Trematomus bernacchii (emerald rockcod): 117494275
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Entry
117494275 CDS
T09643
Symbol
soga1
Name
(RefSeq) protein SOGA1 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117494275 (soga1)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
117494275 (soga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TSC22
Rsa3
Motif
Other DBs
NCBI-GeneID:
117494275
NCBI-ProteinID:
XP_034001004
LinkDB
All DBs
Position
Unknown
AA seq
1893 aa
AA seq
DB search
MTKTKEVDVHTSPADLVFASAKERRLHLRQKMDSGGGAEGSDSGQTQHAVPGQQQPTHRP
ETAELSAAVSAQPSGKKKKINRAPSPARPKDVPGWSLTKIRGGIGTPTLSVKPGGIHLGS
RISRRSPVGSLAGKEGKADKSKPAGKSSSASSKTANAVKSTGGRRKVSDASTGSDDLSKD
SGCATGKLSPTDSSSELSDCASEENKLSADAVSSDAESRSSRGGGLDGDKPLRDGVLAER
ASQHATNRTTCFSSERDYKDRLSLAVETGEGSISPGEERSVTSFDSRVPPSTSLAFSDLT
EEFMDGMHEEFVREIEELRSENDYLKDEMEELRSEMLEMRDMYMEDDVYQLQDLRQQMEQ
ANKTCRILQYRLRKAERRSVRVAQTGQVDGELIRTLEQDVKVAKDVSIRLHKQLDSVEKK
RSRHEQENEELRVRLQDLEVAKQVLQQEIEKNSQKKRAARPNNKPDKKLCPQEDNSDLKC
QLHFAKEESALMCKKLTKLVKDSEAMKEELVKFRSLYGDVNASLTVEEVADSPHTREAEI
RVHLKLVEEEANLLSRRIVELEVENRGLRAEMDDMKQDCPQDLSGVGGGLGSGLGLGGAM
VLGGGASSENVMELQRHLQFVEEEAELLRRSLIEMEEQNKLLMNEINRYKSDFPPPTSSM
SSNSLDGLLNDSPVHSIQEGAVLISTDAPVQEEELRLARLQIGELGGKVKKLQYENRVLL
SNLQRCDLASYNAPSSSSSSSSLRLALETDAEAGDSAECLPSPPHRKEPVGGETDTLEMK
ERKKKIEDNADATTSLPGYLGQKDHDALLAMRDQARLVSTAIQLLTSPESNCLSSSPSIY
HKVCSSDAAEPCDLEKPHSQICELSDLADRPLVGALTSRLQALHTQLQAFVERVDSQGKP
PAGGRDPQVEGASPLPPPCSGEEQDVLNTTVEKQPDYRDESETNVRGQTEEESQSDSQEM
QKQEDSQLEQGEKEADDTLSGDIQARLSEVEELSLGPQGELEERQAPRETTLKLTQLQEE
HQKALLRRDFQLQSLGLQARLQQKLWSQERSLLVQESQHLKQALLLLSLKLRCFLKHWRL
GCRKDTEWKDILEMNSLRDLYLLLEEENLTSPTHQTDKRAAADEQPLSPTIKSSAVSSTL
ADLKVALRDLSGELRQERQGSQELTQQFAKAKASWEVERTELKSLVTQLETKAGKALSAT
DAPDPPDLKVALKRECEEHQHLLADSYAAVMDLTKQLQLGERNWGREKLELLERLSQERA
QWEQRLLEATAQQGKVRQAAFVCSKSLGGESSADTGVTNGTGSPRAKSTSELSGAEVDGS
ANQEQRIQFVVPSLGDLTRKNWTYLTNETPEVGDTCKTWDGPSGSCSSLVGSELDLESVQ
RSHTAPDRTGIRIYYSPPAVRRMEHHRRSQEATEPQQAQNGSSDLGLAGPDVGMAPEETV
EIQQQQPSPSFSSSYEQWLSSLSKQHRELLESRSGSIAGSIPSNSSSVDGMTPSSAFHGL
EIGEISANLSDDMKEMTNCVRQAIRSSSLERKSTKEPGSQAMGMSTRSTQTATQYVSIGL
QTDILPGSRVAGLHSKSWSPRPLPTTNSLASARTRQISTSLDKVHSRIDRPCCSPKYGSP
KLQRRVSSGSTSRLDGSTSSRDRSLWSLQQRSLSGGGGSAWARSTTTRDSPVLNGLNDGL
SSLFSLVEHTGSTESLWRGDGGASQGASPARQPAAAGKPTAVPLSTCDPGPQRYGGLVQE
FFRNVCSSRGQGAVTLPGERPLRDSNGSLGGLSVLGSFGGIDEPKPECVSAGVGGIAALN
GSNDNVTRIVNKRFMRQSTGEEMINIMGGGKELMSNTGAAGTVTEDAPCDCAAQSSCPAR
PSRATTRHSLGQCKHRPQESPAAPEEKSDTCNE
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaacaaaggaagttgatgtccatacctctccggctgacctcgtcttcgcctcg
gccaaggaacggaggctccatctccggcagaagatggacagtggaggcggggcggagggc
tcggacagcgggcaaactcagcacgcggtgcccgggcagcagcagccaacccaccggcct
gaaaccgcggagctctctgcggcggtgtccgctcagccttcaggcaagaagaaaaagata
aaccgggctccctccccggccagaccgaaggatgtacccggttggtcgctcaccaagatt
