KEGG   Trematomus bernacchii (emerald rockcod): 117494375
Entry
117494375         CDS       T09643                                 
Name
(RefSeq) charged multivesicular body protein 4b-like
  KO
K12194  charged multivesicular body protein 4A/B
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben03250  Viral life cycle - HIV-1
tben03272  Virion - Hepatitis viruses
tben04144  Endocytosis
tben04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117494375
   03272 Virion - Hepatitis viruses
    117494375
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117494375
  09143 Cell growth and death
   04217 Necroptosis
    117494375
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tben04131]
    117494375
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tben04147]
    117494375
Membrane trafficking [BR:tben04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    117494375
Exosome [BR:tben04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117494375
  Exosomal proteins of other body fluids (saliva and urine)
   117494375
  Exosomal proteins of colorectal cancer cells
   117494375
SSDB
Motif
Pfam: Snf7 SYF2 Decapeptide TPR_Epg5_C DUF6437
Other DBs
NCBI-GeneID: 117494375
NCBI-ProteinID: XP_034001147
LinkDB
Position
Unknown
AA seq 223 aa
MSLFAKIFGGGGGKGGKGPSPQEAIQKLRETEEMLTKKQEFLEKKIEQELQIAKKNGTKN
KRAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKSAHE
NMDIDKVDDLMQDITEQQELAQEISDAISKPVGFGEEFDEDELLAELDELEQEELDKNLL
EIGGPENAPLPNVPSSSLPSRPAKKEEDEDDMEDLQRWAMEAM
NT seq 672 nt   +upstreamnt  +downstreamnt
atgtcgttgtttgctaagatatttggaggaggtggaggaaaaggaggaaagggaccgagc
ccacaggaggcgatccagaaactccgagagacggaggagatgctaacgaaaaaacaggaa
tttctagagaaaaagatcgaacaagaactgcaaatcgcgaagaaaaacggcacgaaaaac
aaaagagcggctctgcaggctttgaaaagaaagaagcgatatgagaagcagctcgcccag
atcgacggcacgctgtcgaccatcgagttccagagagaggctctggagaacgccaacacc
aacactgaagtgctcaagaacatgggcttcgctgccaaggccatgaagtctgcccatgaa
aacatggacattgacaaggtggacgacctgatgcaggacatcacagagcagcaggagctc
gcccaggagatctccgacgccatctctaaacctgtcggctttggagaggagtttgacgag
gacgagctgctggcggagctggacgagctggagcaggaggagctggacaaaaacctgctg
gagatcgggggtccggagaacgcccccctccccaacgtgccttcttcttcattaccttcc
agacctgccaagaaagaggaggacgaggacgacatggaggacctgcaacgctgggcgatg
gaagccatgtga

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