKWKKDSKIKVKE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgagctcttatgttgacagctgcaatctcaggcaaacaagcgagacaacttctcctaac
actatgtttagtttcgatctttccgggcgcccgtccagccactatgagggtgttaatgtg
aacgggatattcacttgtcccgtccccacgacctctgttgaacgggaggagatgaaaact
agcctgcgtggcattacggatactcctctcccgtcaggaccacagataaccatggtctcc
agcagctcgtccatggactcaagcgggctgaactacggcagcagcactctgcttggacga
ggggtggacagagacccggaaaggagcgcaaaatccgtcggtaacaacgacagcgagaga
aacgcggagaacacgcaaacggtgaaacgacacacaaatgtgaaccagcgtcaggacagt
gagcagcggccacagatttatccatggatgacaaaactgcacatgagccacgaatcggag
ggtaaacgctccaggaccagttacacccgctaccagactctggagctggagaaagagttt
cacttcaaccggtacctgagccgccgcaggcgcgtagagatcgcccacaccctgtgtcta
aacgagaggcagatcaaaatctggttccagaacagacgtatgaagtggaagaaggactca
aagatcaaagtgaaggagtaa
DBGET
integrated database retrieval system
