Trematomus bernacchii (emerald rockcod): 117494290
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Entry
117494290 CDS
T09643
Symbol
nphp3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tben03037
]
117494290 (nphp3)
Cilium and associated proteins [BR:
tben03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
117494290 (nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_2
TPR_8
TPR_MalT
TPR_16
TPR_14
NPHP3_N
TPR_19
AAA_16
TPR_11
NACHT
AAA_22
TPR_6
ATPase_2
KAP_NTPase
AAA_14
AAA
AAA_19
XRCC4_CC
Pox_H7
Motif
Other DBs
NCBI-GeneID:
117494290
NCBI-ProteinID:
XP_034001025
LinkDB
All DBs
Position
Unknown
AA seq
1302 aa
AA seq
DB search
MGTASSLVSPGEVIEDGYGGEGGEACVIPVEVKPKARLLRSSFRRAPRVIGASFKSTGSV
DLEYAAEYERLRKEYEIFRVSKNNEITSMQKKEAKLDEENKRLRAELQALQKTYQKILRE
KESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLEAKLQQLQAQ
GIQIYDLNDSDSDDNQTTVTAAETQCDYWSGGVLGSEPSMGSMMQLQQTFRGPEFAHSLI
DVEGPFANVGRDDWDAAVASLLQVSPHVPQALWSNTVRCYLIFTQETKPELDVFIKKHSP
VLRKMCEGLGHFYLNVCFPEESAASYDVERKQEIERSSVCVLLVKSTVTSSVVEDCEEAF
VKNPDGHPLVLYLRTEEDHTLTGPTRQLLERINAADKAAKVKVVDHSGSAEEGADLIYSQ
LEKVIKQELLCLEGADVDSKDSGIDEGREEDSGDVLWDLHDEQEQIESYQQACSSTSSQL
GFQKYIDRLNDMIAAPPPTPPLLVSGGPGSGKSLLLSKWIEQQQKQSPNTLFLYHFVGRP
LSTSSEPVLIIKRLTVKLLQHFWSISGLSMEPSKILEEFPRWLERLSARHQGNIIIIIDS
IDQIQQAERHMKWLIDPLPVNVRVVVSVNVETCPQAWRLWPTLHLDPLSPREVRSVVNAE
CQSMELKLTKDQEKKLERHCRSASTCNALYVTLLARMIISSISGCPLEKSLEQCLQCQDT
MSLYRLALKMTLNSLNTDRERHIMREILCLVCSSHNGVSESEVLDLFTELELPVLSSLLY
RLNRLCIVTLRCGLIRFQHLQAWEAVRLEFLGGGSSSAAYREKLIQYFSQQLSPDRVTWR
VADELPWLLQQQDDRTKLQLSLLNLFVSQNLYKRGHFSELLAYWQYVGKDKSSMATEYFD
SLKQYEKSCENEDSMTKLANLYETLGRFLKDLGLPSQAVAPLQRSLEIRETALDPDHPSV
ARSLHQLAAVYVQWKKYGNAEQLYKQALEISENAYGAEHASVARELESLAMLYQKQNKYE
QAEKLRKRSVKIRQKTARQKGHMYGFTLLRRRALQLEELTLGTDSADSAKTLNELGVLYY
LQNNLDAAKLFLTRSLETRQRVLGPDHPDCAQSLNNLAALHTERREYETAEDMYERALDI
RKRALSPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYELSLDIREKSFGPKHPSVATALVN
LAVIYCQLKNHSDALPLYERALKVYEDSLGRSHPRVGETLKNLAVLSYEEGDFEKAAELY
KRAMEIKEADPSLVCGNAPSRHSSSGDTFSLRGPAPLPQAPR
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgcatcgtccctggtcagcccaggagaggtgatagaggacgggtatggaggt
gaaggaggggaagcctgtgtgatcccggtggaggtgaagcccaaagccaggctcctccga
agctccttccgcagagcgcctcgcgtgatcggggccagcttcaaatccaccggttctgtg
gatctagagtacgctgctgagtatgagcgactccgaaaagagtatgaaatcttccgtgtg
agcaagaacaacgagataacatccatgcaaaagaaggaagccaagctggatgaggagaac
aagaggctgagggctgagctacaggctctgcagaagacctaccagaagatcctaagagaa
aaagagagcgctcttgaggcaaagtaccaagccatggagagggctgccaccttcgaacac
gacagggacaaagtcaaacgacagtttaagatcttccgggagacaaaagaaaaagagatt
caggatctcctgcgggccaaaagggacttggaggccaaactgcaacagctacaggctcag
ggaatccagatctatgacttaaatgattctgactcagatgacaaccaaaccactgtcaca
gctgcagagactcagtgtgattattggtctggtggggtgctgggaagtgagccctctatg
ggcagcatgatgcagttacagcagaccttcagaggacctgagtttgcccacagtttgata
gatgtggagggaccctttgcaaatgtgggcagagatgactgggacgctgccgtggccagt
ctgcttcaggtctcccctcacgtgccccaggccttatggagtaacaccgtgcgctgctac
ctcatcttcacccaggagaccaaacctgagctggatgtctttattaagaaacactcacct
gtgttacggaagatgtgcgagggtctcggacatttctacctgaacgtgtgcttcccagag
