Trematomus bernacchii (emerald rockcod): 117494355
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Entry
117494355 CDS
T09643
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben03040
Spliceosome
tben05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117494355
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117494355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tben03041
]
117494355
Spliceosome [BR:
tben03041
]
Common components
Common spliceosomal components
SR proteins
117494355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
Nup35_RRM_2
DbpA
Motif
Other DBs
NCBI-GeneID:
117494355
NCBI-ProteinID:
XP_034001115
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MPRVYIGRLSYNVREKDIQRFFSGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVIIENARGPRRDRDRDGDRDRDGHGGGYRGGGRSSGYSSRSHTGRDKYGPPVRTEY
RLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSHSDMKRAIDKLDGTD
INGRKIRLVADRQRKRRSDPGSRSSRRSHSRSSKSRSRSRSRSGSRSNKRRGQSRSRSGR
KSRSKSGESKSRSRNRRSRSRKSKSRSNSRKSRSGSAERKSKSRSKSRSKVKSERGSRSP
SKEMSVDKKSCCRSASPLENGKDEHVAKSASRSPTPHEDDRRSKSKEKSSPSLSRSRSRS
RSASQD
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtgtttatatcgggagactgagctataatgtacgcgaaaaggacatccagaga
ttcttcagcggatatggaaagctcatggaaattgatttaaaaaacggctatggattcgtg
gagtttgaggataaccgggacgctgacgatgccgtatatgagctgaacgggaaggagctg
tgcggggagcgtgtgatcatcgaaaacgcccggggaccacggcgagaccgggaccgagac
ggagaccgagaccgagacggccacggtgggggttacaggggtggtgggcgcagtagcggt
tacagcagccggagccacactggaagggataagtatggaccccctgtccgtactgagtac
cgtctcattgtggagaatttgtccagccgctgcagttggcaagacctcaaggacttcatg
cgtcaggcaggagaggtgacgtatgcagatgcccataaggaacgcacgaatgagggtgta
atcgagttccggtcccactcggacatgaaaagggccattgacaagctggacggtacagac
attaatgggcgcaagattcgcctggtggcagaccggcagcgcaagcgtaggtctgaccct
ggcagccgctccagccgtcgttcccacagcaggagctccaagagtcgctccagatcccgc
tcgaggtctggttcccgtagcaacaagagacgtggccagtcccgctccaggtctggaagg
aagtctcgctccaagtcgggagaaagcaaatcccgatctcgcaaccgcaggtcccgttct
cgcaaatccaaatcacgttctaactcccgcaaatcccggtccggttctgctgagcgaaaa
tccaaatctcgctcaaagagtcgttcaaaggtaaagtcggagcgaggttctcgcagcccg
tccaaggagatgtctgtggacaagaagtcctgctgtcgttccgcctccccactggagaac
gggaaagatgagcatgttgccaaatctgcctcccgctccccaaccccacacgaggacgac
cgcagatccaagtccaaggagaagagctctccgtccctctcaaggtctcgctcccgttct
agatcggcttctcaggattag
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