cgcggagggattgggaccccgactctgagcgtcaagccgggaggcattcacctgggcagc
cgtatttcccggcgcagccccgtgggaagtctcgctggaaaggaaggtaaagcggataag
agcaaaccggcgggcaaatcatcctcagcgtcgtctaaaacggccaacgcagtgaaaagc
accgggggtcggcgtaaggtttcggacgccagcacaggctccgacgatttatctaaggac
tccggctgtgccaccgggaagctctccccgaccgacagtagctccgaactctcggactgc
gcctccgaggaaaacaagctctcagcggacgctgtgagtagcgacgccgagtcgaggagc
agccgaggcggggggctagacggagacaagccgctcagggatggcgtgttggcagaaaga
gctagccaacatgccaccaacaggaccacctgcttctcctcggagagggactacaaggac
cggctctccctggccgtggagacaggggaagggagcatatccccaggcgaggagcgctcg
gtcacctcgtttgacagcagggtgccccccagcacatctctggctttctcagacctcaca
gaggagtttatggacggcatgcatgaggagtttgtacgggaaatagaagaactgagatct
gagaatgattacctcaaggatgagatggaggagttgaggtctgagatgctggagatgagg
gacatgtacatggaggacgacgtctaccagctgcaggacctacggcaacagatggagcag
gctaacaagacctgccgcatcctgcagtaccggctgaggaaggcagagcgacgctctgtg
cgcgtggcccaaacagggcaggtggacggagaactgatacgaacactggagcaggacgtc
aaagtggcgaaggacgtgtccatccgtctacacaagcagctggacagcgtggaaaagaag
aggagtcgccacgagcaggagaacgaggagctgcgggtccgcctgcaggacctggaggtc
gccaaacaggtcctgcagcaggagattgagaagaactcccagaagaaaagagcagcacga
cccaacaacaaacctgacaagaagctctgcccacaggaggacaattcagacctgaagtgt
cagctccactttgccaaagaggaatcagctctgatgtgcaagaagctgaccaagctggtg
aaggacagtgaggccatgaaagaggagctggtcaagttcaggtcgctgtacggagacgtc
aacgcctcgctcaccgtggaggaggtcgccgactccccccacacccgtgaggcggagatc
agagtccacctgaagctggtggaggaagaggccaacctgctgagtcgacgcatcgtggag
ctggaggtggagaacagggggctccgagctgagatggacgacatgaagcaagattgccct
caggacctaagtggtgttggcggtggtctggggtcaggtcttggcctaggaggagccatg
gttcttgggggcggggcttcgtctgaaaacgtcatggagctccagagacacctccagttt
gtggaggaggaggcggagcttctgaggaggtctctcatcgagatggaggaacagaacaaa
ctcctgatgaacgagattaaccgctacaaatctgacttcccgcctccaacgtcctccatg
tcgtctaactcattggacgggctgctcaacgacagcccggtgcactccatacaggaaggg
gcggtgcttatcagcacagacgcccccgtccaggaggaggaactcagactggcgaggcta
cagattggagagctgggcgggaaggtgaagaagctgcagtacgagaaccgagtgcttctg
tctaacctgcagcgctgcgatctggcctcctacaacgctccttcctcctcctcctcttcc
tcctcactacgactggctctggagacggacgcagaggccggggactcagctgagtgcctc
ccaagcccgccgcaccgcaaagagccggtggggggggagaccgacaccctggagatgaag
gagcggaaaaaaaagatcgaggacaacgctgacgcaaccacctcgctccccgggtacctg
gggcagaaggaccatgatgccttgctggccatgagggaccaggctcgcttggtttccacg
gcgatacagctcctgacctcccccgagtccaactgcctctcctcctccccctccatctat
cacaaggtctgcagcagcgacgcagcggagccgtgtgacctggagaaacctcacagccag
atttgcgagctctctgacctggcggaccggcccctggtgggggctctgaccagccggctc
caggccctccacacgcagctccaggcctttgtggagcgggtggacagccaggggaaaccc
cccgcaggtggaagggaccctcaggtggaaggagcgtctcctctgccccccccctgctct
ggagaggagcaggatgtactgaacactaccgtggagaagcagcctgattatagggacgaa
tcagagaccaatgtaagaggtcaaactgaggaggagagccaatcagacagccaggagatg
caaaagcaggaagacagccagctggaacagggagagaaggaggcagacgacacactgtcc
ggtgacatccaggcgcggctgtccgaagtggaggagctgtctctgggacctcagggggag
ctggaggagaggcaggctccgagagaaaccactctcaaactcacacagctccaggaggag