gaaagcgctgcctcctacgatgtggagcgaaaacaggagattgaaagaagctctgtgtgt
gtgcttctagtcaaatcgactgtaaccagctctgtggtggaggattgtgaggaggctttt
gtgaagaatccagacggccatccactggtgctctacctcaggactgaagaagaccacact
ctgaccggacccaccagacaactgctcgagagaattaacgctgcagacaaggctgctaaa
gtcaaggtggtggatcacagtggttctgcagaggaaggggctgacctaatttattctcaa
ctggaaaaagtcatcaaacaggagctgctgtgtcttgaaggagcagatgttgactctaag
gactctgggatagatgaggggcgtgaggaggactcaggagacgtgctgtgggacctgcat
gacgagcaggagcagattgagtcctaccagcaggcctgcagcagcacctcctcccagctg
ggcttccagaagtatatagaccgtctgaatgacatgatagctgctcctcctcccacccct
cctctgctggtgtcaggtggtccaggctcaggaaagtctctcctgctctccaaatggatc
gagcagcagcagaagcagtctcccaacaccttgtttctttatcatttcgtcggtcgcccg
ctttccaccagctcagagccggtgctcatcatcaaacgcctcacggtcaaactgctgcag
cacttctggtccatatccggtctgtccatggagcccagtaagatcttagaggagtttccc
cgctggctggaacgattatcagcacgccatcaaggaaacatcatcattatcatcgactcc
attgaccaaatacagcaagcagagagacacatgaagtggctgattgaccctcttcctgtc
aatgtcagagtggtggtgtctgtcaatgtagagacgtgtcctcaagcgtggaggttgtgg
cccactctacacctggaccctctgagtcccagagaggtgaggagtgttgtgaatgcagag
tgccagagcatggaactcaaactaaccaaagaccaggagaagaagctggagaggcactgc
cgctctgcctccacctgcaacgcattgtatgtcacactgctggcaagaatgatcatcagc
agtatatccggttgccctctggagaagagcctggagcagtgtctgcagtgtcaggacacc
atgtctctgtaccgcctggccctcaagatgacgctgaactccctcaacacagacagggag
cgacacatcatgagagagatcctatgcctcgtttgttctagccataatggagtgagtgag
tcagaggtgttagatcttttcacagagctggagctgccggtcctgtcctctctgctgtac
cgtctgaacagactctgcatcgtgaccctgcgctgcggcctcatcaggtttcaacacctg
caggcttgggaagctgtaaggttggagttcctgggtggaggaagtagctcggctgcttac
agagagaaactcattcagtacttcagtcagcagctcagcccggaccgtgtgacgtggcgt
gttgcagacgagctgccctggctgctccaacagcaggacgatcggaccaaactacagctc
agcctcctcaacctgtttgtctcccagaacctctacaagaggggtcatttctctgagctg
ctagcctattggcagtatgtgggcaaagacaagagctccatggccacggagtactttgac
tccctgaaacaatatgagaagagctgtgagaatgaagacagcatgaccaagctggcaaac
ctgtacgagactttgggacgtttcctcaaagacctcggcctccccagtcaggctgtagca
cctttacaaaggtccctggagatcagggagacggccttggacccggaccaccccagcgtg
gctcgctcgctgcaccagctggccgcggtttacgttcagtggaagaagtacggcaacgct
gagcagctgtacaagcaggcactggagatcagtgaaaacgcctacggagccgagcacgcc
agcgtagcacgagagctggagtccctcgccatgctctaccagaaacagaacaagtacgaa
caagcagagaaactgaggaagaggtcagtaaaaatccgccagaagactgctcgccagaaa
ggccatatgtacggcttcacactgctgaggcgcagagctctgcagctggaggagctcact
ctgggaacagactctgcagactctgccaagacactcaatgaactgggtgttctgtactac
ctccaaaacaacctggatgctgctaagctgttcctgacccgctctctggagacccgtcag
cgcgtcctcggtccggaccaccctgactgcgctcagtccctcaacaacctggccgctctg
cacacggagaggcgggagtacgagaccgccgaagacatgtatgagagagcgctggacatc
cggaagagggctttatccccggaccacccgtcgctggcatacactctcaaacacctggcc
atgctctacaaacgcagagggaagctggagaaggccgtgccgctgtatgagctgtctctg
gacatcagggaaaagagttttgggcccaaacatcccagtgtggccacagcactggtcaac
ctggctgtgatctactgccaactgaagaaccacagtgacgccttgcctctttacgagcga
gcgctgaaagtgtatgaggatagtttgggacgttcgcacccacgggtcggagagaccctg
aaaaacctggctgtgttgagctacgaagagggcgactttgagaaggcggcagagctttac
aaacgtgcgatggagatcaaggaggcggatccgtcgctggtgtgcgggaacgccccgtcc
cgccactcctccagcggggacacgttcagtctgagaggacctgcccccctcccacaggcc
cccaggtga
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integrated database retrieval system