caccagaaggctctgctccgtcgggacttccagctgcagagtctgggcctccaggctcgg
cttcagcagaagttatggagccaggagaggtctctgctagtgcaggagtcccagcacctg
aaacaggccctgctcctgctcagcctcaaactacgctgcttcctcaaacactggaggctg
ggctgcaggaaagacacagagtggaaggacatcctggagatgaacagtctgagggacctt
tacttgctgttggaggaggagaacctgacaagccccacccaccagactgacaagcgggcc
gctgcagacgaacaacctcttagtcccactatcaagtctagcgcagtgagcagcaccttg
gcagacctgaaggtggcgttgcgggatctgagcggcgagttgcgacaggagagacaaggc
tcccaggaactcacccagcagttcgctaaggccaaggcatcatgggaggtggagaggact
gaactcaagagcctcgtcacacagcttgagaccaaagcaggcaaggctctgtccgccaca
gatgctccagatcctccagacctgaaggtggcgctgaagagggagtgtgaagagcaccag
cacctcctggccgactcctacgcagctgtgatggacctaaccaagcagcttcagctcggg
gagaggaactggggcagagagaagctggagctgctggagaggctgagccaggagagagct
cagtgggagcagaggctgctagaggccacggcacagcaggggaaggtacgacaggctgcg
tttgtttgttcaaagtcattaggcggcgagtcctctgcggacacaggagtcactaatgga
acaggatcgccaagagccaaatccacatcagagctttccggtgcagaagtcgacggatca
gccaatcaggagcagaggatccagtttgtagtcccttcgcttggtgacctcaccaggaag
aattggacctacctgaccaatgagaccccggaggttggggacacctgtaagacctgggac
ggccccagcggctcctgcagcagcttggtgggatcagagctggatctggagtcggtccag
aggagccacacggccccggaccgcaccggcatccggatctactacagcccccctgctgta
cgacgcatggagcaccaccggaggagccaggaggccacagagcctcagcaggcccagaac
gggagctctgacctgggactggcgggcccggatgtaggcatggctccggaggaaaccgtt
gagattcagcagcaacaaccttcaccctccttctcatcctcctacgagcagtggctgagc
tcgctgtccaagcagcacagggagctgctggagagcagaagtggctctatcgccggttcg
atccccagcaacagtagctcagttgatggaatgacaccctcgtcagctttccatggtctg
gagatcggggaaatttcagccaacttgagtgatgacatgaaggagatgaccaactgtgtc
cgccaggccattcgctcgtcctctctggagaggaaatccaccaaggaacccggaagccag
gcgatgggcatgtccacccggtccacgcagactgccacacagtacgtaagcatcgggctt
caaaccgacatccttccaggcagcagggtggcgggtttacactccaaatcctggtctcct
cgccccttgccgacaaccaactcgctagcatccgccagaacccggcagatatccacctcc
ctggataaagttcacagccgcatcgatagaccatgctgttcaccaaagtatggatccccg
aaactacaacgcagagtgtcttctggctccacttccagactggatgggagtacctcctcc
agggaccgcagcctgtggagcctccagcagagatccctgagtggaggcggaggctctgcc
tgggctcgctccaccaccacccgggacagccccgtgctgaacggcctgaatgacggcctc
tctagcctcttcagcttggtggagcacactggaagcacagagtcgctctggaggggggat
ggaggagccagccagggagccagtccagcacggcagcctgctgcagcggggaaacccact
gctgtgccactctctacatgtgaccccggccctcagcggtacggaggcctggtccaggag
ttcttcaggaacgtctgcagcagccgtggccagggagcagtcaccctgcctggggagaga
ccactgagagactccaatggcagtctcggaggtctgagtgtcttgggtagttttggcggc
attgatgaacctaaaccagagtgcgtgtcggccggggttggaggaatcgctgcgctgaac
ggaagcaacgacaatgtgacccggatcgtcaataagaggtttatgagacagtcaaccggg
gaggagatgatcaatatcatgggaggaggaaaggaactgatgagcaacacgggggctgca
ggaactgtgacggaggatgcaccttgtgactgtgctgcccaatcttcctgcccagctcga
ccatcgagagcaacaacccgccattcgctcggccagtgcaagcaccgcccacaagagtct
cctgcagcaccagaagagaagagtgacacctgcaacgagtga
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integrated database retrieval system
